Os11g0558500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os11g0558500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 66.34 | 0.383 | 7.49 | 2.61 | 0.52 | 0.0715 | -0.537 | 2.96 | 0.536 | 7.62 | 0.2626 | 4680 | -- | -- |
| 64.21 | 0.373 | 7.54 | 2.26 | 0.494 | 0.87 | -0.305 | -- | 0.571 | 8.01 | 0.9363 | 23541 | -- | -- |
| 67.07 | 0.381 | 7.49 | 2.6 | 0.525 | 0.084 | -- | 2.95 | 0.542 | 7.86 | 0.2695 | 4680 | -- | -- |
| 64.52 | 0.374 | 7.54 | 2.26 | 0.518 | 0.855 | -- | -- | 0.59 | 7.67 | 0.949 | 23945 | -- | -- |
| 81.68 | 0.421 | 7.5 | 2.62 | -- | 0.0332 | -- | 3.05 | 0.543 | -- | 0.3059 | 4655 | -- | -- |
| 80.69 | 0.421 | 7.56 | 2.77 | 0.516 | -- | -0.544 | -- | 0.503 | 7.51 | -- | -- | -- | -- |
| 81.46 | 0.423 | 7.56 | 2.76 | 0.514 | -- | -- | -- | 0.504 | 7.73 | -- | -- | -- | -- |
| 79.21 | 0.415 | 7.55 | 2.26 | -- | 0.858 | -- | -- | 0.595 | -- | 0.9401 | 24274 | -- | -- |
| 131.28 | 0.534 | 7.53 | -- | 0.5 | 1.61 | -- | -- | 0.576 | 7.14 | 1.374 | 47224 | -- | -- |
| 95.74 | 0.457 | 7.57 | 2.77 | -- | -- | -- | -- | 0.512 | -- | -- | -- | -- | -- |
| 282.29 | 0.786 | 7.63 | -- | 0.538 | -- | -- | -- | 0.197 | 7.38 | -- | -- | -- | -- |
| 146.99 | 0.565 | 7.55 | -- | -- | 1.61 | -- | -- | 0.604 | -- | 1.377 | 47520 | -- | -- |
| 297.7 | 0.805 | 7.64 | -- | -- | -- | -- | -- | 0.205 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 64.55 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 20 | 8 |
| 2 | 65.24 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 7 |
| 3 | 65.31 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 11 |
| 7 | 65.34 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 24 | 65.47 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 25 | 65.47 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 35 | 65.55 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 38 | 65.57 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 6 |
| 43 | 65.60 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 6 |
| 45 | 65.60 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 6 |
| 47 | 65.61 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 21 | 21 |
| 50 | 65.63 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 17 | NA |
| 96 | 65.80 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 11 | 12 |
| 103 | 65.83 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 11 | 12 |
| 106 | 65.83 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 11 | 12 |
| 116 | 65.87 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 20 | 5 |
| 176 | 66.11 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 24 | 4 |
| 243 | 66.34 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 258 | 66.39 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 18 | NA |
| 264 | 66.40 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 18 | NA |
| 266 | 66.40 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 18 | NA |
| 421 | 66.79 | wind | 7.0 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 440 | 66.82 | wind | 7.0 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 455 | 66.86 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 21 |
| 476 | 66.88 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 15 | 22 |
| 513 | 66.94 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 2 | 16 |
| 587 | 67.04 | precipitation | 0.1 | 14400 | > th | dose dependent | no | NA | NA |
| 699 | 67.23 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 18 | 3 |
| 723 | 67.28 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 5 |
| 724 | 67.28 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 5 |
| 725 | 67.28 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 11 | 7 |
| 726 | 67.28 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 5 |
| 729 | 67.29 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 11 | 7 |
| 733 | 67.29 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 11 | 7 |
| 737 | 67.30 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 763 | 67.37 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 19 | 3 |
| 923 | 67.92 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 21 | 21 |
| 925 | 67.92 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 21 | 21 |
| 948 | 68.00 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 21 | 21 |
| 973 | 68.05 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 17 | 1 |