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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os11g0556400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein kinase-like domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.9 (0.0305) R2 : 0.119
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.505 (0.0643) R2dN8 : 0.154 R2N8 : 0.119
σ : 0.575
deviance : 151.62
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
136.93 0.55 2.93 -0.179 0.323 -0.346 -0.24 2.43 0.476 4.9 1.2 45 -- --
140.47 0.552 2.9 -0.101 0.255 -0.222 -0.612 -- 0.492 5.03 1.9 49 -- --
137.06 0.545 2.93 -0.182 0.322 -0.346 -- 2.53 0.477 4.73 1.22 45 -- --
141.39 0.554 2.9 -0.087 0.253 -0.217 -- -- 0.495 4.9 1.901 49 -- --
141.12 0.553 2.93 -0.223 -- -0.548 -- 2.6 0.49 -- 1.381 46 -- --
142.13 0.559 2.9 -0.0197 0.409 -- -0.557 -- 0.491 4.87 -- -- -- --
142.92 0.56 2.9 -0.0181 0.405 -- -- -- 0.494 4.74 -- -- -- --
143.1 0.557 2.9 -0.137 -- -0.36 -- -- 0.498 -- 2.027 53 -- --
141.58 0.554 2.9 -- 0.261 -0.194 -- -- 0.503 4.87 2.049 53 -- --
151.62 0.575 2.9 -0.00277 -- -- -- -- 0.504 -- -- -- -- --
142.93 0.559 2.89 -- 0.405 -- -- -- 0.496 4.74 -- -- -- --
143.57 0.558 2.9 -- -- -0.347 -- -- 0.509 -- 2.097 53 -- --
151.62 0.575 2.9 -- -- -- -- -- 0.505 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 129.32 wind 1.0 30 > th dose independent rect. 7 23
3 131.44 wind 9.0 4320 < th dose independent rect. 7 1
5 131.44 temperature 15.0 30 > th dose dependent rect. 1 6
6 131.72 atmosphere 1005.0 30 > th dose dependent rect. 6 1
7 131.77 wind 3.0 30 < th dose dependent rect. 6 1
8 131.80 humidity 80.0 30 > th dose dependent rect. 6 1
9 131.84 radiation 1.0 30 > th dose dependent rect. 6 1
12 131.99 temperature 30.0 30 < th dose dependent rect. 6 1
19 132.15 wind 3.0 30 < th dose independent rect. 6 1
25 132.28 radiation 20.0 10 < th dose dependent rect. 6 1
26 132.29 temperature 20.0 10 > th dose independent rect. 6 1
28 132.31 temperature 15.0 4320 > th dose independent rect. 7 1
30 132.37 atmosphere 1000.0 30 > th dose independent rect. 6 1
32 132.39 radiation 1.0 30 > th dose independent rect. 6 1
35 132.40 wind 1.0 30 > th dose independent rect. 6 1
36 132.40 humidity 90.0 30 < th dose independent rect. 6 1
37 132.40 temperature 15.0 30 > th dose independent rect. 7 23
43 132.41 temperature 30.0 1440 < th dose independent rect. 7 1
47 132.41 humidity 80.0 30 > th dose independent rect. 6 1
48 132.41 humidity 50.0 1440 > th dose independent rect. 7 1
54 132.41 atmosphere 995.0 1440 > th dose independent rect. 7 1
55 132.41 atmosphere 1015.0 1440 < th dose independent rect. 7 1
56 132.41 temperature 10.0 1440 > th dose independent rect. 8 23
62 132.42 temperature 10.0 30 > th dose independent rect. 6 1
64 132.42 temperature 30.0 30 < th dose independent rect. 6 1
65 132.42 humidity 50.0 30 > th dose independent rect. 6 1
70 132.42 atmosphere 1015.0 30 < th dose independent rect. 6 1
71 132.42 radiation 20.0 30 < th dose independent rect. 6 1
74 132.42 precipitation 0.1 30 < th dose independent rect. 6 1
76 132.42 precipitation 0.1 30 < th dose dependent rect. 6 1
104 132.58 wind 9.0 30 < th dose independent rect. 7 23
105 132.62 temperature 10.0 30 > th dose dependent rect. 6 1
112 132.68 wind 1.0 90 < th dose independent rect. 23 3
130 133.14 precipitation 0.1 30 < th dose independent rect. 7 23
131 133.14 precipitation 0.1 30 < th dose dependent rect. 7 23
134 133.24 atmosphere 1005.0 90 > th dose dependent rect. 1 6
135 133.34 radiation 40.0 1440 < th dose independent rect. 7 1
138 133.41 wind 1.0 90 < th dose independent rect. 15 11
139 133.41 humidity 50.0 30 > th dose independent rect. 7 23
141 133.45 atmosphere 995.0 30 > th dose independent rect. 7 23
142 133.50 humidity 90.0 10 < th dose dependent rect. 6 1
143 133.52 wind 3.0 30 < th dose dependent rect. 1 6
150 133.57 atmosphere 1015.0 30 < th dose dependent rect. 6 1
156 133.79 wind 1.0 90 < th dose dependent rect. 23 4
159 133.84 wind 9.0 4320 < th dose independent rect. 2 6
167 133.91 wind 3.0 30 < th dose independent rect. 1 6
173 134.06 wind 1.0 90 < th dose dependent rect. 24 1
176 134.10 wind 1.0 90 < th dose dependent rect. 15 12
182 134.18 temperature 20.0 30 > th dose independent rect. 1 6
207 134.43 atmosphere 1010.0 10 < th dose independent rect. 3 10
241 134.52 wind 1.0 30 > th dose dependent rect. 6 1
278 134.62 wind 3.0 30 < th dose dependent rect. 1 8
282 134.72 wind 1.0 30 > th dose independent rect. 7 18
289 134.79 atmosphere 995.0 30 > th dose dependent rect. 1 6
336 135.17 wind 1.0 720 < th dose dependent rect. 15 3
346 135.24 wind 3.0 10 < th dose independent rect. 1 8
349 135.26 wind 9.0 720 < th dose independent rect. 19 8
350 135.28 humidity 90.0 90 < th dose independent rect. 1 6
360 135.35 temperature 10.0 1440 > th dose independent rect. 2 6
363 135.35 temperature 30.0 1440 < th dose independent rect. 2 6
367 135.35 humidity 50.0 1440 > th dose independent rect. 2 6
372 135.35 atmosphere 995.0 1440 > th dose independent rect. 2 6
373 135.35 temperature 10.0 1440 > th dose independent rect. 8 18
379 135.39 temperature 10.0 720 > th dose independent rect. 7 8
380 135.39 atmosphere 1015.0 720 < th dose independent rect. 7 8
381 135.39 temperature 10.0 720 > th dose independent rect. 15 16
389 135.45 atmosphere 1000.0 30 > th dose independent rect. 1 6
404 135.52 temperature 10.0 720 > th dose independent rect. 19 8
405 135.52 temperature 30.0 720 < th dose independent rect. 19 8
406 135.52 humidity 50.0 720 > th dose independent rect. 19 8
407 135.52 atmosphere 995.0 720 > th dose independent rect. 19 8
408 135.52 radiation 1.0 720 < th dose independent rect. 19 8
413 135.52 temperature 10.0 720 > th dose independent rect. 3 16
414 135.52 radiation 1.0 720 < th dose dependent rect. 19 8
421 135.55 precipitation 0.1 30 < th dose independent rect. 1 6
422 135.55 humidity 50.0 30 > th dose independent rect. 3 10
424 135.55 precipitation 0.1 30 < th dose dependent rect. 1 6
427 135.57 temperature 10.0 270 > th dose dependent rect. 22 9
429 135.61 radiation 10.0 10 < th dose independent rect. 1 7
431 135.62 atmosphere 995.0 30 > th dose independent rect. 7 18
434 135.63 radiation 1.0 10 < th dose independent rect. 13 1
444 135.63 temperature 10.0 30 > th dose independent rect. 1 6
446 135.63 temperature 30.0 30 < th dose independent rect. 1 6
447 135.63 humidity 50.0 30 > th dose independent rect. 1 6
451 135.63 atmosphere 1015.0 30 < th dose independent rect. 1 6
455 135.63 temperature 10.0 30 > th dose independent rect. 7 18
456 135.63 precipitation 0.1 30 < th dose independent rect. 7 18
457 135.63 radiation 1.0 10 < th dose dependent rect. 13 1
467 135.63 precipitation 0.1 30 < th dose dependent rect. 7 18
472 135.68 wind 1.0 10 > th dose independent rect. 18 12
475 135.70 wind 9.0 4320 < th dose independent rect. 2 2
511 135.80 precipitation 0.1 720 < th dose independent rect. 7 8
512 135.80 wind 9.0 30 < th dose independent rect. 7 18
513 135.80 atmosphere 1015.0 30 < th dose independent rect. 7 23
515 135.80 precipitation 0.1 720 < th dose dependent rect. 7 8
518 135.81 humidity 90.0 30 > th dose independent rect. 24 3
520 135.81 humidity 80.0 90 > th dose dependent rect. 12 1
527 135.83 radiation 10.0 10 < th dose independent rect. 1 13
528 135.83 atmosphere 1015.0 30 < th dose dependent rect. 13 14
529 135.84 humidity 80.0 90 > th dose independent rect. 12 1
532 135.88 precipitation 0.1 720 < th dose independent rect. 19 8
536 135.88 precipitation 0.1 720 < th dose dependent rect. 19 8
538 135.89 atmosphere 995.0 720 > th dose independent rect. 7 8
544 135.92 atmosphere 995.0 720 > th dose independent rect. 15 16
546 135.93 wind 1.0 720 < th dose dependent rect. 14 6
547 135.94 radiation 1.0 30 < th dose independent rect. 3 22
609 136.07 precipitation 0.1 720 < th dose independent rect. 15 16
610 136.07 precipitation 0.1 720 < th dose dependent rect. 15 16
643 136.11 radiation 1.0 30 > th dose independent rect. 13 18
650 136.13 wind 1.0 720 < th dose independent rect. 14 4
669 136.16 humidity 50.0 30 > th dose independent rect. 7 18
670 136.16 wind 1.0 270 < th dose dependent rect. 18 2
672 136.17 wind 1.0 270 < th dose independent rect. 18 2
675 136.19 temperature 25.0 10 < th dose independent rect. 13 14
679 136.20 temperature 10.0 30 > th dose dependent rect. 7 18
688 136.22 atmosphere 995.0 720 > th dose independent rect. 3 16
698 136.25 radiation 1.0 90 < th dose dependent rect. 3 22
707 136.26 atmosphere 995.0 30 > th dose dependent rect. 7 23
718 136.29 temperature 20.0 30 > th dose independent rect. 1 2
722 136.29 wind 1.0 30 < th dose independent rect. 6 22
733 136.31 wind 1.0 10 > th dose independent rect. 16 14
734 136.31 atmosphere 1015.0 30 < th dose independent rect. 7 18
735 136.31 wind 1.0 30 > th dose independent rect. 16 21
737 136.31 humidity 90.0 10 > th dose dependent rect. 24 3
738 136.32 wind 9.0 4320 > th dose independent rect. 3 1
772 136.32 wind 9.0 4320 > th dose dependent rect. 3 1
805 136.33 atmosphere 1005.0 720 > th dose independent rect. 18 1
815 136.35 temperature 15.0 30 > th dose dependent rect. 1 2
819 136.36 temperature 25.0 10 < th dose independent rect. 24 3
851 136.42 radiation 1.0 30 > th dose dependent rect. 15 16
854 136.43 wind 1.0 30 > th dose independent rect. 18 19
878 136.46 atmosphere 995.0 30 > th dose dependent rect. 7 18
926 136.57 atmosphere 1010.0 10 < th dose dependent rect. 2 1
933 136.58 temperature 10.0 30 > th dose independent rect. 3 10
935 136.58 atmosphere 995.0 30 > th dose independent rect. 3 10
937 136.58 temperature 10.0 30 > th dose independent rect. 13 14
938 136.58 radiation 40.0 10 < th dose independent rect. 12 15
941 136.60 wind 9.0 30 < th dose independent rect. 3 10
958 136.64 temperature 25.0 30 > th dose independent rect. 16 13
959 136.64 wind 9.0 30 < th dose independent rect. 13 14
968 136.67 wind 1.0 30 > th dose independent rect. 16 9
977 136.68 precipitation 0.1 30 < th dose independent rect. 3 10
978 136.68 radiation 10.0 90 < th dose independent rect. 1 13
982 136.68 precipitation 0.1 30 < th dose dependent rect. 3 10
995 136.69 humidity 50.0 30 > th dose dependent rect. 1 6
996 136.70 atmosphere 1000.0 30 > th dose independent rect. 1 2
999 136.70 wind 1.0 10 > th dose independent rect. 20 10