Os11g0557800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os11g0557800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 23.45 | 0.228 | 2.76 | -0.0417 | 0.163 | 0.154 | 1.07 | 0.871 | 0.032 | 14.5 | 7.03 | 288 | -- | -- |
| 24.09 | 0.229 | 2.76 | -0.0378 | 0.172 | 0.168 | 0.245 | -- | 0.0344 | 15.1 | 7.119 | 348 | -- | -- |
| 24.27 | 0.229 | 2.76 | -0.049 | 0.17 | 0.163 | -- | -0.0404 | 0.036 | 13.9 | 7.118 | 334 | -- | -- |
| 24.21 | 0.229 | 2.76 | -0.0331 | 0.174 | 0.177 | -- | -- | 0.0342 | 14.7 | 7.06 | 348 | -- | -- |
| 24.6 | 0.231 | 2.76 | -0.0173 | -- | 0.0396 | -- | -0.0687 | 0.0337 | -- | 19.15 | 403 | -- | -- |
| 24.43 | 0.232 | 2.76 | -0.0236 | 0.00199 | -- | 0.3 | -- | 0.0276 | 16.9 | -- | -- | -- | -- |
| 24.66 | 0.233 | 2.76 | -0.0226 | 0.00544 | -- | -- | -- | 0.0291 | 13.8 | -- | -- | -- | -- |
| 24.6 | 0.231 | 2.76 | -0.0184 | -- | 0.0389 | -- | -- | 0.033 | -- | 18.57 | 402 | -- | -- |
| 24.21 | 0.229 | 2.76 | -- | 0.216 | 0.205 | -- | -- | 0.0377 | 14.6 | 7.07 | 334 | -- | -- |
| 24.66 | 0.232 | 2.76 | -0.0229 | -- | -- | -- | -- | 0.0289 | -- | -- | -- | -- | -- |
| 24.67 | 0.232 | 2.76 | -- | 0.00585 | -- | -- | -- | 0.0316 | 13.9 | -- | -- | -- | -- |
| 24.61 | 0.231 | 2.76 | -- | -- | 0.039 | -- | -- | 0.0335 | -- | 18.57 | 402 | -- | -- |
| 24.67 | 0.232 | 2.76 | -- | -- | -- | -- | -- | 0.0315 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 17.82 | humidity | 90.0 | 90 | > th | dose independent | rect. | 14 | 1 |
| 8 | 17.82 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 14 | 1 |
| 15 | 17.84 | radiation | 1.0 | 10 | < th | dose independent | rect. | 15 | 1 |
| 57 | 18.52 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 15 | 1 |
| 73 | 18.85 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 14 | 1 |
| 80 | 19.17 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 14 | 1 |
| 135 | 20.39 | temperature | 25.0 | 90 | < th | dose independent | rect. | 14 | 1 |
| 136 | 20.39 | temperature | 25.0 | 10 | < th | dose independent | rect. | 15 | 1 |
| 237 | 21.16 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 13 | 1 |
| 241 | 21.16 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 13 | 1 |
| 271 | 21.34 | atmosphere | 1010.0 | 270 | > th | dose independent | rect. | 12 | 1 |
| 284 | 21.38 | radiation | 10.0 | 270 | < th | dose independent | rect. | 12 | 1 |
| 330 | 21.70 | atmosphere | 1005.0 | 90 | > th | dose dependent | rect. | 15 | 1 |
| 385 | 21.94 | wind | 3.0 | 10 | < th | dose dependent | rect. | 15 | 1 |
| 463 | 22.19 | wind | 3.0 | 90 | < th | dose independent | rect. | 14 | 1 |
| 502 | 22.36 | wind | 3.0 | 10 | < th | dose independent | rect. | 15 | 1 |
| 558 | 22.49 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 15 | 1 |
| 655 | 22.69 | atmosphere | 1005.0 | 270 | > th | dose dependent | rect. | 12 | 4 |
| 710 | 22.79 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 19 | 21 |
| 735 | 22.84 | radiation | 10.0 | 270 | < th | dose independent | rect. | 11 | 18 |
| 736 | 22.84 | atmosphere | 1010.0 | 720 | > th | dose dependent | rect. | 4 | 1 |
| 747 | 22.86 | wind | 5.0 | 90 | < th | dose dependent | rect. | 14 | 1 |
| 811 | 22.94 | radiation | 30.0 | 43200 | < th | dose dependent | rect. | 23 | 1 |
| 848 | 22.98 | wind | 1.0 | 30 | > th | dose independent | rect. | 22 | 1 |
| 849 | 22.98 | humidity | 80.0 | 30 | > th | dose independent | rect. | 22 | 1 |
| 857 | 22.98 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 22 | 1 |
| 858 | 22.98 | radiation | 20.0 | 4320 | < th | dose dependent | rect. | 23 | 1 |
| 866 | 22.99 | wind | 3.0 | 30 | < th | dose independent | rect. | 22 | 1 |
| 870 | 22.99 | wind | 9.0 | 1440 | < th | dose independent | rect. | 23 | 1 |
| 871 | 22.99 | temperature | 25.0 | 10 | > th | dose independent | rect. | 22 | 1 |
| 872 | 22.99 | temperature | 10.0 | 30 | > th | dose independent | rect. | 22 | 1 |
| 876 | 22.99 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 879 | 22.99 | temperature | 30.0 | 30 | < th | dose independent | rect. | 22 | 1 |
| 880 | 22.99 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 23 | 1 |
| 884 | 22.99 | humidity | 50.0 | 30 | > th | dose independent | rect. | 22 | 1 |
| 887 | 22.99 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 897 | 22.99 | humidity | 90.0 | 30 | < th | dose independent | rect. | 22 | 1 |
| 898 | 22.99 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 22 | 1 |
| 901 | 22.99 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 902 | 22.99 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 22 | 1 |
| 904 | 22.99 | radiation | 1.0 | 30 | < th | dose independent | rect. | 22 | 1 |
| 909 | 22.99 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 23 | 1 |
| 929 | 22.99 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 22 | 1 |
| 931 | 22.99 | temperature | 10.0 | 30 | > th | dose independent | rect. | 23 | 23 |
| 932 | 22.99 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 24 | 23 |
| 936 | 22.99 | wind | 5.0 | 30 | < th | dose dependent | rect. | 22 | 1 |
| 939 | 22.99 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 22 | 1 |
| 944 | 22.99 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 22 | 1 |
| 948 | 22.99 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 22 | 1 |
| 950 | 22.99 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 22 | 1 |
| 955 | 22.99 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 23 | 1 |
| 963 | 22.99 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 22 | 1 |
| 972 | 23.00 | radiation | 10.0 | 270 | < th | dose independent | rect. | 20 | 20 |
| 979 | 23.00 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 22 | 1 |
| 990 | 23.01 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 23 | 23 |
| 991 | 23.01 | wind | 1.0 | 30 | > th | dose dependent | rect. | 22 | 1 |
| 994 | 23.01 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 22 | 1 |
| 995 | 23.01 | atmosphere | 1010.0 | 1440 | > th | dose dependent | rect. | 16 | 1 |