Os11g0533400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0533400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 216.42 | 0.691 | 4.06 | 0.48 | 0.77 | -0.763 | 0.722 | 0.112 | -0.00127 | 8.46 | 22.3 | 695 | -- | -- |
| 216.46 | 0.685 | 4.06 | 0.445 | 0.773 | -0.76 | 0.677 | -- | -0.0133 | 8.47 | 22.25 | 695 | -- | -- |
| 217.84 | 0.687 | 4.07 | 0.414 | 0.775 | -0.754 | -- | -0.161 | -0.0269 | 8.48 | 22.26 | 696 | -- | -- |
| 217.92 | 0.688 | 4.06 | 0.465 | 0.769 | -0.761 | -- | -- | -0.0106 | 8.47 | 22.24 | 695 | -- | -- |
| 249.4 | 0.736 | 4.07 | 0.48 | -- | -0.943 | -- | -0.15 | 0.0457 | -- | 22.2 | 745 | -- | -- |
| 243.13 | 0.731 | 4.12 | 0.2 | 0.917 | -- | 0.641 | -- | -0.267 | 8.61 | -- | -- | -- | -- |
| 244.47 | 0.732 | 4.12 | 0.22 | 0.915 | -- | -- | -- | -0.266 | 8.61 | -- | -- | -- | -- |
| 249.15 | 0.735 | 4.07 | 0.571 | -- | -0.99 | -- | -- | 0.056 | -- | 21.89 | 728 | -- | -- |
| 223.32 | 0.696 | 4.08 | -- | 0.791 | -0.674 | -- | -- | -0.0834 | 8.38 | 22.34 | 727 | -- | -- |
| 291.61 | 0.798 | 4.14 | 0.223 | -- | -- | -- | -- | -0.258 | -- | -- | -- | -- | -- |
| 245.75 | 0.733 | 4.12 | -- | 0.916 | -- | -- | -- | -0.291 | 8.6 | -- | -- | -- | -- |
| 256.44 | 0.746 | 4.09 | -- | -- | -0.849 | -- | -- | -0.0289 | -- | 22.21 | 707 | -- | -- |
| 292.93 | 0.799 | 4.15 | -- | -- | -- | -- | -- | -0.283 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 216.52 | temperature | 15 | 270 | > th | dose dependent | sin | 7 | NA |
| 2 | 216.53 | temperature | 25 | 270 | < th | dose dependent | rect. | 24 | 10 |
| 4 | 216.70 | temperature | 25 | 270 | < th | dose dependent | rect. | 24 | 20 |
| 18 | 218.13 | temperature | 25 | 270 | < th | dose dependent | sin | 6 | NA |
| 36 | 218.73 | temperature | 25 | 720 | < th | dose dependent | sin | 11 | NA |
| 40 | 218.88 | temperature | 20 | 270 | > th | dose dependent | rect. | 22 | 12 |
| 41 | 218.88 | temperature | 25 | 720 | < th | dose dependent | rect. | 18 | 14 |
| 42 | 218.89 | temperature | 25 | 720 | < th | dose dependent | rect. | 19 | 12 |
| 48 | 219.00 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 8 |
| 52 | 219.03 | temperature | 25 | 720 | < th | dose dependent | rect. | 21 | 9 |
| 55 | 219.12 | temperature | 25 | 720 | < th | dose dependent | rect. | 23 | 5 |
| 183 | 220.43 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 14 |
| 281 | 221.33 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 300 | 221.44 | temperature | 25 | 720 | < th | dose dependent | rect. | 10 | 22 |
| 328 | 221.60 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 343 | 221.68 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 382 | 221.98 | temperature | 25 | 720 | < th | dose dependent | rect. | 5 | 23 |
| 426 | 222.28 | temperature | 25 | 720 | < th | dose dependent | rect. | 3 | 23 |
| 452 | 222.42 | temperature | 20 | 720 | > th | dose independent | rect. | 21 | 10 |
| 469 | 222.57 | temperature | 20 | 720 | > th | dose independent | rect. | 21 | 19 |
| 491 | 222.71 | temperature | 20 | 720 | > th | dose independent | rect. | 21 | 14 |
| 503 | 222.80 | temperature | 20 | 720 | > th | dose independent | rect. | 21 | 12 |
| 537 | 223.01 | temperature | 20 | 720 | > th | dose independent | rect. | 19 | 16 |
| 554 | 223.12 | temperature | 20 | 720 | > th | dose independent | sin | 9 | NA |
| 562 | 223.15 | wind | 9 | 14400 | < th | dose independent | rect. | 5 | 8 |
| 574 | 223.22 | temperature | 20 | 720 | < th | dose independent | rect. | 23 | 6 |
| 591 | 223.29 | temperature | 20 | 30 | > th | dose dependent | rect. | 23 | 17 |
| 600 | 223.36 | temperature | 20 | 270 | < th | dose independent | rect. | 24 | 20 |
| 612 | 223.40 | wind | 7 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 622 | 223.46 | temperature | 20 | 720 | > th | dose independent | rect. | 12 | 19 |
| 623 | 223.46 | temperature | 20 | 720 | > th | dose independent | rect. | 12 | 21 |
| 624 | 223.46 | temperature | 20 | 720 | > th | dose independent | rect. | 12 | 23 |
| 629 | 223.48 | temperature | 20 | 720 | < th | dose independent | sin | 9 | NA |
| 639 | 223.51 | wind | 9 | 14400 | > th | dose dependent | rect. | 6 | 7 |
| 648 | 223.54 | wind | 9 | 14400 | > th | dose independent | rect. | 5 | 8 |
| 665 | 223.60 | wind | 3 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 681 | 223.68 | wind | 9 | 14400 | > th | dose dependent | rect. | 9 | 4 |
| 701 | 223.73 | temperature | 30 | 1440 | < th | dose dependent | rect. | 4 | 1 |
| 740 | 223.81 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 21 |
| 745 | 223.84 | wind | 1 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 753 | 223.86 | temperature | 15 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 754 | 223.87 | temperature | 20 | 720 | < th | dose independent | rect. | 19 | 17 |
| 761 | 223.88 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 9 |
| 783 | 223.93 | wind | 9 | 14400 | > th | dose independent | rect. | 9 | 4 |
| 791 | 223.94 | temperature | 20 | 720 | < th | dose independent | rect. | 21 | 15 |
| 796 | 223.95 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 9 |
| 806 | 223.97 | temperature | 20 | 270 | < th | dose independent | rect. | 24 | 17 |
| 818 | 223.99 | temperature | 15 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 855 | 224.06 | temperature | 10 | 1440 | > th | dose dependent | rect. | 24 | 1 |
| 984 | 224.25 | temperature | 20 | 720 | < th | dose independent | rect. | 19 | 12 |