Os11g0532200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os11g0532200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 130.5 | 0.537 | 8.55 | 1.78 | 1.19 | -1.49 | 0.356 | 1.42 | -0.0354 | 22.4 | 25.35 | 1411 | -- | -- |
| 131.28 | 0.534 | 8.6 | 1.41 | 1.18 | -1.35 | 0.362 | -- | -0.154 | 22.4 | 25.4 | 1398 | -- | -- |
| 131.01 | 0.533 | 8.55 | 1.78 | 1.19 | -1.49 | -- | 1.49 | -0.0376 | 22.4 | 25.4 | 1410 | -- | -- |
| 127.77 | 0.526 | 8.59 | 1.47 | 1.16 | -1.46 | -- | -- | -0.0818 | 22.3 | 25.88 | 5776 | -- | -- |
| 214.94 | 0.683 | 8.54 | 1.65 | -- | -1.39 | -- | 1.09 | -0.0762 | -- | 25.35 | 1504 | -- | -- |
| 209.09 | 0.678 | 8.63 | 0.905 | 1.12 | -- | 0.293 | -- | -0.278 | 22 | -- | -- | -- | -- |
| 209.42 | 0.678 | 8.63 | 0.893 | 1.12 | -- | -- | -- | -0.279 | 22 | -- | -- | -- | -- |
| 204.4 | 0.666 | 8.57 | 1.4 | -- | -1.38 | -- | -- | -0.171 | -- | 26.6 | 5860 | -- | -- |
| 173.67 | 0.614 | 8.61 | -- | 1.13 | -1.01 | -- | -- | -0.209 | 22.4 | 27.9 | 7142 | -- | -- |
| 284.52 | 0.788 | 8.6 | 0.907 | -- | -- | -- | -- | -0.278 | -- | -- | -- | -- | -- |
| 230.45 | 0.71 | 8.65 | -- | 1.12 | -- | -- | -- | -0.378 | 22.1 | -- | -- | -- | -- |
| 249.35 | 0.735 | 8.58 | -- | -- | -1.04 | -- | -- | -0.218 | -- | 28.58 | 7267 | -- | -- |
| 306.23 | 0.817 | 8.62 | -- | -- | -- | -- | -- | -0.378 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 128.62 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 8 |
| 15 | 129.22 | temperature | 25 | 1440 | > th | dose dependent | rect. | 12 | 21 |
| 19 | 129.30 | temperature | 30 | 14400 | < th | dose independent | rect. | 14 | 15 |
| 23 | 129.32 | temperature | 30 | 14400 | < th | dose independent | rect. | 14 | 5 |
| 32 | 129.33 | temperature | 30 | 14400 | < th | dose independent | rect. | 14 | 12 |
| 40 | 129.43 | temperature | 30 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 51 | 129.55 | temperature | 30 | 14400 | > th | dose independent | rect. | 14 | 5 |
| 79 | 129.59 | temperature | 25 | 1440 | > th | dose dependent | sin | 18 | NA |
| 87 | 129.66 | temperature | 30 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 122 | 129.81 | temperature | 25 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 152 | 130.21 | temperature | 25 | 1440 | > th | dose dependent | rect. | 1 | 20 |
| 205 | 130.51 | temperature | 25 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 223 | 130.62 | temperature | 25 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 255 | 130.78 | temperature | 30 | 14400 | < th | dose independent | sin | 14 | NA |
| 258 | 130.79 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 269 | 130.83 | temperature | 25 | 1440 | > th | dose dependent | rect. | 5 | 23 |
| 277 | 130.86 | temperature | 25 | 4320 | > th | dose independent | rect. | 7 | 2 |
| 294 | 130.94 | temperature | 30 | 14400 | > th | dose independent | sin | 14 | NA |
| 317 | 131.02 | humidity | 70 | 14400 | < th | dose independent | rect. | 18 | 13 |
| 328 | 131.06 | humidity | 70 | 14400 | < th | dose independent | rect. | 18 | 4 |
| 337 | 131.07 | temperature | 25 | 1440 | > th | dose dependent | rect. | 18 | 23 |
| 358 | 131.19 | temperature | 25 | 14400 | > th | dose dependent | rect. | 16 | 4 |
| 405 | 131.60 | radiation | 10 | 1440 | < th | dose dependent | rect. | 17 | 13 |
| 406 | 131.60 | radiation | 40 | 1440 | < th | dose dependent | rect. | 17 | 13 |
| 457 | 131.95 | temperature | 30 | 1440 | < th | dose independent | rect. | 14 | 16 |
| 479 | 131.99 | temperature | 30 | 1440 | < th | dose independent | rect. | 14 | 6 |
| 490 | 132.05 | temperature | 30 | 1440 | < th | dose independent | rect. | 14 | 10 |
| 496 | 132.08 | wind | 3 | 43200 | > th | dose independent | rect. | 3 | 7 |
| 504 | 132.11 | humidity | 70 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 506 | 132.11 | temperature | 25 | 14400 | > th | dose dependent | rect. | 15 | 15 |
| 562 | 132.28 | temperature | 30 | 1440 | < th | dose independent | rect. | 15 | 2 |
| 624 | 132.70 | temperature | 30 | 1440 | > th | dose independent | rect. | 14 | 4 |
| 650 | 132.73 | temperature | 30 | 1440 | < th | dose independent | rect. | 11 | 18 |
| 656 | 132.75 | temperature | 30 | 1440 | < th | dose independent | rect. | 11 | 9 |
| 683 | 132.79 | temperature | 30 | 1440 | < th | dose independent | rect. | 11 | 13 |
| 710 | 132.85 | temperature | 25 | 14400 | > th | dose dependent | sin | 15 | NA |
| 712 | 132.86 | wind | 3 | 43200 | < th | dose independent | rect. | 3 | 7 |
| 722 | 132.91 | wind | 5 | 43200 | < th | dose dependent | rect. | 8 | 2 |
| 723 | 132.92 | wind | 3 | 43200 | > th | dose independent | rect. | 7 | 3 |
| 726 | 132.93 | temperature | 30 | 1440 | < th | dose independent | sin | 17 | NA |
| 727 | 132.93 | temperature | 30 | 1440 | > th | dose independent | rect. | 15 | 2 |
| 748 | 132.95 | radiation | 40 | 1440 | < th | dose dependent | rect. | 16 | 15 |
| 810 | 133.28 | wind | 3 | 43200 | > th | dose dependent | rect. | 5 | 2 |
| 826 | 133.33 | wind | 1 | 43200 | > th | dose dependent | rect. | 6 | 4 |
| 861 | 133.42 | wind | 3 | 43200 | > th | dose dependent | rect. | 5 | 9 |
| 881 | 133.50 | wind | 1 | 43200 | > th | dose dependent | rect. | 8 | 2 |
| 887 | 133.52 | wind | 3 | 43200 | > th | dose dependent | rect. | 3 | 12 |
| 893 | 133.54 | wind | 3 | 43200 | > th | dose dependent | sin | 4 | NA |
| 925 | 133.69 | wind | 1 | 43200 | > th | dose dependent | rect. | 6 | 6 |
| 930 | 133.70 | wind | 1 | 43200 | > th | dose dependent | rect. | 3 | 9 |
| 950 | 133.78 | wind | 9 | 43200 | < th | dose dependent | rect. | 3 | 9 |
| 973 | 133.85 | wind | 1 | 43200 | > th | dose dependent | rect. | 3 | 7 |
| 995 | 133.92 | wind | 3 | 43200 | < th | dose independent | rect. | 7 | 3 |
| 1000 | 133.92 | radiation | 1 | 1440 | > th | dose dependent | rect. | 16 | 15 |