Os11g0537800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0537800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 139.19 | 0.554 | 12 | 1.3 | 1.24 | -1.96 | 1.32 | -0.937 | -0.129 | 7.61 | 21.6 | 1407 | -- | -- |
| 138.59 | 0.548 | 11.9 | 1.39 | 1.24 | -1.73 | 1.52 | -- | -0.0555 | 7.57 | 22.1 | 1447 | -- | -- |
| 144.14 | 0.559 | 12 | 1.3 | 1.24 | -1.96 | -- | -0.937 | -0.129 | 7.61 | 21.6 | 1407 | -- | -- |
| 143.76 | 0.558 | 11.9 | 1.43 | 1.25 | -1.74 | -- | -- | -0.0548 | 7.63 | 22.11 | 1438 | -- | -- |
| 199.04 | 0.657 | 12 | 1.13 | -- | -1.75 | -- | -0.801 | -0.11 | -- | 22.06 | 764 | -- | -- |
| 248.72 | 0.739 | 12 | 0.759 | 1.23 | -- | 1.28 | -- | -0.626 | 7.81 | -- | -- | -- | -- |
| 253.41 | 0.745 | 12 | 0.793 | 1.23 | -- | -- | -- | -0.627 | 7.87 | -- | -- | -- | -- |
| 201.13 | 0.661 | 12 | 1.39 | -- | -1.74 | -- | -- | -0.0509 | -- | 22.08 | 761 | -- | -- |
| 189.32 | 0.641 | 12 | -- | 1.2 | -1.35 | -- | -- | -0.302 | 7.27 | 22.34 | 1158 | -- | -- |
| 335.87 | 0.856 | 12.1 | 0.807 | -- | -- | -- | -- | -0.611 | -- | -- | -- | -- | -- |
| 269.98 | 0.769 | 12.1 | -- | 1.24 | -- | -- | -- | -0.716 | 7.83 | -- | -- | -- | -- |
| 247.5 | 0.733 | 12 | -- | -- | -1.39 | -- | -- | -0.316 | -- | 22.3 | 741 | -- | -- |
| 353.03 | 0.877 | 12.1 | -- | -- | -- | -- | -- | -0.7 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 142.28 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 13 |
| 26 | 143.40 | temperature | 25 | 1440 | < th | dose dependent | sin | 12 | NA |
| 40 | 143.81 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 2 |
| 43 | 143.82 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 4 |
| 44 | 143.82 | temperature | 15 | 1440 | > th | dose dependent | rect. | 24 | 6 |
| 89 | 144.47 | temperature | 15 | 1440 | > th | dose dependent | rect. | 3 | 2 |
| 135 | 145.01 | temperature | 15 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 152 | 145.27 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 173 | 145.46 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 2 |
| 232 | 146.18 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 275 | 146.69 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 342 | 147.49 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 4 |
| 364 | 147.79 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 4 |
| 436 | 148.57 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 450 | 148.69 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 23 |
| 467 | 148.88 | temperature | 25 | 1440 | < th | dose dependent | rect. | 24 | 23 |
| 507 | 149.30 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 23 |
| 580 | 150.27 | temperature | 15 | 1440 | > th | dose dependent | sin | 10 | NA |
| 777 | 152.30 | temperature | 20 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 815 | 152.59 | temperature | 20 | 1440 | > th | dose independent | rect. | 20 | 11 |
| 933 | 153.51 | temperature | 15 | 720 | > th | dose dependent | rect. | 19 | 21 |
| 966 | 153.70 | temperature | 20 | 1440 | < th | dose independent | rect. | 20 | 11 |