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Os11g0526200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 13.9 (0.0171) R2 : 0.617
β1 : -1.05 (0.0624) R2dD : 0.248 R2D : 0.14
β2 : 0.841 (0.0442) R2dC : 0.306 R2C : 0.246
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.482 (0.0364) R2dN8 : 0.198 R2N8 : 0.0686
σ : 0.32
deviance : 46.79
__
_____
C
peak time of C : 7.03
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
41.51 0.303 13.9 -1.11 0.917 0.426 0.0351 0.177 -0.514 5.22 10.46 94 -- --
41.62 0.303 13.9 -1.09 0.844 0.373 -0.031 -- -0.48 5.33 10.93 95 -- --
41.5 0.3 13.9 -1.11 0.924 0.438 -- 0.175 -0.517 5.2 10.89 95 -- --
41.62 0.302 13.9 -1.09 0.844 0.372 -- -- -0.48 5.33 10.93 95 -- --
77.38 0.412 13.9 -1.06 -- 0.254 -- 0.104 -0.461 -- 10.89 95 -- --
46.76 0.321 13.9 -1.05 0.84 -- 0.102 -- -0.482 7.04 -- -- -- --
46.79 0.32 13.9 -1.05 0.841 -- -- -- -0.482 7.03 -- -- -- --
77.45 0.412 13.9 -1.06 -- 0.256 -- -- -0.462 -- 10.89 95 -- --
71.63 0.394 13.9 -- 0.846 0.398 -- -- -0.399 5.6 8.872 100 -- --
83.97 0.428 13.9 -1.04 -- -- -- -- -0.467 -- -- -- -- --
75.95 0.408 13.9 -- 0.829 -- -- -- -0.365 7.11 -- -- -- --
104.11 0.477 13.9 -- -- 0.28 -- -- -0.333 -- 9.85 33 -- --
112.24 0.494 13.9 -- -- -- -- -- -0.352 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 38.39 atmosphere 1000 30 > th dose independent rect. 5 16
10 39.57 atmosphere 1000 10 > th dose independent rect. 1 20
15 39.72 atmosphere 1000 10 > th dose independent rect. 12 20
20 39.95 atmosphere 1000 270 > th dose independent rect. 2 17
24 40.02 atmosphere 1000 10 > th dose independent rect. 12 10
28 40.07 radiation 20 90 < th dose dependent rect. 5 14
37 40.17 radiation 1 1440 > th dose independent rect. 10 3
46 40.29 radiation 10 90 < th dose independent rect. 5 14
52 40.35 radiation 20 30 < th dose dependent rect. 5 16
57 40.42 radiation 1 1440 < th dose independent rect. 11 1
58 40.42 radiation 1 1440 < th dose dependent rect. 11 1
59 40.43 radiation 10 90 > th dose independent sin 1 NA
72 40.49 atmosphere 1000 270 > th dose independent rect. 11 9
73 40.50 radiation 10 90 < th dose independent rect. 5 16
100 40.66 humidity 80 10 < th dose independent rect. 8 8
109 40.73 temperature 15 10 > th dose dependent rect. 8 8
113 40.75 radiation 20 30 < th dose dependent sin 0 NA
118 40.78 radiation 10 90 > th dose independent rect. 8 8
152 40.88 atmosphere 995 270 > th dose dependent rect. 11 8
171 40.95 atmosphere 995 270 > th dose independent rect. 14 16
173 40.96 radiation 10 90 > th dose independent rect. 17 23
180 40.99 atmosphere 1000 10 > th dose independent rect. 16 16
194 41.01 radiation 1 1440 < th dose dependent rect. 8 9
203 41.03 radiation 30 90 < th dose dependent rect. 12 21
206 41.04 atmosphere 1015 10 < th dose dependent rect. 8 8
215 41.06 radiation 10 90 < th dose independent sin 0 NA
235 41.07 radiation 10 90 > th dose independent rect. 8 23
241 41.08 radiation 40 10 < th dose dependent rect. 12 20
247 41.09 radiation 40 90 < th dose dependent rect. 11 23
248 41.10 humidity 60 10 > th dose dependent sin 2 NA
264 41.13 temperature 25 270 > th dose dependent rect. 19 19
265 41.14 wind 5 270 < th dose independent rect. 7 7
280 41.14 radiation 10 90 > th dose independent rect. 15 23
282 41.14 temperature 25 270 > th dose dependent rect. 20 17
302 41.17 humidity 80 30 < th dose independent rect. 8 6
308 41.18 radiation 40 270 < th dose independent rect. 11 20
312 41.19 radiation 10 270 > th dose independent sin 5 NA
340 41.22 radiation 20 270 < th dose dependent sin 5 NA
347 41.25 radiation 10 30 > th dose independent rect. 8 6
357 41.25 wind 7 270 < th dose independent rect. 7 18
365 41.25 temperature 10 270 > th dose dependent rect. 6 8
369 41.26 radiation 10 90 < th dose independent rect. 1 20
393 41.30 atmosphere 1015 270 < th dose dependent rect. 7 7
400 41.31 atmosphere 995 10 > th dose dependent rect. 12 9
407 41.32 temperature 10 270 > th dose dependent rect. 19 19
409 41.32 radiation 20 30 < th dose dependent rect. 5 23
421 41.33 atmosphere 1000 10 < th dose independent rect. 9 17
426 41.33 radiation 10 10 > th dose independent rect. 15 23
444 41.35 wind 1 14400 < th dose dependent rect. 2 1
485 41.38 radiation 30 90 < th dose dependent rect. 1 20
488 41.39 wind 9 270 < th dose dependent rect. 7 7
490 41.39 humidity 60 30 > th dose dependent rect. 5 13
492 41.39 radiation 40 270 < th dose dependent rect. 1 17
500 41.40 radiation 20 270 < th dose dependent rect. 1 13
501 41.40 radiation 40 10 < th dose dependent rect. 12 22
510 41.41 temperature 15 30 > th dose dependent rect. 8 6
513 41.41 radiation 40 90 < th dose dependent rect. 23 23
528 41.44 atmosphere 1000 10 < th dose independent sin 21 NA
532 41.44 radiation 20 90 < th dose independent rect. 12 20
533 41.44 radiation 10 90 < th dose independent rect. 24 23
536 41.45 radiation 1 1440 < th dose independent rect. 13 1
541 41.45 radiation 10 90 < th dose independent rect. 1 18
548 41.45 radiation 1 1440 < th dose dependent rect. 13 1
558 41.46 radiation 1 90 > th dose dependent rect. 15 23
559 41.47 temperature 30 270 > th dose independent rect. 8 6
586 41.48 temperature 25 270 > th dose dependent sin 8 NA
587 41.48 humidity 90 10 < th dose dependent rect. 8 8
599 41.49 atmosphere 1015 10 < th dose dependent rect. 8 17
656 41.52 atmosphere 995 30 > th dose dependent rect. 5 16
658 41.52 radiation 40 270 < th dose dependent rect. 23 20
660 41.52 atmosphere 1005 10 < th dose dependent rect. 20 22
662 41.53 radiation 10 90 > th dose independent no NA NA
691 41.53 wind 5 270 < th dose independent rect. 19 19
753 41.54 wind 7 270 < th dose independent rect. 6 21
760 41.54 radiation 1 90 > th dose dependent rect. 7 10
764 41.55 radiation 1 1440 < th dose independent rect. 11 3
780 41.55 radiation 1 1440 < th dose dependent rect. 11 3
813 41.57 atmosphere 1005 10 < th dose dependent rect. 8 23
830 41.59 humidity 80 30 > th dose independent rect. 5 13
841 41.59 radiation 40 90 < th dose dependent rect. 15 17
850 41.60 wind 7 30 < th dose independent rect. 8 21
873 41.61 humidity 90 270 < th dose independent rect. 20 18
892 41.61 temperature 10 270 > th dose dependent rect. 20 17
927 41.62 humidity 90 10 < th dose dependent rect. 21 19
945 41.64 atmosphere 1000 10 > th dose independent sin 20 NA