Os11g0558200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to P-type R2R3 Myb protein (Fragment).
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Os11g0558200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to P-type R2R3 Myb protein (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 92.59 | 0.452 | 10.5 | -0.501 | 0.848 | 0.805 | 0.191 | 2.76 | 0.00844 | 8.32 | 27.96 | 1083 | -- | -- |
| 94.75 | 0.453 | 10.6 | -0.84 | 0.782 | 1.01 | 0.0857 | -- | 0.0689 | 8.2 | 30.75 | 1056 | -- | -- |
| 92.68 | 0.448 | 10.5 | -0.511 | 0.852 | 0.812 | -- | 2.7 | 0.00851 | 8.32 | 28.03 | 1076 | -- | -- |
| 93.39 | 0.45 | 10.6 | -1 | 0.866 | 1.1 | -- | -- | -0.0345 | 8.32 | 28.29 | 1082 | -- | -- |
| 128.01 | 0.527 | 10.6 | -0.554 | -- | 0.677 | -- | 2.34 | 0.0535 | -- | 29.46 | 1181 | -- | -- |
| 139.7 | 0.554 | 10.6 | -0.728 | 0.744 | -- | 0.0576 | -- | -0.126 | 7.51 | -- | -- | -- | -- |
| 139.71 | 0.554 | 10.6 | -0.727 | 0.744 | -- | -- | -- | -0.126 | 7.52 | -- | -- | -- | -- |
| 128.79 | 0.529 | 10.6 | -0.955 | -- | 0.919 | -- | -- | 0.0292 | -- | 29.28 | 1204 | -- | -- |
| 118.35 | 0.507 | 10.6 | -- | 0.796 | 0.888 | -- | -- | 0.089 | 8.18 | 29.28 | 1075 | -- | -- |
| 169.31 | 0.608 | 10.6 | -0.715 | -- | -- | -- | -- | -0.115 | -- | -- | -- | -- | -- |
| 153.62 | 0.58 | 10.6 | -- | 0.737 | -- | -- | -- | -0.0453 | 7.59 | -- | -- | -- | -- |
| 151.61 | 0.573 | 10.6 | -- | -- | 0.789 | -- | -- | 0.128 | -- | 31.1 | 1136 | -- | -- |
| 182.81 | 0.631 | 10.6 | -- | -- | -- | -- | -- | -0.0353 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 80.78 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 12 | 17 |
| 30 | 87.83 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 22 | 20 |
| 33 | 88.29 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 22 | 8 |
| 41 | 89.01 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 14 | 16 |
| 48 | 89.86 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 2 | 17 |
| 79 | 91.79 | temperature | 30.0 | 270 | < th | dose independent | rect. | 17 | 6 |
| 84 | 92.02 | humidity | 70.0 | 270 | > th | dose independent | rect. | 17 | 6 |
| 86 | 92.04 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 6 | 16 |
| 97 | 92.46 | temperature | 20.0 | 270 | > th | dose independent | rect. | 12 | 17 |
| 132 | 93.44 | humidity | 60.0 | 270 | > th | dose independent | rect. | 16 | 8 |
| 138 | 93.62 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 13 | 16 |
| 139 | 93.62 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 13 | 16 |
| 149 | 93.90 | radiation | 1.0 | 270 | < th | dose dependent | sin | 20 | NA |
| 170 | 94.38 | temperature | 30.0 | 270 | < th | dose independent | rect. | 17 | 17 |
| 173 | 94.45 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 10 | 8 |
| 181 | 94.63 | humidity | 70.0 | 270 | > th | dose independent | rect. | 17 | 18 |
| 189 | 94.72 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 2 | 18 |
| 200 | 95.00 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 16 | 7 |
| 218 | 95.40 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 17 | 6 |
| 222 | 95.47 | radiation | 1.0 | 270 | < th | dose independent | rect. | 6 | 17 |
| 223 | 95.50 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 7 | 16 |
| 224 | 95.50 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 24 | 20 |
| 229 | 95.55 | radiation | 1.0 | 270 | < th | dose independent | sin | 20 | NA |
| 232 | 95.61 | radiation | 10.0 | 270 | < th | dose independent | rect. | 16 | 8 |
| 233 | 95.62 | humidity | 70.0 | 270 | > th | dose independent | rect. | 5 | 18 |
| 234 | 95.63 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 15 | 8 |
| 238 | 95.68 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 5 | 18 |
| 251 | 95.92 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 17 | 2 |
| 265 | 96.07 | temperature | 30.0 | 270 | < th | dose independent | rect. | 5 | 18 |
| 267 | 96.10 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 23 | 18 |
| 268 | 96.10 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 23 | 18 |
| 284 | 96.29 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 16 | 17 |
| 305 | 96.52 | radiation | 1.0 | 270 | < th | dose independent | rect. | 17 | 6 |
| 320 | 96.70 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 13 | 11 |
| 336 | 96.83 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 15 | 9 |
| 338 | 96.84 | wind | 7.0 | 270 | < th | dose independent | rect. | 24 | 17 |
| 386 | 97.25 | temperature | 25.0 | 720 | > th | dose dependent | sin | 14 | NA |
| 393 | 97.29 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 17 | 6 |
| 397 | 97.29 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 5 | 20 |
| 415 | 97.45 | temperature | 15.0 | 270 | > th | dose independent | rect. | 24 | 17 |
| 424 | 97.54 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 11 | 7 |
| 425 | 97.54 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 11 | 7 |
| 427 | 97.56 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 21 | 22 |
| 429 | 97.56 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 21 | 22 |
| 446 | 97.69 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 13 | 6 |
| 476 | 97.83 | radiation | 1.0 | 270 | > th | dose independent | sin | 19 | NA |
| 499 | 97.98 | temperature | 20.0 | 90 | > th | dose independent | rect. | 2 | 17 |
| 508 | 98.05 | radiation | 1.0 | 270 | > th | dose independent | rect. | 11 | 8 |
| 524 | 98.08 | temperature | 15.0 | 270 | > th | dose independent | rect. | 17 | 7 |
| 534 | 98.16 | humidity | 50.0 | 270 | > th | dose independent | rect. | 5 | 7 |
| 538 | 98.20 | humidity | 50.0 | 270 | > th | dose independent | rect. | 6 | 16 |
| 544 | 98.25 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 23 | 18 |
| 596 | 98.54 | wind | 9.0 | 270 | < th | dose independent | rect. | 17 | 6 |
| 616 | 98.64 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 5 | 22 |
| 621 | 98.68 | temperature | 15.0 | 270 | > th | dose independent | rect. | 10 | 8 |
| 634 | 98.76 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 18 | 16 |
| 651 | 98.88 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 13 | 6 |
| 653 | 98.88 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 13 | 6 |
| 663 | 98.94 | temperature | 10.0 | 270 | > th | dose independent | rect. | 5 | 8 |
| 664 | 98.94 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 5 | 8 |
| 665 | 98.94 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 5 | 8 |
| 666 | 98.94 | temperature | 10.0 | 270 | > th | dose independent | rect. | 13 | 16 |
| 670 | 98.97 | wind | 9.0 | 270 | < th | dose independent | rect. | 13 | 16 |
| 675 | 98.99 | wind | 9.0 | 270 | < th | dose independent | rect. | 10 | 8 |
| 716 | 99.16 | temperature | 20.0 | 10 | > th | dose independent | rect. | 14 | 17 |
| 728 | 99.20 | temperature | 30.0 | 720 | < th | dose independent | rect. | 15 | 15 |
| 751 | 99.30 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 8 |
| 758 | 99.30 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 8 |
| 765 | 99.33 | wind | 9.0 | 270 | < th | dose dependent | rect. | 22 | 8 |
| 770 | 99.35 | wind | 9.0 | 270 | < th | dose independent | rect. | 5 | 8 |
| 779 | 99.42 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 10 | 8 |
| 780 | 99.42 | temperature | 10.0 | 270 | > th | dose independent | rect. | 18 | 16 |
| 784 | 99.45 | wind | 9.0 | 270 | < th | dose independent | rect. | 18 | 16 |
| 796 | 99.49 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 18 | 4 |
| 818 | 99.60 | temperature | 20.0 | 270 | > th | dose independent | rect. | 23 | 6 |
| 852 | 99.78 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 17 | 6 |
| 864 | 99.82 | radiation | 40.0 | 270 | < th | dose independent | rect. | 18 | 16 |
| 878 | 99.90 | temperature | 30.0 | 720 | > th | dose independent | sin | 12 | NA |