Os11g0539600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cyclin-like F-box domain containing protein.
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Os11g0539600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cyclin-like F-box domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 45.07 | 0.315 | 2.92 | -0.263 | 0.0307 | 9.58 | -0.478 | -34.8 | 8.78 | 21.2 | 1.503 | 247 | -- | -- |
| 53.08 | 0.342 | 2.87 | -0.00419 | 0.0949 | -0.0903 | -0.311 | -- | 8.78 | 19.7 | -0.3812 | 36 | -- | -- |
| 45.56 | 0.314 | 2.94 | -0.303 | 0.0831 | 9.51 | -- | -34.9 | 8.79 | 17.2 | 1.326 | 227 | -- | -- |
| 53.07 | 0.339 | 2.87 | 0.0106 | 0.118 | -0.21 | -- | -- | 8.78 | 17.8 | -0.5415 | 59 | -- | -- |
| 45.91 | 0.316 | 2.93 | -0.293 | -- | 9.62 | -- | -35.2 | 8.78 | -- | 1.387 | 240 | -- | -- |
| 53.09 | 0.342 | 2.87 | -0.00532 | 0.0957 | -- | -0.307 | -- | 8.78 | 19.7 | -- | -- | -- | -- |
| 53.16 | 0.341 | 2.87 | 0.00474 | 0.115 | -- | -- | -- | 8.78 | 17.7 | -- | -- | -- | -- |
| 47.59 | 0.321 | 2.87 | -0.0357 | -- | 1.63 | -- | -- | 8.79 | -- | 1.5 | 218 | -- | -- |
| 53.08 | 0.339 | 2.87 | -- | 0.118 | -0.209 | -- | -- | 8.78 | 17.8 | -0.3861 | 56 | -- | -- |
| 53.85 | 0.343 | 2.87 | 0.00109 | -- | -- | -- | -- | 8.78 | -- | -- | -- | -- | -- |
| 53.16 | 0.341 | 2.87 | -- | 0.115 | -- | -- | -- | 8.78 | 17.7 | -- | -- | -- | -- |
| 47.62 | 0.321 | 2.87 | -- | -- | 1.62 | -- | -- | 8.79 | -- | 1.5 | 219 | -- | -- |
| 53.85 | 0.343 | 2.87 | -- | -- | -- | -- | -- | 8.78 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 45.06 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 16 | 1 |
| 2 | 45.06 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 16 | 1 |
| 3 | 45.06 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 16 | 3 |
| 7 | 45.13 | atmosphere | 1000.0 | 270 | < th | dose independent | rect. | 16 | 1 |
| 9 | 45.15 | temperature | 20.0 | 10 | < th | dose independent | rect. | 9 | 11 |
| 11 | 45.16 | temperature | 20.0 | 10 | < th | dose independent | rect. | 15 | 5 |
| 13 | 45.17 | temperature | 20.0 | 10 | < th | dose independent | rect. | 11 | 9 |
| 16 | 45.18 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 18 | 1 |
| 23 | 45.20 | atmosphere | 1000.0 | 270 | < th | dose dependent | rect. | 16 | 1 |
| 28 | 45.22 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 16 | 3 |
| 30 | 45.23 | temperature | 20.0 | 10 | < th | dose independent | rect. | 18 | 2 |
| 66 | 46.30 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 8 | 10 |
| 93 | 47.23 | atmosphere | 1005.0 | 10 | < th | dose independent | rect. | 20 | 1 |
| 105 | 47.74 | precipitation | 0.1 | 270 | > th | dose dependent | sin | 20 | NA |
| 110 | 47.84 | wind | 5.0 | 720 | > th | dose dependent | rect. | 3 | 2 |
| 113 | 47.87 | wind | 5.0 | 720 | > th | dose independent | rect. | 3 | 3 |
| 120 | 48.03 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 129 | 48.17 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 8 | 10 |
| 132 | 48.18 | wind | 5.0 | 720 | > th | dose independent | rect. | 4 | 1 |
| 154 | 48.32 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 18 | 1 |
| 163 | 48.35 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 15 | 1 |
| 165 | 48.35 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 15 | 1 |
| 182 | 48.43 | wind | 9.0 | 90 | > th | dose dependent | rect. | 10 | 1 |
| 183 | 48.44 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 15 | 1 |
| 184 | 48.44 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 15 | 1 |
| 193 | 48.46 | wind | 9.0 | 90 | > th | dose independent | rect. | 10 | 1 |
| 195 | 48.46 | wind | 5.0 | 10 | > th | dose dependent | rect. | 11 | 1 |
| 224 | 48.51 | radiation | 20.0 | 30 | < th | dose independent | rect. | 10 | 3 |
| 246 | 48.62 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 19 | 1 |
| 255 | 48.63 | wind | 9.0 | 90 | > th | dose independent | rect. | 18 | 17 |
| 360 | 48.92 | wind | 9.0 | 10 | > th | dose independent | rect. | 11 | 1 |
| 361 | 48.92 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 393 | 48.97 | wind | 9.0 | 1440 | < th | dose independent | rect. | 20 | 15 |
| 407 | 48.99 | wind | 9.0 | 1440 | < th | dose independent | rect. | 18 | 17 |
| 436 | 49.03 | wind | 9.0 | 90 | > th | dose dependent | rect. | 19 | 16 |
| 456 | 49.05 | wind | 7.0 | 10 | > th | dose dependent | rect. | 19 | 17 |
| 524 | 49.17 | temperature | 20.0 | 10 | < th | dose independent | sin | 21 | NA |
| 557 | 49.21 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 8 | 2 |
| 573 | 49.24 | wind | 7.0 | 90 | < th | dose independent | sin | 5 | NA |
| 636 | 49.33 | wind | 9.0 | 1440 | > th | dose independent | rect. | 20 | 15 |
| 638 | 49.33 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 12 | 5 |
| 661 | 49.36 | temperature | 20.0 | 10 | > th | dose independent | sin | 21 | NA |
| 704 | 49.41 | wind | 9.0 | 90 | > th | dose independent | sin | 7 | NA |
| 717 | 49.42 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 15 | 3 |
| 722 | 49.42 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 15 | 3 |
| 747 | 49.45 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 15 | 3 |
| 756 | 49.45 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 9 | 9 |
| 811 | 49.51 | wind | 7.0 | 90 | > th | dose dependent | sin | 6 | NA |
| 823 | 49.51 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 8 | 10 |
| 828 | 49.52 | wind | 9.0 | 10 | > th | dose independent | rect. | 19 | 17 |
| 830 | 49.52 | wind | 7.0 | 10 | > th | dose dependent | sin | 6 | NA |
| 958 | 49.61 | humidity | 70.0 | 30 | > th | dose dependent | rect. | 11 | 1 |