Os11g0544200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0544200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 28.67 | 0.252 | 11.2 | -0.555 | 0.729 | 0.473 | 1.11 | 0.724 | 0.0162 | 2.68 | 0.1624 | 5413 | -- | -- |
| 29.19 | 0.252 | 11.2 | -0.599 | 0.719 | 0.54 | 0.999 | -- | 0.0234 | 2.62 | 0.3307 | 5332 | -- | -- |
| 32.97 | 0.267 | 11.2 | -0.586 | 0.734 | 0.484 | -- | 0.766 | 0.00913 | 2.79 | 0.1662 | 5421 | -- | -- |
| 33.25 | 0.269 | 11.2 | -0.625 | 0.737 | 0.594 | -- | -- | 0.000374 | 2.78 | 0.3224 | 5332 | -- | -- |
| 63.93 | 0.372 | 11.2 | -0.574 | -- | 0.475 | -- | 0.947 | 0.0232 | -- | 0.2987 | 5260 | -- | -- |
| 36.12 | 0.282 | 11.2 | -0.383 | 0.736 | -- | 1.22 | -- | -0.0417 | 2.69 | -- | -- | -- | -- |
| 41.3 | 0.301 | 11.2 | -0.413 | 0.741 | -- | -- | -- | -0.0491 | 2.79 | -- | -- | -- | -- |
| 64.18 | 0.373 | 11.2 | -0.596 | -- | 0.653 | -- | -- | -0.00229 | -- | 0.4439 | 3375 | -- | -- |
| 41.55 | 0.3 | 11.2 | -- | 0.74 | 0.427 | -- | -- | 0.044 | 2.67 | 0.09047 | 5680 | -- | -- |
| 73.17 | 0.4 | 11.2 | -0.382 | -- | -- | -- | -- | -0.0301 | -- | -- | -- | -- | -- |
| 45.8 | 0.317 | 11.2 | -- | 0.733 | -- | -- | -- | -0.00302 | 2.78 | -- | -- | -- | -- |
| 72.15 | 0.396 | 11.2 | -- | -- | 0.485 | -- | -- | 0.0565 | -- | 0.5 | 2598 | -- | -- |
| 77.02 | 0.41 | 11.2 | -- | -- | -- | -- | -- | 0.0122 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 27.09 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 4 | 14 |
| 2 | 27.09 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 4 | 14 |
| 3 | 27.14 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 4 | 14 |
| 16 | 27.60 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 17 | 16 |
| 19 | 27.65 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 25 | 27.71 | humidity | 60.0 | 30 | > th | dose dependent | sin | 20 | NA |
| 33 | 27.78 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 10 | 9 |
| 34 | 27.78 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 10 | 9 |
| 35 | 27.79 | humidity | 60.0 | 14400 | < th | dose independent | sin | 12 | NA |
| 40 | 27.82 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 13 | 6 |
| 41 | 27.82 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 10 | 9 |
| 43 | 27.82 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 13 | 6 |
| 49 | 27.89 | precipitation | 0.1 | 4320 | > th | dose dependent | sin | 1 | NA |
| 51 | 27.90 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 15 | 18 |
| 55 | 27.91 | humidity | 60.0 | 14400 | > th | dose independent | sin | 12 | NA |
| 57 | 27.91 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 16 | 1 |
| 58 | 27.92 | precipitation | 0.1 | 4320 | < th | dose independent | sin | 1 | NA |
| 60 | 27.92 | precipitation | 0.1 | 4320 | < th | dose dependent | sin | 1 | NA |
| 61 | 27.93 | precipitation | 0.1 | 4320 | > th | dose independent | sin | 1 | NA |
| 62 | 27.93 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 15 | 4 |
| 64 | 27.93 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 14 | 3 |
| 78 | 27.95 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 79 | 27.95 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 16 | 1 |
| 80 | 27.95 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 16 | 1 |
| 81 | 27.97 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 16 | 1 |
| 91 | 27.99 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 16 | 2 |
| 100 | 28.06 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 17 | 16 |
| 113 | 28.09 | humidity | 70.0 | 14400 | < th | dose dependent | sin | 11 | NA |
| 114 | 28.10 | wind | 3.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 124 | 28.12 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 4 |
| 126 | 28.12 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 4 |
| 154 | 28.15 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 14 |
| 160 | 28.17 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 4 |
| 161 | 28.18 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 15 | 4 |
| 162 | 28.18 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 15 | 6 |
| 171 | 28.18 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 15 | 17 |
| 173 | 28.18 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 15 | 19 |
| 288 | 28.28 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 8 | 11 |
| 299 | 28.29 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 10 | 9 |
| 308 | 28.30 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 309 | 28.30 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 312 | 28.30 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 1 | 17 |
| 325 | 28.32 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 6 |
| 346 | 28.34 | wind | 3.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 378 | 28.36 | humidity | 60.0 | 30 | > th | dose dependent | rect. | 6 | 14 |
| 500 | 28.50 | radiation | 20.0 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 571 | 28.56 | humidity | 90.0 | 30 | < th | dose dependent | sin | 19 | NA |
| 587 | 28.58 | wind | 9.0 | 43200 | < th | dose independent | rect. | 12 | 2 |
| 634 | 28.60 | wind | 3.0 | 43200 | > th | dose independent | rect. | 20 | 12 |
| 643 | 28.61 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 12 | 2 |
| 663 | 28.64 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 9 | 12 |
| 665 | 28.64 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 7 | 14 |
| 704 | 28.64 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 9 | 22 |
| 713 | 28.65 | humidity | 60.0 | 14400 | > th | dose independent | no | NA | NA |
| 715 | 28.65 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 9 | 10 |
| 772 | 28.65 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 17 | 23 |
| 796 | 28.66 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 20 | 23 |
| 875 | 28.72 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 9 | 23 |
| 884 | 28.73 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 9 | 10 |
| 917 | 28.74 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 21 |
| 920 | 28.75 | humidity | 60.0 | 14400 | < th | dose independent | no | NA | NA |