Os11g0557300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : BSD domain containing protein.
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Os11g0557300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : BSD domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 67.85 | 0.387 | 8.91 | -0.185 | 0.47 | -0.63 | -0.495 | -0.732 | 0.101 | 23.4 | 19.8 | 402 | -- | -- |
| 69.07 | 0.387 | 8.93 | -0.291 | 0.442 | -0.528 | -0.379 | -- | 0.064 | 23.3 | 20 | 536 | -- | -- |
| 68.73 | 0.386 | 8.91 | -0.168 | 0.476 | -0.598 | -- | -0.658 | 0.105 | 22.9 | 19.83 | 400 | -- | -- |
| 69.43 | 0.388 | 8.93 | -0.269 | 0.445 | -0.515 | -- | -- | 0.0764 | 22.7 | 20.06 | 595 | -- | -- |
| 80.31 | 0.417 | 8.91 | -0.221 | -- | -0.698 | -- | -0.449 | 0.0682 | -- | 20 | 696 | -- | -- |
| 76.23 | 0.409 | 8.91 | -0.0973 | 0.502 | -- | -0.243 | -- | 0.176 | 22.7 | -- | -- | -- | -- |
| 76.42 | 0.409 | 8.91 | -0.0863 | 0.506 | -- | -- | -- | 0.178 | 22.4 | -- | -- | -- | -- |
| 80.71 | 0.418 | 8.93 | -0.314 | -- | -0.65 | -- | -- | 0.0489 | -- | 20 | 715 | -- | -- |
| 71.12 | 0.393 | 8.92 | -- | 0.454 | -0.43 | -- | -- | 0.12 | 22.6 | 20.05 | 592 | -- | -- |
| 92.07 | 0.448 | 8.9 | -0.0779 | -- | -- | -- | -- | 0.18 | -- | -- | -- | -- | -- |
| 76.61 | 0.409 | 8.91 | -- | 0.505 | -- | -- | -- | 0.188 | 22.4 | -- | -- | -- | -- |
| 83.04 | 0.424 | 8.91 | -- | -- | -0.558 | -- | -- | 0.0957 | -- | 20 | 715 | -- | -- |
| 92.23 | 0.448 | 8.89 | -- | -- | -- | -- | -- | 0.188 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 61.72 | wind | 9.0 | 4320 | < th | dose independent | rect. | 17 | 4 |
| 3 | 61.82 | wind | 7.0 | 4320 | > th | dose independent | rect. | 17 | 4 |
| 4 | 61.82 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 17 | 4 |
| 13 | 62.82 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 17 | 10 |
| 26 | 63.25 | wind | 5.0 | 4320 | < th | dose independent | rect. | 20 | 2 |
| 28 | 63.33 | wind | 5.0 | 4320 | > th | dose independent | rect. | 17 | 9 |
| 33 | 63.41 | wind | 9.0 | 4320 | < th | dose independent | rect. | 16 | 9 |
| 39 | 63.49 | wind | 9.0 | 4320 | < th | dose independent | rect. | 17 | 2 |
| 40 | 63.50 | wind | 7.0 | 4320 | > th | dose independent | rect. | 17 | 1 |
| 41 | 63.50 | wind | 9.0 | 4320 | < th | dose independent | rect. | 16 | 12 |
| 52 | 63.59 | wind | 5.0 | 4320 | > th | dose independent | rect. | 20 | 2 |
| 53 | 63.60 | temperature | 20.0 | 720 | > th | dose independent | rect. | 12 | 14 |
| 74 | 63.80 | wind | 9.0 | 4320 | > th | dose independent | rect. | 17 | 11 |
| 84 | 63.87 | temperature | 20.0 | 720 | > th | dose independent | rect. | 6 | 20 |
| 99 | 63.96 | wind | 5.0 | 720 | > th | dose independent | rect. | 21 | 1 |
| 135 | 64.17 | temperature | 20.0 | 720 | > th | dose independent | sin | 17 | NA |
| 143 | 64.25 | temperature | 20.0 | 720 | > th | dose independent | rect. | 14 | 11 |
| 202 | 64.63 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 21 | 11 |
| 242 | 64.89 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 12 | 2 |
| 252 | 64.93 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 281 | 65.07 | wind | 3.0 | 720 | > th | dose dependent | rect. | 21 | 1 |
| 286 | 65.12 | wind | 5.0 | 4320 | > th | dose dependent | sin | 14 | NA |
| 301 | 65.20 | wind | 5.0 | 4320 | > th | dose independent | sin | 14 | NA |
| 314 | 65.30 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 10 | 4 |
| 329 | 65.37 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 10 | 1 |
| 330 | 65.37 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 10 | 1 |
| 341 | 65.42 | radiation | 10.0 | 720 | < th | dose dependent | rect. | 13 | 6 |
| 345 | 65.43 | wind | 5.0 | 4320 | < th | dose independent | sin | 14 | NA |
| 346 | 65.43 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 9 | 3 |
| 347 | 65.43 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 9 | 3 |
| 353 | 65.46 | radiation | 10.0 | 720 | < th | dose dependent | rect. | 11 | 8 |
| 408 | 65.65 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 1 | 7 |
| 440 | 65.74 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 1 | 8 |
| 466 | 65.84 | radiation | 20.0 | 720 | < th | dose dependent | rect. | 11 | 20 |
| 473 | 65.87 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 479 | 65.87 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 1 | 10 |
| 487 | 65.90 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 23 | 8 |
| 499 | 65.94 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 502 | 65.95 | temperature | 20.0 | 720 | > th | dose independent | rect. | 19 | 7 |
| 511 | 65.99 | wind | 9.0 | 4320 | > th | dose independent | sin | 13 | NA |
| 544 | 66.06 | radiation | 10.0 | 720 | < th | dose dependent | sin | 21 | NA |
| 546 | 66.07 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 3 | 5 |
| 547 | 66.08 | radiation | 10.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 549 | 66.08 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 23 | 16 |
| 553 | 66.09 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 581 | 66.14 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 1 | 10 |
| 582 | 66.15 | wind | 1.0 | 30 | > th | dose independent | rect. | 11 | 14 |
| 593 | 66.17 | radiation | 20.0 | 720 | < th | dose dependent | rect. | 11 | 17 |
| 602 | 66.20 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 11 | 14 |
| 611 | 66.22 | temperature | 25.0 | 270 | < th | dose independent | rect. | 12 | 18 |
| 621 | 66.25 | humidity | 80.0 | 270 | > th | dose independent | rect. | 23 | 9 |
| 650 | 66.30 | temperature | 25.0 | 90 | < th | dose independent | rect. | 12 | 21 |
| 656 | 66.31 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 658 | 66.31 | humidity | 60.0 | 270 | > th | dose dependent | rect. | 21 | 11 |
| 659 | 66.31 | radiation | 20.0 | 720 | < th | dose dependent | rect. | 11 | 15 |
| 700 | 66.38 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 10 | 4 |
| 702 | 66.38 | radiation | 1.0 | 720 | < th | dose independent | rect. | 11 | 15 |
| 724 | 66.42 | temperature | 25.0 | 270 | < th | dose independent | rect. | 23 | 8 |
| 744 | 66.45 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 7 | 17 |
| 781 | 66.49 | temperature | 30.0 | 270 | < th | dose independent | rect. | 7 | 17 |
| 795 | 66.51 | temperature | 30.0 | 30 | < th | dose independent | rect. | 1 | 10 |
| 796 | 66.51 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 1 | 10 |
| 798 | 66.51 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 1 | 10 |
| 815 | 66.54 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 2 | 10 |
| 818 | 66.54 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 2 | 10 |
| 820 | 66.54 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 12 | 14 |
| 851 | 66.57 | temperature | 10.0 | 30 | > th | dose independent | rect. | 1 | 10 |
| 853 | 66.57 | humidity | 50.0 | 30 | > th | dose independent | rect. | 1 | 10 |
| 854 | 66.57 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 1 | 10 |
| 855 | 66.57 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 1 | 10 |
| 856 | 66.57 | wind | 9.0 | 30 | < th | dose independent | rect. | 11 | 14 |
| 857 | 66.57 | temperature | 10.0 | 30 | > th | dose independent | rect. | 11 | 14 |
| 874 | 66.59 | wind | 9.0 | 30 | < th | dose independent | rect. | 1 | 10 |
| 880 | 66.59 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 9 | 16 |
| 885 | 66.60 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 9 | 3 |
| 888 | 66.60 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 24 | 16 |
| 895 | 66.61 | radiation | 40.0 | 30 | < th | dose independent | rect. | 1 | 10 |
| 921 | 66.63 | radiation | 1.0 | 720 | > th | dose independent | rect. | 9 | 20 |
| 927 | 66.64 | radiation | 1.0 | 720 | > th | dose independent | rect. | 9 | 10 |
| 933 | 66.64 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 11 | 14 |
| 943 | 66.64 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 11 | 14 |
| 973 | 66.67 | temperature | 25.0 | 270 | < th | dose independent | rect. | 24 | 5 |
| 982 | 66.67 | humidity | 60.0 | 270 | > th | dose dependent | rect. | 23 | 8 |
| 987 | 66.68 | radiation | 10.0 | 720 | < th | dose independent | rect. | 13 | 6 |