Os11g0559600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os11g0559600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 225.36 | 0.705 | 3.64 | -0.489 | 0.254 | 3.63 | -1.17 | -3.99 | 0.148 | 10 | 19.67 | 4899 | -- | -- |
| 228.58 | 0.704 | 3.73 | -0.611 | 0.202 | 5.44 | -1.17 | -- | 0.159 | 10.8 | 19.13 | 4943 | -- | -- |
| 230.39 | 0.707 | 3.65 | -0.542 | 0.257 | 3.68 | -- | -3.99 | 0.138 | 9.71 | 19.6 | 4975 | -- | -- |
| 232.63 | 0.71 | 3.74 | -0.569 | 0.255 | 5.49 | -- | -- | 0.108 | 9.49 | 19.09 | 4979 | -- | -- |
| 234.21 | 0.713 | 3.65 | -0.534 | -- | 3.73 | -- | -3.92 | 0.144 | -- | 19.6 | 4987 | -- | -- |
| 463.99 | 1.01 | 3.9 | -2.71 | 0.289 | -- | -1.22 | -- | -0.604 | 10.7 | -- | -- | -- | -- |
| 470.1 | 1.02 | 3.9 | -2.76 | 0.3 | -- | -- | -- | -0.609 | 10.2 | -- | -- | -- | -- |
| 236.4 | 0.716 | 3.75 | -0.59 | -- | 5.51 | -- | -- | 0.096 | -- | 19.06 | 4987 | -- | -- |
| 238.21 | 0.719 | 3.72 | -- | 0.243 | 5.93 | -- | -- | 0.223 | 9.4 | 19.32 | 5100 | -- | -- |
| 475.57 | 1.02 | 3.91 | -2.76 | -- | -- | -- | -- | -0.609 | -- | -- | -- | -- | -- |
| 670.71 | 1.21 | 3.83 | -- | 0.318 | -- | -- | -- | -0.301 | 10.8 | -- | -- | -- | -- |
| 241.7 | 0.724 | 3.72 | -- | -- | 5.92 | -- | -- | 0.228 | -- | 19.35 | 5101 | -- | -- |
| 676.96 | 1.21 | 3.84 | -- | -- | -- | -- | -- | -0.303 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 224.87 | humidity | 60 | 43200 | < th | dose dependent | rect. | 5 | 5 |
| 4 | 225.18 | humidity | 60 | 43200 | < th | dose dependent | rect. | 8 | 2 |
| 22 | 226.31 | humidity | 50 | 43200 | < th | dose dependent | sin | 7 | NA |
| 116 | 228.99 | humidity | 80 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 121 | 229.22 | humidity | 70 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 134 | 229.55 | humidity | 50 | 43200 | > th | dose independent | rect. | 4 | 6 |
| 137 | 229.58 | humidity | 50 | 43200 | > th | dose independent | rect. | 22 | 13 |
| 138 | 229.59 | humidity | 50 | 43200 | > th | dose independent | rect. | 24 | 11 |
| 142 | 229.61 | humidity | 50 | 43200 | > th | dose independent | rect. | 2 | 9 |
| 149 | 229.72 | humidity | 50 | 43200 | < th | dose independent | rect. | 4 | 7 |
| 171 | 229.88 | humidity | 70 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 184 | 229.99 | temperature | 20 | 4320 | < th | dose dependent | rect. | 14 | 15 |
| 227 | 230.57 | humidity | 70 | 43200 | > th | dose independent | rect. | 3 | 5 |
| 256 | 230.77 | temperature | 20 | 4320 | < th | dose dependent | sin | 15 | NA |
| 307 | 231.16 | humidity | 70 | 43200 | < th | dose independent | rect. | 4 | 4 |
| 331 | 231.41 | humidity | 50 | 43200 | < th | dose dependent | rect. | 12 | 23 |
| 340 | 231.48 | humidity | 50 | 43200 | < th | dose independent | sin | 8 | NA |
| 366 | 231.60 | humidity | 50 | 43200 | < th | dose dependent | no | NA | NA |
| 396 | 231.69 | humidity | 50 | 43200 | > th | dose independent | sin | 8 | NA |
| 397 | 231.71 | temperature | 20 | 4320 | < th | dose dependent | rect. | 19 | 6 |
| 464 | 232.11 | radiation | 1 | 14400 | > th | dose independent | rect. | 10 | 2 |
| 516 | 232.52 | humidity | 80 | 43200 | < th | dose independent | rect. | 3 | 2 |
| 520 | 232.56 | humidity | 50 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 523 | 232.60 | temperature | 25 | 4320 | < th | dose dependent | rect. | 15 | 3 |
| 535 | 232.66 | temperature | 25 | 4320 | < th | dose dependent | rect. | 14 | 5 |
| 537 | 232.68 | radiation | 1 | 14400 | < th | dose independent | rect. | 10 | 2 |
| 539 | 232.68 | radiation | 1 | 14400 | < th | dose dependent | rect. | 10 | 2 |
| 615 | 233.36 | humidity | 50 | 43200 | < th | dose dependent | rect. | 13 | 1 |
| 660 | 233.78 | humidity | 50 | 43200 | > th | dose independent | rect. | 16 | 18 |
| 665 | 233.85 | humidity | 50 | 43200 | < th | dose independent | rect. | 16 | 19 |
| 688 | 234.08 | temperature | 20 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 689 | 234.08 | radiation | 1 | 14400 | < th | dose dependent | rect. | 7 | 5 |
| 704 | 234.21 | radiation | 1 | 14400 | < th | dose dependent | rect. | 7 | 1 |
| 722 | 234.37 | temperature | 20 | 4320 | < th | dose dependent | rect. | 23 | 1 |
| 739 | 234.44 | radiation | 1 | 14400 | > th | dose independent | rect. | 7 | 5 |
| 742 | 234.48 | radiation | 1 | 14400 | < th | dose independent | rect. | 7 | 5 |
| 782 | 234.87 | radiation | 1 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 794 | 234.93 | radiation | 1 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 901 | 235.71 | humidity | 80 | 43200 | > th | dose independent | rect. | 3 | 1 |