Os11g0533000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os11g0533000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 114.1 | 0.502 | 8 | 0.586 | 1.44 | 0.482 | 1.39 | 2.79 | -0.796 | 18.7 | 16.88 | 4270 | -- | -- |
| 118.39 | 0.507 | 8.07 | -0.0281 | 1.42 | 0.438 | 1.31 | -- | -0.833 | 18.7 | 29.73 | 3810 | -- | -- |
| 118.7 | 0.507 | 8 | 0.549 | 1.42 | 0.489 | -- | 2.72 | -0.795 | 18.6 | 16.89 | 4963 | -- | -- |
| 118.08 | 0.506 | 8.1 | -0.111 | 1.17 | 0.76 | -- | -- | -0.936 | 18.9 | 26.19 | 347 | -- | -- |
| 218.06 | 0.692 | 8.05 | 0.217 | -- | 0.792 | -- | 2.3 | -0.952 | -- | 16.89 | 4963 | -- | -- |
| 125.44 | 0.525 | 8.09 | 0.0833 | 1.43 | -- | 1.31 | -- | -0.9 | 18.8 | -- | -- | -- | -- |
| 129.81 | 0.534 | 8.09 | 0.062 | 1.43 | -- | -- | -- | -0.896 | 18.7 | -- | -- | -- | -- |
| 157.39 | 0.584 | 8.09 | -0.248 | -- | 1.67 | -- | -- | -1.04 | -- | 25 | 476 | -- | -- |
| 117.7 | 0.505 | 8.09 | -- | 1.1 | 0.815 | -- | -- | -0.924 | 19.1 | 26 | 367 | -- | -- |
| 236.95 | 0.719 | 8.06 | 0.0293 | -- | -- | -- | -- | -0.924 | -- | -- | -- | -- | -- |
| 129.91 | 0.533 | 8.09 | -- | 1.43 | -- | -- | -- | -0.903 | 18.7 | -- | -- | -- | -- |
| 158.98 | 0.587 | 8.08 | -- | -- | 1.62 | -- | -- | -1.01 | -- | 25 | 470 | -- | -- |
| 236.98 | 0.719 | 8.06 | -- | -- | -- | -- | -- | -0.928 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 113.75 | temperature | 15 | 4320 | > th | dose dependent | rect. | 24 | 1 |
| 3 | 113.81 | temperature | 30 | 4320 | < th | dose dependent | rect. | 24 | 1 |
| 5 | 113.87 | temperature | 15 | 4320 | > th | dose dependent | rect. | 21 | 6 |
| 19 | 113.93 | temperature | 30 | 4320 | < th | dose dependent | rect. | 21 | 6 |
| 23 | 113.93 | temperature | 15 | 4320 | > th | dose dependent | rect. | 21 | 16 |
| 46 | 113.97 | temperature | 15 | 4320 | > th | dose dependent | rect. | 11 | 18 |
| 84 | 114.02 | temperature | 15 | 4320 | > th | dose dependent | sin | 12 | NA |
| 111 | 114.04 | temperature | 15 | 4320 | > th | dose dependent | sin | 8 | NA |
| 117 | 114.04 | temperature | 30 | 4320 | < th | dose dependent | rect. | 17 | 11 |
| 223 | 114.10 | temperature | 30 | 4320 | < th | dose dependent | rect. | 21 | 16 |
| 245 | 114.11 | temperature | 20 | 270 | > th | dose dependent | rect. | 15 | 18 |
| 253 | 114.12 | temperature | 30 | 4320 | < th | dose dependent | sin | 12 | NA |
| 355 | 114.16 | temperature | 30 | 4320 | < th | dose dependent | rect. | 11 | 18 |
| 473 | 114.21 | temperature | 15 | 4320 | > th | dose dependent | no | NA | NA |
| 751 | 114.31 | temperature | 20 | 10 | > th | dose dependent | rect. | 17 | 16 |
| 874 | 114.37 | temperature | 30 | 4320 | < th | dose dependent | no | NA | NA |
| 931 | 114.39 | temperature | 30 | 4320 | < th | dose dependent | rect. | 23 | 23 |