Os11g0543300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF247, plant family protein.
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Os11g0543300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF247, plant family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 107.75 | 0.488 | 3.54 | -0.263 | 0.187 | 1.1 | -0.595 | 1.33 | 0.108 | 5.62 | 19.1 | 6499 | -- | -- |
| 109.49 | 0.487 | 3.48 | -0.125 | 0.207 | 0.822 | -0.602 | -- | 0.166 | 6.1 | 18.8 | 6493 | -- | -- |
| 108.52 | 0.485 | 3.53 | -0.258 | 0.19 | 1.1 | -- | 1.33 | 0.113 | 6.46 | 19.1 | 6499 | -- | -- |
| 109.73 | 0.488 | 3.48 | -0.193 | 0.186 | 0.678 | -- | -- | 0.132 | 6.41 | 19.6 | 6512 | -- | -- |
| 110.25 | 0.489 | 3.54 | -0.261 | -- | 1.14 | -- | 1.42 | 0.112 | -- | 18.97 | 6496 | -- | -- |
| 115.62 | 0.504 | 3.53 | -0.651 | 0.19 | -- | -0.576 | -- | -0.0496 | 5.84 | -- | -- | -- | -- |
| 116.29 | 0.505 | 3.53 | -0.654 | 0.193 | -- | -- | -- | -0.0467 | 6.81 | -- | -- | -- | -- |
| 111.56 | 0.492 | 3.49 | -0.198 | -- | 0.665 | -- | -- | 0.14 | -- | 19.5 | 6436 | -- | -- |
| 110.35 | 0.489 | 3.47 | -- | 0.201 | 0.784 | -- | -- | 0.188 | 6.44 | 19.4 | 6462 | -- | -- |
| 118.24 | 0.508 | 3.53 | -0.65 | -- | -- | -- | -- | -0.043 | -- | -- | -- | -- | -- |
| 127.56 | 0.528 | 3.51 | -- | 0.186 | -- | -- | -- | 0.0261 | 7.03 | -- | -- | -- | -- |
| 112.13 | 0.493 | 3.48 | -- | -- | 0.793 | -- | -- | 0.186 | -- | 19.6 | 6475 | -- | -- |
| 129.37 | 0.531 | 3.51 | -- | -- | -- | -- | -- | 0.0291 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 104.49 | radiation | 10 | 10 | > th | dose independent | rect. | 6 | 1 |
| 27 | 104.49 | radiation | 10 | 10 | > th | dose dependent | rect. | 6 | 1 |
| 68 | 108.08 | wind | 5 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 69 | 108.08 | humidity | 70 | 43200 | < th | dose independent | rect. | 22 | 11 |
| 70 | 108.11 | wind | 5 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 75 | 108.26 | humidity | 70 | 43200 | > th | dose independent | rect. | 23 | 10 |
| 78 | 108.27 | atmosphere | 1005 | 30 | > th | dose dependent | rect. | 1 | 7 |
| 81 | 108.30 | humidity | 70 | 43200 | < th | dose dependent | rect. | 24 | 9 |
| 83 | 108.32 | radiation | 10 | 30 | > th | dose independent | rect. | 16 | 16 |
| 109 | 108.48 | wind | 7 | 14400 | < th | dose independent | rect. | 5 | 5 |
| 152 | 108.66 | humidity | 50 | 43200 | < th | dose dependent | rect. | 9 | 1 |
| 166 | 108.72 | wind | 7 | 14400 | > th | dose independent | rect. | 5 | 5 |
| 168 | 108.72 | humidity | 60 | 43200 | < th | dose dependent | sin | 8 | NA |
| 169 | 108.72 | humidity | 70 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 172 | 108.73 | temperature | 20 | 4320 | < th | dose independent | rect. | 13 | 16 |
| 185 | 108.76 | humidity | 70 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 190 | 108.77 | temperature | 20 | 4320 | > th | dose independent | rect. | 13 | 16 |
| 192 | 108.78 | humidity | 80 | 270 | < th | dose independent | rect. | 8 | 1 |
| 209 | 108.79 | radiation | 10 | 4320 | > th | dose dependent | rect. | 16 | 15 |
| 280 | 108.89 | temperature | 20 | 4320 | > th | dose independent | rect. | 1 | 1 |
| 281 | 108.89 | temperature | 20 | 4320 | > th | dose independent | rect. | 3 | 1 |
| 282 | 108.89 | temperature | 20 | 4320 | > th | dose independent | rect. | 1 | 3 |
| 290 | 108.89 | temperature | 25 | 1440 | > th | dose dependent | rect. | 3 | 6 |
| 292 | 108.90 | temperature | 20 | 4320 | < th | dose independent | rect. | 1 | 3 |
| 307 | 108.92 | temperature | 20 | 4320 | < th | dose independent | rect. | 3 | 1 |
| 330 | 108.95 | temperature | 20 | 4320 | < th | dose independent | sin | 15 | NA |
| 337 | 108.95 | wind | 3 | 14400 | > th | dose dependent | rect. | 10 | 2 |
| 339 | 108.96 | temperature | 20 | 4320 | < th | dose independent | rect. | 1 | 1 |
| 362 | 109.00 | temperature | 20 | 4320 | > th | dose independent | sin | 14 | NA |
| 371 | 109.01 | humidity | 70 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 392 | 109.03 | temperature | 20 | 4320 | > th | dose independent | rect. | 22 | 6 |
| 398 | 109.03 | wind | 3 | 4320 | < th | dose dependent | rect. | 6 | 1 |
| 416 | 109.06 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 11 |
| 420 | 109.06 | wind | 1 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 446 | 109.08 | temperature | 20 | 4320 | < th | dose independent | rect. | 22 | 6 |
| 450 | 109.08 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 11 |
| 457 | 109.08 | wind | 3 | 30 | < th | dose dependent | rect. | 6 | 1 |
| 481 | 109.10 | wind | 1 | 14400 | < th | dose dependent | rect. | 4 | 8 |
| 483 | 109.11 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 512 | 109.12 | wind | 1 | 14400 | < th | dose dependent | rect. | 19 | 16 |
| 515 | 109.13 | temperature | 30 | 1440 | < th | dose independent | rect. | 15 | 8 |
| 521 | 109.13 | temperature | 30 | 1440 | < th | dose independent | rect. | 15 | 17 |
| 536 | 109.14 | temperature | 30 | 1440 | < th | dose independent | rect. | 15 | 5 |
| 547 | 109.14 | wind | 9 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 548 | 109.14 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 561 | 109.16 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 581 | 109.16 | atmosphere | 1005 | 30 | > th | dose dependent | rect. | 6 | 1 |
| 603 | 109.18 | wind | 3 | 4320 | < th | dose independent | rect. | 6 | 1 |
| 612 | 109.18 | temperature | 30 | 1440 | < th | dose independent | rect. | 15 | 13 |
| 633 | 109.19 | wind | 1 | 14400 | < th | dose dependent | rect. | 4 | 10 |
| 634 | 109.20 | wind | 9 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 646 | 109.21 | temperature | 30 | 1440 | > th | dose independent | rect. | 15 | 4 |
| 664 | 109.21 | wind | 1 | 14400 | > th | dose independent | rect. | 4 | 19 |
| 684 | 109.22 | radiation | 1 | 43200 | < th | dose dependent | rect. | 3 | 2 |
| 753 | 109.25 | wind | 9 | 14400 | < th | dose independent | rect. | 23 | 15 |
| 756 | 109.25 | temperature | 20 | 4320 | < th | dose independent | rect. | 22 | 22 |
| 760 | 109.25 | radiation | 1 | 1440 | < th | dose dependent | rect. | 18 | 2 |
| 768 | 109.26 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 22 |
| 775 | 109.27 | temperature | 20 | 4320 | < th | dose independent | no | NA | NA |
| 787 | 109.27 | temperature | 20 | 4320 | < th | dose independent | rect. | 24 | 23 |
| 793 | 109.28 | wind | 1 | 14400 | > th | dose independent | rect. | 20 | 15 |
| 801 | 109.28 | radiation | 1 | 43200 | < th | dose dependent | rect. | 21 | 8 |
| 812 | 109.29 | wind | 9 | 14400 | > th | dose independent | rect. | 22 | 16 |
| 848 | 109.30 | radiation | 1 | 1440 | < th | dose dependent | rect. | 18 | 11 |
| 851 | 109.31 | temperature | 20 | 4320 | > th | dose independent | no | NA | NA |
| 855 | 109.31 | radiation | 10 | 4320 | > th | dose independent | rect. | 16 | 15 |
| 864 | 109.31 | temperature | 20 | 4320 | > th | dose independent | rect. | 24 | 23 |
| 877 | 109.32 | wind | 1 | 14400 | < th | dose independent | rect. | 19 | 16 |
| 888 | 109.32 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 23 |
| 892 | 109.32 | temperature | 20 | 14400 | < th | dose dependent | rect. | 5 | 1 |
| 908 | 109.33 | temperature | 30 | 1440 | > th | dose independent | rect. | 15 | 19 |
| 924 | 109.33 | wind | 1 | 14400 | < th | dose dependent | rect. | 4 | 19 |
| 928 | 109.34 | temperature | 25 | 1440 | > th | dose independent | rect. | 8 | 1 |
| 958 | 109.35 | wind | 1 | 14400 | > th | dose independent | rect. | 20 | 13 |
| 962 | 109.35 | temperature | 20 | 4320 | < th | dose independent | rect. | 3 | 23 |
| 966 | 109.35 | wind | 9 | 14400 | > th | dose dependent | rect. | 23 | 15 |
| 970 | 109.36 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |