Os11g0565300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : EGF domain containing protein.
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Os11g0565300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : EGF domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 101.56 | 0.474 | 7.52 | 0.57 | 1.56 | 1.48 | 0.208 | -0.613 | 0.488 | 7.1 | 0.83 | 46 | 22 | -- |
| 102.6 | 0.472 | 7.52 | 0.584 | 1.59 | 1.47 | -0.228 | -- | 0.495 | 7.06 | 0.82 | 46 | 21.9 | -- |
| 101.63 | 0.47 | 7.52 | 0.578 | 1.57 | 1.46 | -- | -0.522 | 0.492 | 7.1 | 0.8144 | 46 | 21.9 | -- |
| 102.76 | 0.472 | 7.52 | 0.566 | 1.57 | 1.48 | -- | -- | 0.488 | 7.04 | 0.8142 | 46 | 21.9 | -- |
| 131.56 | 0.534 | 7.56 | 0.576 | -- | 2.75 | -- | -0.52 | 0.528 | -- | -2.587 | 52 | 21.7 | -- |
| 131.56 | 0.538 | 7.48 | 0.59 | 2.76 | -- | -0.525 | -- | 0.528 | 8.69 | -- | -- | -- | -- |
| 132.47 | 0.539 | 7.48 | 0.572 | 2.76 | -- | -- | -- | 0.528 | 8.69 | -- | -- | -- | -- |
| 132.47 | 0.536 | 7.56 | 0.573 | -- | 2.75 | -- | -- | 0.528 | -- | -12.42 | 60 | 21.8 | -- |
| 111.24 | 0.491 | 7.53 | -- | 1.56 | 1.46 | -- | -- | 0.432 | 7.09 | 0.8197 | 39 | 21.8 | -- |
| 563.36 | 1.11 | 7.55 | 0.578 | -- | -- | -- | -- | 0.551 | -- | -- | -- | -- | -- |
| 141.11 | 0.556 | 7.49 | -- | 2.76 | -- | -- | -- | 0.464 | 8.68 | -- | -- | -- | -- |
| 141.11 | 0.553 | 7.57 | -- | -- | 2.75 | -- | -- | 0.464 | -- | -17.4 | 76 | 22 | -- |
| 572.18 | 1.12 | 7.56 | -- | -- | -- | -- | -- | 0.487 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 99.65 | radiation | 1.0 | 30 | > th | dose independent | rect. | 5 | 11 |
| 35 | 102.25 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 5 | 10 |
| 36 | 102.25 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 5 | 10 |
| 37 | 102.50 | temperature | 10.0 | 90 | > th | dose independent | rect. | 5 | 10 |
| 38 | 102.50 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 5 | 10 |
| 39 | 102.50 | temperature | 10.0 | 90 | > th | dose independent | rect. | 15 | 14 |
| 40 | 102.58 | radiation | 1.0 | 30 | > th | dose independent | sin | 4 | NA |
| 41 | 102.60 | temperature | 30.0 | 90 | < th | dose independent | rect. | 5 | 10 |
| 42 | 102.63 | radiation | 40.0 | 90 | < th | dose independent | rect. | 15 | 14 |
| 43 | 102.65 | radiation | 1.0 | 30 | < th | dose independent | sin | 4 | NA |
| 57 | 102.91 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 5 | 10 |
| 61 | 103.38 | wind | 9.0 | 90 | < th | dose independent | rect. | 15 | 14 |
| 73 | 103.68 | humidity | 80.0 | 30 | > th | dose dependent | rect. | 1 | 4 |
| 76 | 103.90 | temperature | 20.0 | 30 | > th | dose independent | rect. | 1 | 4 |
| 78 | 103.96 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 15 | 14 |
| 79 | 103.96 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 15 | 14 |
| 80 | 104.02 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 10 |
| 81 | 104.02 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 10 |
| 85 | 104.27 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 15 | 14 |
| 87 | 104.36 | wind | 9.0 | 90 | < th | dose independent | rect. | 5 | 10 |
| 91 | 104.71 | radiation | 1.0 | 30 | < th | dose independent | rect. | 1 | 17 |
| 103 | 105.09 | radiation | 1.0 | 30 | < th | dose independent | rect. | 1 | 13 |
| 105 | 105.19 | radiation | 1.0 | 30 | < th | dose independent | rect. | 1 | 11 |
| 108 | 105.23 | radiation | 1.0 | 30 | < th | dose dependent | sin | 4 | NA |
| 112 | 105.31 | radiation | 1.0 | 30 | < th | dose independent | rect. | 1 | 7 |
| 118 | 105.36 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 14 | 15 |
| 124 | 105.48 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 10 |
| 125 | 105.48 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 3 | 10 |
| 126 | 105.48 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 3 | 10 |
| 127 | 105.48 | temperature | 10.0 | 270 | > th | dose independent | rect. | 13 | 14 |
| 137 | 105.69 | humidity | 50.0 | 90 | > th | dose independent | rect. | 5 | 10 |
| 139 | 105.74 | humidity | 80.0 | 30 | > th | dose independent | rect. | 1 | 4 |
| 162 | 105.97 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 13 | 14 |
| 163 | 105.97 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 13 | 14 |
| 164 | 105.98 | radiation | 1.0 | 30 | < th | dose independent | rect. | 1 | 5 |
| 181 | 106.24 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 1 | 4 |
| 208 | 106.78 | wind | 9.0 | 270 | < th | dose independent | rect. | 3 | 10 |
| 213 | 106.82 | wind | 9.0 | 270 | < th | dose independent | rect. | 13 | 14 |
| 232 | 107.06 | temperature | 30.0 | 30 | < th | dose independent | rect. | 5 | 20 |
| 233 | 107.08 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 1 | 4 |
| 234 | 107.12 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 1 | 13 |
| 240 | 107.20 | humidity | 50.0 | 270 | > th | dose independent | rect. | 3 | 10 |
| 242 | 107.23 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 1 | 11 |
| 247 | 107.29 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 1 | 17 |
| 250 | 107.35 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 1 | 7 |
| 263 | 107.56 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 1 | 5 |
| 282 | 107.68 | temperature | 10.0 | 30 | > th | dose independent | rect. | 1 | 4 |
| 284 | 107.68 | temperature | 30.0 | 30 | < th | dose independent | rect. | 1 | 4 |
| 285 | 107.68 | humidity | 50.0 | 30 | > th | dose independent | rect. | 1 | 4 |
| 288 | 107.68 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 1 | 4 |
| 289 | 107.68 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 1 | 4 |
| 296 | 107.68 | temperature | 10.0 | 30 | > th | dose independent | rect. | 5 | 20 |
| 301 | 107.69 | wind | 9.0 | 30 | < th | dose independent | rect. | 1 | 4 |
| 317 | 107.95 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 5 | 20 |
| 318 | 107.95 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 5 | 20 |
| 320 | 107.97 | humidity | 50.0 | 10 | > th | dose independent | rect. | 16 | 13 |
| 354 | 108.19 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 5 | 10 |
| 357 | 108.22 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 1 | 18 |
| 358 | 108.24 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 5 | 20 |
| 365 | 108.28 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 1 | 4 |
| 366 | 108.28 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 1 | 4 |
| 442 | 108.69 | wind | 7.0 | 720 | < th | dose independent | rect. | 19 | 11 |
| 443 | 108.71 | wind | 9.0 | 30 | < th | dose independent | rect. | 5 | 20 |
| 456 | 108.79 | humidity | 50.0 | 30 | > th | dose independent | rect. | 5 | 20 |
| 480 | 108.94 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 15 | 14 |
| 492 | 108.98 | wind | 1.0 | 90 | > th | dose independent | rect. | 5 | 10 |
| 494 | 108.98 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 23 | 18 |
| 495 | 108.99 | humidity | 80.0 | 270 | > th | dose independent | rect. | 23 | 4 |
| 503 | 109.04 | wind | 9.0 | 30 | < th | dose dependent | rect. | 1 | 4 |
| 513 | 109.13 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 18 | 15 |
| 540 | 109.23 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 5 | 20 |
| 583 | 109.47 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 3 | 21 |
| 594 | 109.54 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 13 | 14 |
| 658 | 109.94 | temperature | 15.0 | 270 | > th | dose independent | rect. | 7 | 11 |
| 713 | 110.29 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 5 | 20 |
| 734 | 110.45 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 4 | 19 |
| 792 | 110.63 | wind | 7.0 | 720 | < th | dose independent | rect. | 18 | 13 |
| 798 | 110.68 | radiation | 1.0 | 270 | < th | dose independent | rect. | 3 | 21 |
| 829 | 110.74 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 24 | 2 |
| 830 | 110.74 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 24 | 2 |
| 841 | 110.76 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 7 | 11 |
| 854 | 110.77 | temperature | 10.0 | 270 | > th | dose independent | rect. | 2 | 22 |
| 921 | 110.90 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 22 |
| 922 | 110.90 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 2 | 22 |
| 981 | 111.11 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 5 | 8 |