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Os11g0535600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : C2 calcium/lipid-binding region, CaLB domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.5 (0.0181) R2 : 0.641
β1 : 1.74 (0.0663) R2dD : 0.564 R2D : 0.374
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.615 (0.0387) R2dN8 : 0.267 R2N8 : 0.0768
σ : 0.34
deviance : 52.94
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
39.59 0.296 10.4 2.02 0.224 -0.885 0.0633 1.28 0.717 18.7 24.88 117 -- --
40.04 0.297 10.5 1.85 0.142 -0.783 0.0857 -- 0.678 17.9 24.88 117 -- --
39.6 0.293 10.4 2.02 0.225 -0.891 -- 1.32 0.719 18.6 24.88 116 -- --
40.03 0.297 10.5 1.85 0.142 -0.787 -- -- 0.675 17.7 25 111 -- --
40.54 0.298 10.4 1.93 -- -0.78 -- 0.888 0.684 -- 25.21 75 -- --
49.42 0.33 10.5 1.74 0.228 -- 0.277 -- 0.612 1.19 -- -- -- --
49.74 0.33 10.5 1.73 0.227 -- -- -- 0.61 1.15 -- -- -- --
40.87 0.299 10.5 1.84 -- -0.716 -- -- 0.658 -- 25.26 62 -- --
127.05 0.528 10.5 -- 0.156 -0.352 -- -- 0.424 0.381 26.25 54 -- --
52.94 0.34 10.5 1.74 -- -- -- -- 0.615 -- -- -- -- --
128.94 0.531 10.5 -- 0.257 -- -- -- 0.417 1.41 -- -- -- --
128.11 0.529 10.5 -- -- -0.452 -- -- 0.442 -- 25.26 62 -- --
133 0.538 10.5 -- -- -- -- -- 0.422 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 37.21 wind 3 43200 < th dose dependent rect. 4 1
3 37.81 radiation 20 4320 < th dose independent rect. 16 17
5 37.85 wind 1 43200 > th dose dependent rect. 4 2
6 37.87 humidity 80 14400 > th dose dependent rect. 22 1
7 37.87 temperature 20 10 > th dose dependent rect. 5 18
8 37.89 wind 9 43200 < th dose dependent rect. 4 2
9 37.91 radiation 20 4320 < th dose independent rect. 2 7
11 37.91 radiation 20 4320 < th dose independent rect. 22 11
14 37.91 wind 3 43200 > th dose dependent rect. 7 1
16 37.92 radiation 20 4320 < th dose independent rect. 5 4
46 38.14 radiation 20 4320 > th dose dependent rect. 16 16
48 38.17 wind 3 43200 > th dose dependent rect. 5 4
64 38.32 wind 9 43200 < th dose dependent rect. 3 5
66 38.33 wind 1 43200 > th dose dependent rect. 3 5
70 38.34 temperature 20 10 > th dose dependent rect. 2 21
80 38.38 radiation 20 4320 < th dose independent sin 11 NA
85 38.40 wind 5 43200 < th dose independent rect. 5 5
86 38.40 radiation 10 4320 > th dose dependent rect. 7 1
91 38.41 wind 5 43200 < th dose independent rect. 6 2
99 38.44 wind 5 43200 > th dose independent rect. 5 5
104 38.45 wind 5 43200 > th dose independent rect. 6 2
110 38.47 humidity 80 14400 > th dose independent rect. 18 1
123 38.50 radiation 1 14400 < th dose independent rect. 24 6
124 38.50 humidity 50 14400 > th dose dependent rect. 22 1
131 38.51 radiation 1 14400 < th dose independent rect. 4 2
142 38.52 radiation 1 14400 > th dose independent rect. 4 2
222 38.61 radiation 10 14400 < th dose independent rect. 17 3
223 38.61 radiation 10 14400 < th dose independent rect. 17 9
228 38.62 radiation 20 4320 > th dose independent rect. 7 1
354 38.73 humidity 80 14400 > th dose independent rect. 17 3
373 38.75 humidity 60 43200 > th dose independent rect. 16 1
384 38.77 wind 9 43200 < th dose dependent rect. 7 2
412 38.80 humidity 80 14400 > th dose independent rect. 16 7
419 38.81 temperature 15 720 > th dose dependent rect. 6 7
422 38.82 humidity 60 43200 > th dose independent rect. 14 20
424 38.82 humidity 70 14400 < th dose dependent rect. 18 2
480 38.87 humidity 80 14400 < th dose independent rect. 17 2
552 38.91 radiation 40 4320 < th dose dependent rect. 7 1
557 38.91 temperature 30 720 < th dose dependent rect. 5 8
584 38.94 humidity 60 43200 < th dose independent rect. 14 20
588 38.94 temperature 20 10 > th dose dependent rect. 9 14
633 39.00 wind 5 43200 > th dose independent rect. 9 1
643 39.00 temperature 20 720 > th dose dependent rect. 3 10
648 39.01 humidity 80 14400 < th dose independent rect. 16 6
650 39.01 radiation 1 14400 > th dose independent rect. 17 13
657 39.01 temperature 20 10 > th dose dependent rect. 5 16
658 39.01 temperature 20 10 > th dose dependent rect. 7 16
663 39.02 wind 9 43200 < th dose dependent rect. 7 4
671 39.02 radiation 40 4320 < th dose dependent rect. 17 16
687 39.03 temperature 20 90 > th dose dependent rect. 8 15
692 39.04 humidity 60 43200 > th dose independent rect. 15 5
726 39.05 humidity 60 43200 < th dose independent rect. 14 12
734 39.06 humidity 60 43200 < th dose independent rect. 15 2
745 39.06 humidity 70 14400 > th dose independent rect. 19 13
755 39.06 radiation 40 4320 < th dose dependent rect. 2 6
771 39.07 humidity 60 43200 < th dose independent rect. 14 9
785 39.07 radiation 40 4320 < th dose dependent rect. 22 10
791 39.07 humidity 80 14400 > th dose dependent rect. 18 16
801 39.08 humidity 60 43200 > th dose independent rect. 14 13
918 39.16 humidity 90 14400 < th dose dependent rect. 21 2
932 39.17 wind 3 43200 > th dose dependent sin 6 NA
988 39.21 humidity 80 14400 > th dose dependent sin 14 NA