Os11g0537300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Germin family protein.
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Os11g0537300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Germin family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 26.29 | 0.241 | 2.97 | 0.536 | 0.123 | -0.324 | -0.178 | 3.04 | 0.0391 | 7.98 | 29.91 | 1627 | -- | -- |
| 27.04 | 0.244 | 3.03 | -0.00838 | 0.137 | 0.043 | -0.196 | -- | -0.00349 | 7.57 | 29.91 | 1627 | -- | -- |
| 26.33 | 0.239 | 2.97 | 0.529 | 0.127 | -0.327 | -- | 3.21 | 0.0512 | 8.19 | 29.84 | 1813 | -- | -- |
| 27.14 | 0.244 | 3.03 | -0.013 | 0.136 | 0.0439 | -- | -- | -0.00302 | 7.74 | 29.91 | 1627 | -- | -- |
| 27.09 | 0.242 | 2.97 | 0.589 | -- | -0.393 | -- | 3.54 | 0.0608 | -- | 29.88 | 1819 | -- | -- |
| 27.1 | 0.244 | 3.03 | -0.00276 | 0.133 | -- | -0.194 | -- | -0.00486 | 7.84 | -- | -- | -- | -- |
| 27.21 | 0.244 | 3.03 | -0.00752 | 0.132 | -- | -- | -- | -0.00444 | 8.09 | -- | -- | -- | -- |
| 28.12 | 0.247 | 3.04 | -0.0131 | -- | 0.0407 | -- | -- | 0.00505 | -- | 29.8 | 4369 | -- | -- |
| 27.14 | 0.244 | 3.03 | -- | 0.136 | 0.047 | -- | -- | -0.00182 | 7.74 | 30.02 | 2150 | -- | -- |
| 28.17 | 0.248 | 3.04 | -0.00635 | -- | -- | -- | -- | -0.00282 | -- | -- | -- | -- | -- |
| 27.21 | 0.244 | 3.03 | -- | 0.132 | -- | -- | -- | -0.0036 | 8.09 | -- | -- | -- | -- |
| 28.12 | 0.247 | 3.04 | -- | -- | 0.0337 | -- | -- | 0.00319 | -- | 29.82 | 4372 | -- | -- |
| 28.17 | 0.248 | 3.04 | -- | -- | -- | -- | -- | -0.00212 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 22.05 | humidity | 80.0 | 90 | < th | dose independent | rect. | 2 | 5 |
| 8 | 22.47 | humidity | 80.0 | 10 | < th | dose dependent | rect. | 7 | 1 |
| 12 | 22.48 | humidity | 80.0 | 10 | < th | dose dependent | rect. | 2 | 6 |
| 20 | 22.50 | humidity | 80.0 | 90 | < th | dose independent | rect. | 6 | 2 |
| 40 | 22.59 | radiation | 10.0 | 30 | > th | dose dependent | rect. | 6 | 2 |
| 52 | 22.59 | humidity | 80.0 | 10 | < th | dose dependent | rect. | 20 | 12 |
| 64 | 22.71 | humidity | 70.0 | 10 | < th | dose independent | rect. | 7 | 1 |
| 189 | 22.74 | radiation | 20.0 | 90 | > th | dose independent | rect. | 6 | 1 |
| 627 | 23.34 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 7 | 1 |
| 795 | 23.90 | radiation | 30.0 | 30 | < th | dose independent | sin | 11 | NA |
| 857 | 24.26 | radiation | 20.0 | 10 | > th | dose independent | sin | 11 | NA |
| 858 | 24.26 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 859 | 24.28 | wind | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 860 | 24.31 | wind | 3.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 864 | 24.32 | temperature | 25.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 865 | 24.32 | wind | 9.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 874 | 24.33 | temperature | 10.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 877 | 24.33 | humidity | 50.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 881 | 24.33 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 882 | 24.33 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 884 | 24.33 | radiation | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 889 | 24.33 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 2 | 1 |
| 891 | 24.33 | temperature | 10.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 892 | 24.33 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 894 | 24.33 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 896 | 24.33 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 901 | 24.33 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 913 | 24.36 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 920 | 24.39 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 921 | 24.39 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 928 | 24.43 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 2 | 1 |