Os11g0533800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cyclin-like F-box domain containing protein.
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Os11g0533800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cyclin-like F-box domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 90.6 | 0.447 | 6.82 | 0.965 | 0.979 | -2.96 | 0.425 | -0.627 | 0.604 | 10.9 | 24.9 | 861 | -- | -- |
| 91.04 | 0.444 | 6.83 | 0.864 | 0.992 | -2.89 | 0.34 | -- | 0.572 | 10.8 | 25.07 | 857 | -- | -- |
| 91.24 | 0.445 | 6.82 | 0.929 | 0.979 | -2.94 | -- | -0.322 | 0.591 | 10.9 | 24.98 | 863 | -- | -- |
| 91.37 | 0.445 | 6.83 | 0.871 | 0.982 | -2.9 | -- | -- | 0.577 | 10.9 | 25.07 | 863 | -- | -- |
| 120.49 | 0.511 | 6.85 | 0.857 | -- | -2.88 | -- | -0.229 | 0.588 | -- | 25.19 | 1601 | -- | -- |
| 213.67 | 0.685 | 6.7 | 1.69 | 0.576 | -- | 0.417 | -- | 1.18 | 10.7 | -- | -- | -- | -- |
| 214.39 | 0.686 | 6.7 | 1.71 | 0.573 | -- | -- | -- | 1.19 | 10.7 | -- | -- | -- | -- |
| 120.72 | 0.512 | 6.86 | 0.795 | -- | -2.91 | -- | -- | 0.562 | -- | 25.21 | 1594 | -- | -- |
| 108.45 | 0.485 | 6.87 | -- | 0.975 | -3.29 | -- | -- | 0.413 | 11.2 | 25 | 975 | -- | -- |
| 234.71 | 0.716 | 6.72 | 1.69 | -- | -- | -- | -- | 1.18 | -- | -- | -- | -- | -- |
| 291.06 | 0.798 | 6.75 | -- | 0.562 | -- | -- | -- | 0.995 | 10.5 | -- | -- | -- | -- |
| 134.68 | 0.541 | 6.89 | -- | -- | -3.31 | -- | -- | 0.406 | -- | 25 | 1624 | -- | -- |
| 310.42 | 0.822 | 6.76 | -- | -- | -- | -- | -- | 0.994 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 90.83 | temperature | 25 | 720 | < th | dose dependent | rect. | 16 | 22 |
| 4 | 91.07 | temperature | 25 | 720 | < th | dose dependent | rect. | 19 | 23 |
| 17 | 91.43 | temperature | 25 | 720 | < th | dose dependent | rect. | 23 | 23 |
| 19 | 91.56 | temperature | 25 | 720 | < th | dose dependent | rect. | 13 | 23 |
| 28 | 91.69 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 50 | 92.81 | temperature | 25 | 720 | < th | dose dependent | rect. | 8 | 23 |
| 113 | 96.39 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 16 |
| 189 | 97.51 | temperature | 15 | 720 | > th | dose dependent | rect. | 19 | 20 |
| 304 | 98.80 | temperature | 25 | 1440 | < th | dose dependent | sin | 15 | NA |
| 336 | 99.06 | temperature | 25 | 1440 | < th | dose dependent | sin | 4 | NA |
| 358 | 99.39 | temperature | 30 | 720 | < th | dose dependent | sin | 10 | NA |
| 360 | 99.40 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 11 |
| 361 | 99.40 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 13 |
| 387 | 99.57 | temperature | 25 | 1440 | < th | dose dependent | rect. | 19 | 5 |
| 401 | 99.70 | temperature | 10 | 720 | > th | dose dependent | sin | 10 | NA |
| 430 | 99.94 | temperature | 25 | 1440 | < th | dose dependent | rect. | 15 | 11 |
| 447 | 100.11 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 2 |
| 619 | 102.38 | temperature | 10 | 1440 | > th | dose dependent | rect. | 19 | 11 |
| 629 | 102.56 | temperature | 10 | 1440 | > th | dose dependent | rect. | 5 | 1 |
| 648 | 102.72 | temperature | 30 | 1440 | < th | dose dependent | rect. | 5 | 1 |
| 762 | 103.39 | temperature | 10 | 1440 | > th | dose dependent | rect. | 22 | 2 |
| 844 | 103.73 | temperature | 10 | 1440 | > th | dose dependent | rect. | 20 | 6 |