Os11g0553500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein kinase-like domain containing protein.
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Os11g0553500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein kinase-like domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 152.28 | 0.58 | 2.91 | -0.0225 | 0.0206 | -1.61 | 0.65 | -13.8 | -0.0283 | 13.7 | 9.43 | 15 | -- | -- |
| 151.64 | 0.574 | 2.94 | 0.0297 | 0.0916 | 2.03 | 0.447 | -- | -0.0433 | 10.4 | 10.66 | 105 | -- | -- |
| 153.75 | 0.578 | 2.92 | 0.0246 | 0.0332 | -1.59 | -- | -13.5 | -0.026 | 12.8 | 9.553 | 14 | -- | -- |
| 152.06 | 0.574 | 2.95 | 0.0553 | 0.0971 | 2.28 | -- | -- | -0.0506 | 8.71 | 10.67 | 77 | -- | -- |
| 153.81 | 0.578 | 2.92 | -0.0171 | -- | -1.61 | -- | -13.5 | -0.0309 | -- | 9.547 | 13 | -- | -- |
| 161.49 | 0.596 | 2.95 | -9.11e-05 | 0.0854 | -- | 0.411 | -- | -0.0581 | 11.6 | -- | -- | -- | -- |
| 162.2 | 0.596 | 2.95 | 0.0159 | 0.0861 | -- | -- | -- | -0.0569 | 10.7 | -- | -- | -- | -- |
| 148.24 | 0.567 | 2.94 | 0.0835 | -- | 2.75 | -- | -- | -0.0246 | -- | 10.59 | 61 | -- | -- |
| 147.82 | 0.566 | 2.94 | -- | 0.104 | 2.73 | -- | -- | -0.0419 | 8.48 | 10.59 | 52 | -- | -- |
| 162.66 | 0.596 | 2.95 | 0.0142 | -- | -- | -- | -- | -0.0574 | -- | -- | -- | -- | -- |
| 162.2 | 0.596 | 2.95 | -- | 0.086 | -- | -- | -- | -0.0587 | 10.7 | -- | -- | -- | -- |
| 148.42 | 0.567 | 2.95 | -- | -- | 2.7 | -- | -- | -0.0411 | -- | 10.59 | 60 | -- | -- |
| 162.66 | 0.595 | 2.95 | -- | -- | -- | -- | -- | -0.0589 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 137.03 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 15 | 1 |
| 2 | 137.54 | wind | 7.0 | 30 | > th | dose dependent | rect. | 15 | 1 |
| 6 | 138.08 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 14 | 1 |
| 13 | 138.99 | temperature | 25.0 | 10 | < th | dose independent | rect. | 15 | 1 |
| 29 | 140.29 | wind | 7.0 | 30 | > th | dose independent | rect. | 15 | 1 |
| 58 | 143.57 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 15 | 1 |
| 88 | 145.96 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 14 | 1 |
| 92 | 146.26 | radiation | 1.0 | 10 | < th | dose independent | rect. | 16 | 1 |
| 95 | 146.42 | humidity | 90.0 | 90 | > th | dose independent | rect. | 14 | 1 |
| 98 | 146.42 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 14 | 1 |
| 101 | 146.51 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 16 | 1 |
| 115 | 147.30 | radiation | 1.0 | 10 | < th | dose independent | rect. | 11 | 6 |
| 127 | 147.46 | humidity | 60.0 | 30 | > th | dose independent | rect. | 15 | 1 |
| 168 | 148.09 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 11 | 6 |
| 215 | 148.86 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 15 | 1 |
| 247 | 149.85 | temperature | 25.0 | 270 | < th | dose independent | rect. | 11 | 5 |
| 310 | 151.22 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 15 | 1 |
| 338 | 151.52 | temperature | 20.0 | 30 | > th | dose independent | rect. | 15 | 1 |
| 381 | 151.88 | temperature | 25.0 | 10 | < th | dose independent | rect. | 12 | 5 |
| 393 | 152.03 | wind | 1.0 | 10 | > th | dose independent | rect. | 15 | 1 |
| 410 | 152.22 | temperature | 10.0 | 30 | > th | dose independent | rect. | 15 | 1 |
| 412 | 152.22 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 15 | 1 |
| 414 | 152.22 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 15 | 1 |
| 416 | 152.22 | temperature | 10.0 | 30 | > th | dose independent | rect. | 16 | 23 |
| 417 | 152.22 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 15 | 1 |
| 433 | 152.34 | humidity | 70.0 | 30 | < th | dose independent | rect. | 15 | 1 |
| 456 | 152.52 | wind | 9.0 | 30 | < th | dose independent | rect. | 16 | 23 |
| 477 | 152.66 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 12 | 5 |
| 483 | 152.74 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 6 | 11 |
| 511 | 153.05 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 515 | 153.05 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 17 | 23 |
| 533 | 153.13 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 16 | 23 |
| 559 | 153.31 | wind | 9.0 | 10 | < th | dose independent | rect. | 15 | 1 |
| 588 | 153.54 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 16 | 23 |
| 590 | 153.54 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 16 | 23 |
| 629 | 153.69 | wind | 9.0 | 30 | > th | dose dependent | rect. | 15 | 20 |
| 635 | 153.72 | radiation | 30.0 | 30 | < th | dose independent | rect. | 16 | 23 |
| 755 | 154.02 | wind | 5.0 | 270 | > th | dose dependent | rect. | 12 | 1 |
| 762 | 154.07 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 767 | 154.11 | wind | 7.0 | 270 | > th | dose independent | rect. | 12 | 1 |
| 785 | 154.18 | radiation | 40.0 | 30 | < th | dose dependent | rect. | 16 | 23 |
| 821 | 154.38 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 16 | 23 |
| 846 | 154.49 | radiation | 1.0 | 30 | > th | dose independent | rect. | 15 | 1 |
| 857 | 154.55 | radiation | 1.0 | 10 | < th | dose independent | rect. | 4 | 13 |
| 872 | 154.59 | wind | 9.0 | 30 | > th | dose independent | rect. | 15 | 20 |
| 943 | 154.76 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 962 | 154.81 | radiation | 30.0 | 30 | > th | dose independent | rect. | 15 | 1 |