Os11g0552100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF724 family protein.
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Os11g0552100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF724 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 197.92 | 0.661 | 5.15 | 2.63 | 2.22 | 1.68 | 0.424 | -1.64 | 0.96 | 21 | 30 | 1188 | -- | -- |
| 198.81 | 0.657 | 5.09 | 2.92 | 2.23 | 1.6 | 0.396 | -- | 1.01 | 20.9 | 30.03 | 1188 | -- | -- |
| 198.53 | 0.656 | 5.15 | 2.64 | 2.22 | 1.68 | -- | -1.54 | 0.961 | 21 | 30.01 | 1188 | -- | -- |
| 198.81 | 0.657 | 5.1 | 2.93 | 2.2 | 1.52 | -- | -- | 0.984 | 21 | 30.1 | 1182 | -- | -- |
| 332.7 | 0.85 | 5.22 | 2.39 | -- | 2.98 | -- | -1.13 | 0.275 | -- | 27.6 | 769 | -- | -- |
| 305.49 | 0.819 | 5.16 | 3.4 | 2.38 | -- | 0.639 | -- | 0.76 | 21.3 | -- | -- | -- | -- |
| 306.96 | 0.82 | 5.16 | 3.37 | 2.38 | -- | -- | -- | 0.76 | 21.3 | -- | -- | -- | -- |
| 331.27 | 0.848 | 5.19 | 2.62 | -- | 2.93 | -- | -- | 0.345 | -- | 27.51 | 765 | -- | -- |
| 414.35 | 0.948 | 5.13 | -- | 2.38 | 1.88 | -- | -- | 0.84 | 20.9 | 29.91 | 1392 | -- | -- |
| 636.63 | 1.18 | 5.1 | 3.39 | -- | -- | -- | -- | 0.75 | -- | -- | -- | -- | -- |
| 607.15 | 1.15 | 5.25 | -- | 2.38 | -- | -- | -- | 0.384 | 21.4 | -- | -- | -- | -- |
| 502.46 | 1.04 | 5.28 | -- | -- | 3.51 | -- | -- | -0.0362 | -- | 27.5 | 799 | -- | -- |
| 939.08 | 1.43 | 5.18 | -- | -- | -- | -- | -- | 0.374 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 187.13 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 2 | 10 |
| 9 | 188.13 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 21 | 15 |
| 12 | 188.27 | wind | 3.0 | 43200 | > th | dose dependent | sin | 7 | NA |
| 14 | 188.42 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 10 | 1 |
| 22 | 188.79 | wind | 5.0 | 43200 | < th | dose independent | sin | 5 | NA |
| 24 | 188.86 | radiation | 30.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 51 | 189.45 | wind | 5.0 | 43200 | > th | dose independent | sin | 5 | NA |
| 58 | 189.74 | wind | 5.0 | 43200 | < th | dose independent | rect. | 3 | 11 |
| 61 | 189.88 | wind | 7.0 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 72 | 190.36 | wind | 5.0 | 43200 | > th | dose independent | rect. | 3 | 11 |
| 75 | 190.44 | wind | 5.0 | 43200 | > th | dose independent | rect. | 5 | 2 |
| 85 | 190.70 | wind | 5.0 | 43200 | < th | dose independent | rect. | 5 | 2 |
| 90 | 190.82 | wind | 7.0 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 127 | 191.75 | wind | 5.0 | 43200 | > th | dose independent | rect. | 24 | 15 |
| 152 | 192.13 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 159 | 192.19 | wind | 5.0 | 43200 | < th | dose independent | rect. | 20 | 18 |
| 200 | 192.94 | wind | 7.0 | 43200 | < th | dose independent | rect. | 8 | 5 |
| 215 | 193.16 | wind | 5.0 | 43200 | > th | dose independent | rect. | 20 | 18 |
| 261 | 194.00 | wind | 7.0 | 43200 | > th | dose independent | rect. | 8 | 5 |
| 278 | 194.27 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 3 |
| 292 | 194.48 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 19 | 3 |
| 293 | 194.48 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 19 | 3 |
| 305 | 194.69 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 19 | 3 |
| 333 | 195.10 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 353 | 195.48 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 16 | 15 |
| 359 | 195.69 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 12 | 2 |
| 364 | 195.74 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 10 | 1 |
| 375 | 195.93 | radiation | 1.0 | 1440 | > th | dose dependent | rect. | 16 | 15 |
| 376 | 195.94 | temperature | 30.0 | 1440 | > th | dose dependent | rect. | 13 | 1 |
| 384 | 196.03 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 8 | 16 |
| 427 | 196.81 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 12 | 1 |
| 430 | 196.87 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 8 | 13 |
| 431 | 196.87 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 8 | 13 |
| 437 | 196.95 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 8 | 13 |
| 443 | 197.10 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 13 | 14 |
| 448 | 197.17 | temperature | 25.0 | 43200 | < th | dose dependent | rect. | 10 | 1 |
| 451 | 197.22 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 12 | 2 |
| 456 | 197.30 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 17 | 21 |
| 458 | 197.32 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 13 | 8 |
| 460 | 197.32 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 13 | 8 |
| 474 | 197.47 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 13 | 8 |
| 483 | 197.57 | temperature | 30.0 | 1440 | > th | dose dependent | rect. | 12 | 5 |
| 486 | 197.59 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 17 | 21 |
| 518 | 197.73 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 9 | 4 |
| 519 | 197.73 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 15 | 7 |
| 520 | 197.73 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 15 | 7 |
| 527 | 197.76 | radiation | 10.0 | 14400 | > th | dose independent | rect. | 9 | 1 |
| 528 | 197.77 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 5 |
| 531 | 197.77 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 5 |
| 547 | 197.88 | precipitation | 0.1 | 43200 | > th | dose dependent | sin | 17 | NA |
| 553 | 197.90 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 3 | 1 |
| 559 | 197.94 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 15 | 7 |
| 560 | 197.94 | wind | 5.0 | 43200 | < th | dose independent | rect. | 20 | 12 |
| 561 | 197.95 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 9 | 5 |
| 588 | 198.04 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 5 |
| 624 | 198.23 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 8 | 3 |
| 630 | 198.25 | temperature | 30.0 | 1440 | > th | dose dependent | sin | 20 | NA |
| 645 | 198.31 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 697 | 198.38 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 19 | 2 |
| 746 | 198.55 | temperature | 30.0 | 1440 | > th | dose dependent | no | NA | NA |
| 863 | 198.61 | temperature | 30.0 | 1440 | > th | dose dependent | rect. | 17 | 23 |
| 869 | 198.63 | radiation | 30.0 | 1440 | > th | dose dependent | rect. | 13 | 20 |
| 885 | 198.69 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 16 | 6 |
| 886 | 198.69 | temperature | 30.0 | 1440 | > th | dose dependent | rect. | 15 | 23 |
| 910 | 198.78 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 9 | 5 |
| 915 | 198.82 | radiation | 40.0 | 1440 | < th | dose dependent | rect. | 15 | 17 |