Os11g0552600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Kinesin-like protein.
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Os11g0552600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Kinesin-like protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 131.99 | 0.54 | 7.63 | 1.92 | 1.43 | -0.629 | 0.622 | 0.687 | 0.516 | 18.6 | 20.01 | 31 | -- | -- |
| 134.37 | 0.54 | 7.64 | 1.85 | 1.44 | -0.688 | 0.723 | -- | 0.5 | 18.5 | 20.1 | 31 | -- | -- |
| 132.95 | 0.537 | 7.63 | 1.92 | 1.43 | -0.612 | -- | 0.732 | 0.516 | 18.6 | 20.03 | 31 | -- | -- |
| 133.72 | 0.539 | 7.64 | 1.78 | 1.42 | -0.636 | -- | -- | 0.513 | 18.5 | 20.93 | 20 | -- | -- |
| 238.59 | 0.719 | 7.62 | 1.91 | -- | -0.523 | -- | 0.936 | 0.472 | -- | 20.2 | 32 | -- | -- |
| 152.1 | 0.578 | 7.68 | 1.63 | 1.42 | -- | 0.442 | -- | 0.37 | 19 | -- | -- | -- | -- |
| 152.6 | 0.578 | 7.67 | 1.62 | 1.42 | -- | -- | -- | 0.371 | 19 | -- | -- | -- | -- |
| 240.68 | 0.726 | 7.62 | 1.73 | -- | -0.569 | -- | -- | 0.468 | -- | 21.05 | 15 | -- | -- |
| 214.04 | 0.685 | 7.7 | -- | 1.4 | -0.395 | -- | -- | 0.266 | 18.8 | 20.93 | 20 | -- | -- |
| 258.03 | 0.751 | 7.64 | 1.59 | -- | -- | -- | -- | 0.345 | -- | -- | -- | -- | -- |
| 221.59 | 0.696 | 7.72 | -- | 1.4 | -- | -- | -- | 0.191 | 19.1 | -- | -- | -- | -- |
| 316.9 | 0.829 | 7.67 | -- | -- | -0.366 | -- | -- | 0.232 | -- | 20.91 | 20 | -- | -- |
| 324.63 | 0.841 | 7.68 | -- | -- | -- | -- | -- | 0.168 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 129.67 | temperature | 20 | 30 | > th | dose independent | rect. | 2 | 23 |
| 2 | 131.61 | temperature | 20 | 30 | > th | dose independent | rect. | 21 | 23 |
| 4 | 131.88 | temperature | 20 | 30 | < th | dose independent | rect. | 5 | 22 |
| 8 | 132.01 | temperature | 20 | 30 | > th | dose independent | no | NA | NA |
| 9 | 132.01 | temperature | 20 | 30 | > th | dose independent | rect. | 7 | 23 |
| 10 | 132.04 | radiation | 1 | 4320 | > th | dose independent | rect. | 10 | 1 |
| 12 | 132.12 | temperature | 20 | 30 | < th | dose independent | rect. | 22 | 22 |
| 14 | 132.14 | humidity | 50 | 14400 | < th | dose dependent | rect. | 11 | 1 |
| 17 | 132.22 | temperature | 20 | 30 | > th | dose independent | rect. | 13 | 23 |
| 18 | 132.51 | radiation | 1 | 4320 | < th | dose independent | rect. | 10 | 1 |
| 20 | 132.51 | radiation | 1 | 4320 | < th | dose dependent | rect. | 10 | 1 |
| 22 | 132.59 | temperature | 20 | 30 | < th | dose independent | rect. | 1 | 23 |
| 23 | 132.61 | temperature | 20 | 30 | < th | dose independent | rect. | 13 | 23 |
| 25 | 132.64 | temperature | 20 | 30 | < th | dose independent | rect. | 9 | 23 |
| 26 | 132.64 | temperature | 20 | 30 | < th | dose independent | rect. | 17 | 23 |
| 27 | 132.65 | temperature | 20 | 30 | < th | dose independent | no | NA | NA |
| 29 | 132.68 | temperature | 20 | 30 | < th | dose independent | rect. | 15 | 23 |
| 30 | 132.69 | temperature | 20 | 30 | < th | dose independent | rect. | 7 | 23 |
| 31 | 132.69 | temperature | 20 | 30 | < th | dose independent | rect. | 11 | 23 |
| 35 | 132.73 | temperature | 20 | 30 | < th | dose independent | rect. | 19 | 23 |
| 48 | 133.20 | temperature | 20 | 30 | > th | dose independent | rect. | 2 | 18 |
| 60 | 133.56 | temperature | 15 | 4320 | < th | dose dependent | rect. | 11 | 2 |
| 77 | 133.82 | humidity | 60 | 14400 | < th | dose dependent | rect. | 8 | 1 |
| 92 | 133.99 | temperature | 20 | 30 | > th | dose independent | rect. | 15 | 23 |
| 99 | 134.05 | temperature | 20 | 30 | > th | dose independent | rect. | 9 | 23 |
| 130 | 134.29 | temperature | 15 | 4320 | < th | dose independent | rect. | 11 | 2 |
| 163 | 134.53 | temperature | 15 | 4320 | < th | dose dependent | rect. | 10 | 7 |
| 237 | 135.06 | humidity | 60 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 240 | 135.07 | humidity | 50 | 14400 | < th | dose dependent | rect. | 8 | 5 |
| 267 | 135.22 | temperature | 20 | 1440 | < th | dose independent | rect. | 7 | 4 |
| 276 | 135.26 | temperature | 20 | 1440 | > th | dose independent | rect. | 7 | 5 |
| 291 | 135.36 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 7 |
| 295 | 135.37 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 7 |
| 297 | 135.38 | temperature | 15 | 4320 | > th | dose independent | rect. | 11 | 1 |
| 418 | 135.86 | humidity | 50 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 421 | 135.88 | humidity | 50 | 14400 | > th | dose independent | rect. | 3 | 6 |
| 443 | 135.97 | temperature | 20 | 10 | < th | dose independent | rect. | 9 | 18 |
| 452 | 136.01 | temperature | 20 | 4320 | < th | dose dependent | rect. | 5 | 9 |
| 475 | 136.07 | radiation | 1 | 4320 | > th | dose independent | rect. | 8 | 7 |
| 476 | 136.07 | humidity | 70 | 14400 | < th | dose dependent | rect. | 19 | 12 |
| 486 | 136.10 | humidity | 70 | 14400 | < th | dose dependent | rect. | 19 | 2 |
| 513 | 136.20 | temperature | 25 | 30 | < th | dose dependent | rect. | 9 | 22 |
| 567 | 136.38 | temperature | 15 | 4320 | < th | dose independent | rect. | 10 | 7 |
| 569 | 136.39 | radiation | 1 | 4320 | < th | dose independent | rect. | 8 | 7 |
| 574 | 136.39 | radiation | 1 | 4320 | < th | dose dependent | rect. | 8 | 7 |
| 575 | 136.40 | temperature | 20 | 30 | > th | dose independent | sin | 5 | NA |
| 578 | 136.41 | radiation | 20 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 581 | 136.41 | radiation | 20 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 597 | 136.43 | temperature | 20 | 4320 | < th | dose dependent | rect. | 6 | 1 |
| 618 | 136.48 | temperature | 20 | 1440 | < th | dose independent | sin | 2 | NA |
| 623 | 136.49 | temperature | 20 | 1440 | > th | dose independent | sin | 2 | NA |
| 636 | 136.51 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 16 |
| 660 | 136.54 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 16 |
| 684 | 136.60 | temperature | 20 | 4320 | < th | dose dependent | sin | 2 | NA |
| 713 | 136.66 | temperature | 20 | 270 | > th | dose independent | sin | 22 | NA |
| 743 | 136.70 | temperature | 25 | 10 | < th | dose dependent | rect. | 5 | 23 |
| 757 | 136.74 | atmosphere | 1015 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 759 | 136.74 | radiation | 20 | 14400 | < th | dose independent | rect. | 21 | 10 |
| 784 | 136.78 | atmosphere | 1015 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 793 | 136.79 | wind | 1 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 797 | 136.79 | radiation | 20 | 14400 | < th | dose independent | rect. | 2 | 5 |
| 799 | 136.79 | radiation | 20 | 14400 | < th | dose independent | rect. | 19 | 12 |
| 802 | 136.79 | humidity | 80 | 4320 | > th | dose dependent | rect. | 11 | 1 |
| 809 | 136.80 | atmosphere | 1015 | 14400 | < th | dose independent | rect. | 12 | 5 |
| 810 | 136.80 | atmosphere | 1015 | 14400 | < th | dose independent | rect. | 12 | 7 |
| 815 | 136.80 | atmosphere | 1015 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 818 | 136.81 | temperature | 20 | 30 | > th | dose independent | sin | 20 | NA |
| 845 | 136.83 | wind | 9 | 43200 | > th | dose independent | rect. | 20 | 11 |
| 869 | 136.86 | wind | 9 | 43200 | < th | dose independent | rect. | 20 | 11 |
| 904 | 136.93 | atmosphere | 1015 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 926 | 136.97 | wind | 9 | 43200 | > th | dose independent | rect. | 20 | 9 |
| 940 | 136.98 | humidity | 50 | 14400 | < th | dose dependent | sin | 7 | NA |
| 966 | 137.02 | temperature | 25 | 10 | < th | dose dependent | rect. | 13 | 23 |