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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os11g0531800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 5.56 (0.0319) R2 : 0.697
β1 : 1.14 (0.117) R2dD : 0.0652 R2D : 0.0226
β2 : 2.43 (0.0822) R2dC : 0.586 R2C : 0.545
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.78 (0.0681) R2dN8 : 0.117 R2N8 : 0.0494
σ : 0.6
deviance : 164
__
_____
C
peak time of C : 19.4
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
146.89 0.569 5.54 1.1 2.6 0.706 1.78 -0.322 0.897 19.1 91.11 22 -- --
147.07 0.565 5.54 1.1 2.61 0.703 1.84 -- 0.894 19.1 91.44 21 -- --
155.03 0.58 5.54 1.09 2.6 0.721 -- -0.498 0.913 19 91.46 24 -- --
155.66 0.581 5.54 1.07 2.59 0.598 -- -- 0.885 19.1 91 21 -- --
290.34 0.794 5.51 1.23 -- -2.36 -- -2.16 0.667 -- 67.64 568 -- --
157.76 0.589 5.56 1.17 2.43 -- 1.51 -- 0.777 19.4 -- -- -- --
164 0.6 5.56 1.14 2.43 -- -- -- 0.78 19.4 -- -- -- --
287.26 0.789 5.53 1.11 -- -2.45 -- -- 0.595 -- 64.89 559 -- --
185.31 0.634 5.56 -- 2.61 0.735 -- -- 0.79 19 91.02 24 -- --
479.33 1.02 5.5 1.1 -- -- -- -- 0.741 -- -- -- -- --
198 0.658 5.59 -- 2.42 -- -- -- 0.654 19.4 -- -- -- --
319.56 0.833 5.56 -- -- -2.51 -- -- 0.501 -- 62.85 567 -- --
511.05 1.06 5.53 -- -- -- -- -- 0.619 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 137.29 temperature 15.0 270 > th dose dependent rect. 10 7
2 137.44 temperature 25.0 270 > th dose independent rect. 10 7
17 138.92 radiation 10.0 30 > th dose independent rect. 6 6
34 139.61 atmosphere 1010.0 270 < th dose independent rect. 10 8
36 139.77 wind 7.0 270 < th dose independent rect. 10 8
55 140.12 wind 7.0 270 < th dose independent rect. 9 22
65 140.39 wind 7.0 270 < th dose independent rect. 10 20
67 140.50 temperature 30.0 270 < th dose independent rect. 5 7
68 140.54 temperature 15.0 10 > th dose dependent rect. 12 7
80 140.89 atmosphere 995.0 270 > th dose dependent rect. 22 8
82 140.93 temperature 30.0 270 < th dose independent rect. 6 5
91 141.15 humidity 50.0 270 > th dose dependent rect. 7 2
92 141.16 temperature 30.0 270 < th dose independent rect. 7 2
104 141.41 wind 9.0 90 < th dose independent rect. 12 19
123 141.70 wind 9.0 270 < th dose independent rect. 7 2
124 141.70 temperature 10.0 270 > th dose independent rect. 7 2
126 141.70 humidity 50.0 270 > th dose independent rect. 7 2
127 141.70 atmosphere 995.0 270 > th dose independent rect. 7 2
128 141.70 atmosphere 1015.0 270 < th dose independent rect. 7 2
130 141.70 wind 7.0 270 < th dose independent rect. 1 14
131 141.70 temperature 10.0 270 > th dose independent rect. 9 22
132 141.74 wind 9.0 10 < th dose independent rect. 12 19
146 141.77 precipitation 0.1 270 < th dose independent rect. 7 2
147 141.77 precipitation 0.1 270 < th dose dependent rect. 7 2
148 141.78 temperature 15.0 270 > th dose independent rect. 18 16
150 141.80 atmosphere 1000.0 270 > th dose independent rect. 22 8
151 141.80 radiation 40.0 270 < th dose independent rect. 6 17
155 141.86 temperature 25.0 10 > th dose independent rect. 12 7
157 141.86 humidity 50.0 270 > th dose dependent rect. 6 5
167 141.96 radiation 40.0 270 < th dose independent rect. 7 2
173 142.03 precipitation 0.1 90 < th dose independent rect. 7 5
175 142.03 precipitation 0.1 90 < th dose dependent rect. 7 5
176 142.04 temperature 10.0 90 > th dose independent rect. 7 5
177 142.04 atmosphere 995.0 90 > th dose independent rect. 7 5
178 142.04 atmosphere 1015.0 90 < th dose independent rect. 7 5
179 142.04 temperature 30.0 90 < th dose independent rect. 7 16
180 142.04 temperature 10.0 90 > th dose independent rect. 12 19
181 142.05 radiation 10.0 30 > th dose independent sin 6 NA
184 142.08 wind 1.0 10 > th dose independent rect. 7 5
185 142.12 precipitation 0.1 270 < th dose independent rect. 6 15
186 142.12 precipitation 0.1 270 < th dose dependent rect. 6 15
192 142.18 radiation 30.0 90 < th dose dependent rect. 23 9
193 142.20 precipitation 0.1 270 < th dose independent rect. 18 16
194 142.20 precipitation 0.1 270 < th dose dependent rect. 18 16
197 142.22 radiation 40.0 270 < th dose independent rect. 6 5
199 142.24 precipitation 0.1 10 < th dose independent rect. 7 5
200 142.24 precipitation 0.1 10 < th dose dependent rect. 7 5
220 142.33 temperature 10.0 10 > th dose independent rect. 7 5
222 142.33 atmosphere 995.0 10 > th dose independent rect. 7 5
223 142.33 atmosphere 1015.0 10 < th dose independent rect. 7 5
225 142.33 temperature 10.0 10 > th dose independent rect. 12 19
245 142.45 temperature 10.0 90 > th dose dependent rect. 19 16
248 142.50 temperature 10.0 1440 > th dose independent rect. 8 5
251 142.50 atmosphere 995.0 1440 > th dose independent rect. 8 5
252 142.50 temperature 10.0 1440 > th dose independent rect. 13 19
258 142.51 temperature 10.0 270 > th dose independent rect. 10 20
262 142.54 wind 9.0 90 < th dose independent rect. 7 5
263 142.54 atmosphere 1015.0 270 < th dose independent rect. 6 16
266 142.57 humidity 50.0 270 > th dose independent rect. 6 4
275 142.60 humidity 60.0 90 > th dose dependent rect. 23 9
279 142.66 radiation 10.0 270 < th dose dependent rect. 22 9
280 142.67 humidity 70.0 270 > th dose independent rect. 6 5
293 142.77 temperature 15.0 270 > th dose independent rect. 10 8
295 142.78 radiation 1.0 270 > th dose independent rect. 7 2
331 142.98 temperature 15.0 30 > th dose independent rect. 19 17
336 143.04 humidity 80.0 30 < th dose independent rect. 7 5
339 143.06 radiation 20.0 90 < th dose independent rect. 23 9
352 143.10 wind 7.0 30 < th dose independent rect. 12 7
366 143.17 temperature 30.0 270 < th dose independent rect. 18 16
370 143.17 temperature 30.0 270 < th dose dependent rect. 22 8
389 143.19 wind 9.0 270 < th dose independent rect. 22 8
390 143.19 temperature 10.0 270 > th dose independent rect. 22 8
391 143.19 temperature 30.0 270 < th dose independent rect. 22 8
392 143.19 humidity 50.0 270 > th dose independent rect. 22 8
399 143.19 temperature 10.0 270 > th dose independent rect. 6 16
418 143.28 radiation 1.0 270 < th dose dependent sin 7 NA
422 143.30 atmosphere 995.0 270 > th dose independent rect. 18 16
441 143.33 wind 9.0 270 < th dose independent rect. 18 16
444 143.34 humidity 50.0 270 > th dose independent rect. 18 16
458 143.39 wind 9.0 270 < th dose dependent rect. 10 8
465 143.41 temperature 10.0 270 > th dose dependent rect. 1 15
466 143.42 temperature 25.0 90 < th dose independent rect. 23 10
491 143.52 precipitation 0.1 10 < th dose independent rect. 12 19
493 143.52 precipitation 0.1 10 < th dose dependent rect. 12 19
495 143.54 radiation 40.0 270 < th dose independent rect. 18 16
498 143.55 temperature 25.0 90 > th dose independent rect. 19 15
547 143.70 temperature 30.0 90 < th dose independent rect. 7 20
599 143.77 radiation 1.0 270 < th dose independent sin 8 NA
602 143.77 radiation 1.0 10 > th dose dependent rect. 7 5
603 143.78 precipitation 0.1 270 < th dose independent rect. 10 8
604 143.78 precipitation 0.1 270 < th dose dependent rect. 10 8
618 143.82 atmosphere 1015.0 30 < th dose dependent rect. 12 7
633 143.88 atmosphere 1015.0 270 < th dose independent rect. 18 16
636 143.90 temperature 10.0 10 > th dose dependent rect. 12 19
638 143.91 atmosphere 995.0 90 > th dose independent rect. 7 16
640 143.92 precipitation 0.1 270 < th dose independent rect. 22 8
644 143.92 precipitation 0.1 270 < th dose dependent rect. 22 8
647 143.93 temperature 30.0 90 < th dose independent rect. 7 18
684 144.05 temperature 15.0 270 > th dose independent rect. 15 10
704 144.10 temperature 25.0 30 > th dose dependent rect. 11 20
714 144.13 humidity 90.0 270 < th dose independent rect. 10 7
735 144.19 atmosphere 995.0 90 > th dose independent rect. 12 19
743 144.21 wind 9.0 270 < th dose dependent rect. 7 2
747 144.22 temperature 10.0 90 > th dose independent rect. 12 7
754 144.22 humidity 50.0 30 > th dose independent rect. 12 19
764 144.24 radiation 40.0 270 < th dose dependent rect. 6 17
793 144.30 radiation 40.0 270 < th dose dependent rect. 7 2
823 144.36 humidity 70.0 10 > th dose independent rect. 23 9
845 144.41 temperature 30.0 10 < th dose independent rect. 8 19
869 144.46 temperature 10.0 10 > th dose dependent rect. 7 5
873 144.47 atmosphere 1000.0 10 > th dose independent rect. 23 9
881 144.49 radiation 1.0 270 < th dose dependent rect. 22 19
892 144.51 precipitation 0.1 270 < th dose independent rect. 10 20
893 144.51 precipitation 0.1 270 < th dose dependent rect. 10 20
895 144.52 wind 9.0 270 < th dose independent rect. 6 16
898 144.52 temperature 30.0 270 < th dose dependent rect. 6 9
919 144.57 precipitation 0.1 30 < th dose independent rect. 12 7
920 144.57 precipitation 0.1 30 < th dose dependent rect. 12 7
923 144.58 atmosphere 1000.0 10 > th dose independent rect. 1 7
933 144.62 temperature 30.0 10 < th dose independent rect. 7 7
959 144.64 humidity 50.0 270 > th dose independent rect. 11 19
965 144.66 wind 9.0 30 < th dose independent rect. 19 17
976 144.68 radiation 1.0 270 < th dose independent rect. 22 17
994 144.71 radiation 30.0 270 < th dose independent rect. 15 10