Os11g0545800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Regulator of chromosome condensation/beta-lactamase-inhibitor protein II domain containing protein.
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Os11g0545800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Regulator of chromosome condensation/beta-lactamase-inhibitor protein II domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 74.45 | 0.405 | 9.28 | -1.88 | 0.702 | -0.821 | 0.809 | -0.566 | -0.766 | 12.9 | 63 | 748 | -- | -- |
| 74.84 | 0.403 | 9.28 | -1.89 | 0.716 | -0.85 | 0.757 | -- | -0.756 | 13 | 63.49 | 765 | -- | -- |
| 76.97 | 0.409 | 9.28 | -1.85 | 0.686 | -0.88 | -- | -0.288 | -0.76 | 12.8 | 63.45 | 715 | -- | -- |
| 76.64 | 0.408 | 9.28 | -1.86 | 0.691 | -0.939 | -- | -- | -0.769 | 12.5 | 64 | 714 | -- | -- |
| 100.34 | 0.467 | 9.28 | -1.87 | -- | -0.835 | -- | -0.953 | -0.806 | -- | 63.07 | 430 | -- | -- |
| 92.58 | 0.451 | 9.32 | -1.79 | 0.676 | -- | 1.03 | -- | -0.907 | 14.6 | -- | -- | -- | -- |
| 96.29 | 0.46 | 9.32 | -1.76 | 0.677 | -- | -- | -- | -0.901 | 14.4 | -- | -- | -- | -- |
| 90.46 | 0.445 | 9.33 | -1.83 | -- | -0.561 | -- | -- | -0.944 | -- | 74 | 76 | -- | -- |
| 154.75 | 0.579 | 9.27 | -- | 0.625 | -1.21 | -- | -- | -0.738 | 14.1 | 66 | 7584 | -- | -- |
| 123.35 | 0.519 | 9.32 | -1.79 | -- | -- | -- | -- | -0.918 | -- | -- | -- | -- | -- |
| 178 | 0.624 | 9.27 | -- | 0.711 | -- | -- | -- | -0.705 | 14.5 | -- | -- | -- | -- |
| 143.34 | 0.558 | 9.25 | -- | -- | -1.52 | -- | -- | -0.619 | -- | 62.02 | 46431 | -- | -- |
| 207.81 | 0.673 | 9.28 | -- | -- | -- | -- | -- | -0.719 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 66.41 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 18 | 5 |
| 3 | 66.44 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 18 | 8 |
| 10 | 66.64 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 14 | 16 |
| 16 | 66.71 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 15 | 6 |
| 19 | 66.75 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 14 | 9 |
| 24 | 66.80 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 14 | 11 |
| 29 | 66.92 | wind | 7.0 | 43200 | > th | dose independent | rect. | 15 | 16 |
| 35 | 67.04 | wind | 7.0 | 43200 | > th | dose dependent | sin | 15 | NA |
| 36 | 67.04 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 17 | 18 |
| 46 | 67.12 | wind | 7.0 | 43200 | > th | dose independent | sin | 15 | NA |
| 56 | 67.17 | wind | 7.0 | 43200 | < th | dose independent | rect. | 15 | 16 |
| 68 | 67.23 | wind | 9.0 | 14400 | < th | dose independent | rect. | 18 | 7 |
| 71 | 67.24 | wind | 9.0 | 14400 | > th | dose independent | rect. | 18 | 4 |
| 75 | 67.25 | wind | 7.0 | 43200 | < th | dose independent | sin | 15 | NA |
| 81 | 67.27 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 90 | 67.33 | wind | 9.0 | 14400 | < th | dose independent | rect. | 18 | 9 |
| 93 | 67.36 | wind | 9.0 | 14400 | < th | dose independent | rect. | 20 | 5 |
| 98 | 67.38 | wind | 9.0 | 14400 | < th | dose independent | rect. | 18 | 4 |
| 106 | 67.40 | wind | 9.0 | 14400 | < th | dose independent | rect. | 20 | 7 |
| 117 | 67.43 | wind | 9.0 | 43200 | < th | dose independent | rect. | 14 | 7 |
| 125 | 67.46 | wind | 9.0 | 43200 | > th | dose independent | rect. | 14 | 7 |
| 131 | 67.51 | wind | 9.0 | 14400 | > th | dose independent | rect. | 20 | 4 |
| 169 | 67.66 | wind | 7.0 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 170 | 67.66 | wind | 7.0 | 43200 | > th | dose independent | rect. | 16 | 6 |
| 185 | 67.73 | wind | 9.0 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 188 | 67.74 | wind | 7.0 | 43200 | > th | dose independent | rect. | 12 | 12 |
| 193 | 67.75 | wind | 9.0 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 255 | 67.90 | wind | 7.0 | 43200 | < th | dose independent | rect. | 12 | 12 |
| 278 | 67.95 | wind | 7.0 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 378 | 68.23 | wind | 7.0 | 43200 | > th | dose independent | rect. | 4 | 17 |
| 417 | 68.29 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 6 | 15 |
| 420 | 68.30 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 8 | 13 |
| 439 | 68.34 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 4 |
| 453 | 68.37 | wind | 7.0 | 43200 | < th | dose independent | rect. | 4 | 17 |
| 503 | 68.46 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 14 | 4 |
| 527 | 68.50 | wind | 9.0 | 14400 | > th | dose independent | rect. | 17 | 18 |
| 549 | 68.53 | wind | 9.0 | 14400 | < th | dose independent | rect. | 17 | 18 |
| 577 | 68.56 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 16 | 2 |
| 783 | 68.84 | wind | 7.0 | 43200 | > th | dose independent | no | NA | NA |
| 874 | 68.98 | wind | 7.0 | 43200 | > th | dose independent | rect. | 20 | 23 |
| 887 | 69.01 | wind | 7.0 | 43200 | < th | dose independent | no | NA | NA |
| 910 | 69.05 | wind | 7.0 | 43200 | > th | dose dependent | no | NA | NA |
| 949 | 69.15 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 20 | 23 |
| 967 | 69.20 | wind | 7.0 | 43200 | < th | dose independent | rect. | 20 | 23 |