Os11g0546000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : RNase L inhibitor-like protein.
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Os11g0546000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : RNase L inhibitor-like protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 22.71 | 0.224 | 12.7 | 0.118 | 0.25 | 0.505 | 0.149 | 0.207 | 0.124 | 19.8 | 20.5 | 1473 | -- | -- |
| 22.62 | 0.222 | 12.7 | 0.02 | 0.249 | 0.485 | 0.186 | -- | 0.0967 | 19.5 | 20.6 | 2716 | -- | -- |
| 22.74 | 0.222 | 12.7 | 0.106 | 0.249 | 0.509 | -- | 0.181 | 0.124 | 19.8 | 20.56 | 1582 | -- | -- |
| 22.7 | 0.222 | 12.7 | 0.0147 | 0.253 | 0.481 | -- | -- | 0.0954 | 19.5 | 20.6 | 2716 | -- | -- |
| 25.75 | 0.236 | 12.7 | 0.0772 | -- | 0.522 | -- | 0.169 | 0.126 | -- | 20.6 | 2131 | -- | -- |
| 27.77 | 0.247 | 12.7 | 0.28 | 0.246 | -- | 0.215 | -- | 0.224 | 19.9 | -- | -- | -- | -- |
| 27.91 | 0.247 | 12.7 | 0.274 | 0.246 | -- | -- | -- | 0.224 | 19.9 | -- | -- | -- | -- |
| 25.73 | 0.236 | 12.7 | 0.0358 | -- | 0.497 | -- | -- | 0.0983 | -- | 20.54 | 2134 | -- | -- |
| 22.7 | 0.222 | 12.7 | -- | 0.254 | 0.486 | -- | -- | 0.0905 | 19.4 | 20.6 | 2719 | -- | -- |
| 31.2 | 0.261 | 12.7 | 0.272 | -- | -- | -- | -- | 0.221 | -- | -- | -- | -- | -- |
| 29.89 | 0.256 | 12.7 | -- | 0.244 | -- | -- | -- | 0.194 | 20 | -- | -- | -- | -- |
| 25.76 | 0.236 | 12.7 | -- | -- | 0.513 | -- | -- | 0.0913 | -- | 20.56 | 2131 | -- | -- |
| 33.15 | 0.269 | 12.7 | -- | -- | -- | -- | -- | 0.191 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 21.47 | temperature | 15 | 10 | > th | dose dependent | rect. | 9 | 20 |
| 5 | 21.66 | temperature | 10 | 270 | > th | dose dependent | rect. | 6 | 21 |
| 7 | 21.74 | temperature | 15 | 270 | > th | dose dependent | rect. | 16 | 22 |
| 36 | 22.19 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 6 |
| 39 | 22.20 | temperature | 20 | 4320 | > th | dose independent | rect. | 16 | 8 |
| 48 | 22.24 | temperature | 20 | 4320 | < th | dose independent | rect. | 18 | 6 |
| 50 | 22.27 | temperature | 20 | 4320 | < th | dose independent | rect. | 16 | 8 |
| 53 | 22.27 | temperature | 30 | 270 | < th | dose dependent | rect. | 10 | 22 |
| 68 | 22.31 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 88 | 22.36 | temperature | 20 | 1440 | > th | dose independent | rect. | 20 | 11 |
| 97 | 22.38 | temperature | 20 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 116 | 22.41 | temperature | 20 | 1440 | < th | dose independent | rect. | 19 | 11 |
| 187 | 22.51 | temperature | 20 | 1440 | < th | dose independent | rect. | 1 | 6 |
| 194 | 22.52 | temperature | 20 | 1440 | > th | dose independent | sin | 11 | NA |
| 257 | 22.58 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 259 | 22.59 | temperature | 20 | 1440 | < th | dose independent | sin | 12 | NA |
| 352 | 22.66 | temperature | 30 | 270 | < th | dose dependent | rect. | 22 | 22 |
| 354 | 22.67 | temperature | 20 | 4320 | > th | dose independent | sin | 17 | NA |
| 403 | 22.71 | temperature | 30 | 90 | < th | dose dependent | rect. | 13 | 22 |
| 410 | 22.72 | temperature | 20 | 1440 | < th | dose independent | rect. | 23 | 2 |
| 419 | 22.73 | temperature | 20 | 4320 | < th | dose independent | sin | 17 | NA |
| 562 | 22.84 | temperature | 20 | 1440 | > th | dose independent | rect. | 1 | 1 |
| 591 | 22.85 | temperature | 15 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 665 | 22.89 | temperature | 30 | 90 | < th | dose dependent | no | NA | NA |
| 718 | 22.92 | temperature | 30 | 90 | < th | dose dependent | rect. | 15 | 18 |
| 762 | 22.95 | temperature | 20 | 270 | > th | dose independent | rect. | 6 | 22 |
| 801 | 22.97 | temperature | 20 | 10 | > th | dose dependent | rect. | 9 | 15 |
| 814 | 22.98 | temperature | 15 | 90 | > th | dose dependent | rect. | 8 | 15 |
| 901 | 23.03 | temperature | 20 | 1440 | > th | dose independent | no | NA | NA |
| 979 | 23.07 | temperature | 20 | 90 | > th | dose independent | rect. | 8 | 21 |
| 990 | 23.07 | temperature | 30 | 90 | < th | dose dependent | rect. | 17 | 23 |
| 999 | 23.08 | temperature | 20 | 1440 | > th | dose independent | rect. | 1 | 23 |
| 1000 | 23.08 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 23 |