Os11g0562100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Terpene synthase family protein.
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Os11g0562100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Terpene synthase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 70.07 | 0.393 | 10.2 | -1.68 | 0.529 | 1.18 | 0.236 | -0.198 | 0.328 | 2.64 | 21.8 | 1520 | -- | -- |
| 70.16 | 0.39 | 10.2 | -1.62 | 0.528 | 1.19 | 0.227 | -- | 0.341 | 2.64 | 21.79 | 1519 | -- | -- |
| 70.27 | 0.39 | 10.2 | -1.68 | 0.528 | 1.18 | -- | -0.194 | 0.326 | 2.61 | 21.8 | 1519 | -- | -- |
| 70.35 | 0.391 | 10.2 | -1.62 | 0.529 | 1.18 | -- | -- | 0.341 | 2.57 | 21.8 | 1519 | -- | -- |
| 81.39 | 0.42 | 10.2 | -1.59 | -- | 1.13 | -- | -0.232 | 0.325 | -- | 22.07 | 1083 | -- | -- |
| 114.54 | 0.502 | 10.1 | -1.13 | 0.555 | -- | 0.15 | -- | 0.701 | 2.62 | -- | -- | -- | -- |
| 114.61 | 0.501 | 10.1 | -1.13 | 0.555 | -- | -- | -- | 0.7 | 2.58 | -- | -- | -- | -- |
| 81.5 | 0.42 | 10.2 | -1.54 | -- | 1.16 | -- | -- | 0.344 | -- | 22 | 1100 | -- | -- |
| 123.63 | 0.518 | 10.1 | -- | 0.463 | 0.681 | -- | -- | 0.596 | 3.4 | 22.3 | 865 | -- | -- |
| 132.68 | 0.538 | 10.1 | -1.11 | -- | -- | -- | -- | 0.714 | -- | -- | -- | -- | -- |
| 148.43 | 0.57 | 10.1 | -- | 0.533 | -- | -- | -- | 0.826 | 2.55 | -- | -- | -- | -- |
| 135.14 | 0.541 | 10.1 | -- | -- | 0.786 | -- | -- | 0.594 | -- | 22.4 | 979 | -- | -- |
| 165.13 | 0.6 | 10.1 | -- | -- | -- | -- | -- | 0.837 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 72.38 | temperature | 25 | 720 | < th | dose dependent | rect. | 2 | 23 |
| 2 | 72.39 | temperature | 25 | 720 | < th | dose dependent | rect. | 17 | 22 |
| 19 | 72.63 | temperature | 25 | 720 | < th | dose dependent | rect. | 4 | 23 |
| 21 | 72.67 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 26 | 72.74 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 2 |
| 33 | 72.82 | temperature | 25 | 1440 | < th | dose dependent | rect. | 18 | 6 |
| 35 | 72.83 | temperature | 25 | 720 | < th | dose dependent | rect. | 8 | 23 |
| 38 | 72.88 | temperature | 25 | 720 | < th | dose dependent | rect. | 6 | 23 |
| 40 | 72.90 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 8 |
| 91 | 73.38 | temperature | 25 | 1440 | < th | dose dependent | sin | 14 | NA |
| 345 | 74.67 | temperature | 10 | 1440 | > th | dose dependent | rect. | 20 | 10 |
| 380 | 74.76 | temperature | 15 | 720 | > th | dose dependent | rect. | 17 | 18 |
| 381 | 74.77 | temperature | 10 | 1440 | > th | dose dependent | rect. | 21 | 3 |
| 387 | 74.78 | temperature | 10 | 1440 | > th | dose dependent | rect. | 20 | 6 |
| 409 | 74.85 | temperature | 15 | 1440 | > th | dose dependent | rect. | 23 | 1 |
| 600 | 75.37 | temperature | 10 | 1440 | > th | dose dependent | sin | 11 | NA |
| 787 | 75.84 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 6 |
| 799 | 75.89 | temperature | 25 | 1440 | < th | dose dependent | rect. | 4 | 3 |
| 825 | 75.97 | temperature | 10 | 1440 | > th | dose dependent | rect. | 4 | 2 |
| 894 | 76.11 | temperature | 10 | 1440 | > th | dose dependent | rect. | 1 | 5 |