Os11g0554200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0554200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 89.42 | 0.444 | 7.19 | -0.137 | 0.429 | -2.69 | 1.41 | -1.03 | 0.68 | 0.384 | 23.7 | 336 | -- | -- |
| 90.43 | 0.443 | 7.21 | -0.272 | 0.453 | -2.51 | 1.32 | -- | 0.653 | 0.144 | 23.87 | 312 | -- | -- |
| 97.83 | 0.461 | 7.2 | -0.237 | 0.428 | -2.6 | -- | -0.577 | 0.665 | 0.254 | 23.75 | 330 | -- | -- |
| 97.97 | 0.461 | 7.21 | -0.319 | 0.474 | -2.52 | -- | -- | 0.653 | 0.188 | 23.81 | 286 | -- | -- |
| 103.17 | 0.473 | 7.19 | -0.125 | -- | -2.4 | -- | -1.2 | 0.634 | -- | 25.08 | 596 | -- | -- |
| 174.37 | 0.619 | 7.11 | 0.342 | 0.377 | -- | 1.3 | -- | 1.07 | 22.9 | -- | -- | -- | -- |
| 181.19 | 0.63 | 7.12 | 0.292 | 0.383 | -- | -- | -- | 1.07 | 22.1 | -- | -- | -- | -- |
| 104.64 | 0.476 | 7.21 | -0.318 | -- | -2.34 | -- | -- | 0.597 | -- | 24.9 | 507 | -- | -- |
| 100.5 | 0.467 | 7.21 | -- | 0.46 | -2.4 | -- | -- | 0.673 | 0.0523 | 23.88 | 284 | -- | -- |
| 190.05 | 0.644 | 7.11 | 0.297 | -- | -- | -- | -- | 1.07 | -- | -- | -- | -- | -- |
| 183.44 | 0.634 | 7.13 | -- | 0.384 | -- | -- | -- | 1.03 | 22.2 | -- | -- | -- | -- |
| 107.06 | 0.482 | 7.2 | -- | -- | -2.21 | -- | -- | 0.65 | -- | 24.96 | 503 | -- | -- |
| 192.37 | 0.647 | 7.11 | -- | -- | -- | -- | -- | 1.03 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 89.21 | temperature | 25 | 270 | < th | dose dependent | rect. | 6 | 23 |
| 7 | 90.95 | temperature | 25 | 270 | < th | dose dependent | rect. | 15 | 22 |
| 23 | 91.47 | temperature | 25 | 270 | < th | dose dependent | no | NA | NA |
| 58 | 93.68 | temperature | 25 | 270 | < th | dose dependent | rect. | 10 | 23 |
| 218 | 97.42 | temperature | 15 | 720 | > th | dose dependent | rect. | 11 | 22 |
| 240 | 97.79 | temperature | 25 | 30 | < th | dose dependent | rect. | 23 | 23 |
| 262 | 98.08 | temperature | 10 | 720 | > th | dose dependent | rect. | 13 | 23 |
| 271 | 98.13 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 9 |
| 338 | 98.75 | temperature | 25 | 1440 | < th | dose dependent | rect. | 18 | 18 |
| 343 | 98.78 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 15 |
| 350 | 98.83 | temperature | 10 | 720 | > th | dose dependent | rect. | 16 | 23 |
| 395 | 99.17 | temperature | 25 | 720 | < th | dose dependent | sin | 15 | NA |
| 410 | 99.26 | temperature | 10 | 270 | > th | dose dependent | no | NA | NA |
| 420 | 99.33 | temperature | 25 | 1440 | < th | dose dependent | sin | 5 | NA |
| 471 | 99.66 | temperature | 15 | 720 | > th | dose dependent | rect. | 13 | 19 |
| 549 | 100.09 | temperature | 10 | 1440 | > th | dose dependent | rect. | 21 | 14 |
| 679 | 100.57 | temperature | 10 | 1440 | > th | dose dependent | sin | 8 | NA |
| 688 | 100.58 | temperature | 10 | 270 | > th | dose dependent | rect. | 24 | 23 |
| 741 | 100.75 | temperature | 10 | 1440 | > th | dose dependent | rect. | 1 | 10 |
| 766 | 100.80 | temperature | 10 | 1440 | > th | dose dependent | rect. | 3 | 6 |
| 979 | 101.46 | temperature | 25 | 1440 | < th | dose dependent | rect. | 22 | 1 |