Os11g0523800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Transcriptional factor B3 family protein.
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Os11g0523800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Transcriptional factor B3 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 40.97 | 0.301 | 11.4 | 0.482 | 1.3 | 0.715 | 0.429 | 0.778 | 0.316 | 4.97 | 10.61 | 5620 | -- | -- |
| 41.47 | 0.3 | 11.4 | 0.309 | 1.31 | 0.664 | 0.454 | -- | 0.256 | 4.94 | 12.6 | 5763 | -- | -- |
| 41.44 | 0.3 | 11.4 | 0.487 | 1.31 | 0.717 | -- | 0.813 | 0.315 | 4.98 | 10.35 | 5636 | -- | -- |
| 41.98 | 0.302 | 11.4 | 0.307 | 1.31 | 0.673 | -- | -- | 0.262 | 4.95 | 11.81 | 5763 | -- | -- |
| 129.74 | 0.531 | 11.4 | 0.647 | -- | 0.772 | -- | 1.16 | 0.361 | -- | 2.298 | 2715 | -- | -- |
| 48.9 | 0.328 | 11.4 | 0.633 | 1.33 | -- | 0.464 | -- | 0.411 | 4.91 | -- | -- | -- | -- |
| 49.45 | 0.329 | 11.4 | 0.632 | 1.33 | -- | -- | -- | 0.409 | 4.92 | -- | -- | -- | -- |
| 131.12 | 0.533 | 11.4 | 0.374 | -- | 0.757 | -- | -- | 0.286 | -- | -165.1 | 2714 | -- | -- |
| 41.59 | 0.3 | 11.4 | -- | 1.32 | 0.72 | -- | -- | 0.13 | 4.94 | 12.86 | 36076 | -- | -- |
| 142.99 | 0.559 | 11.4 | 0.681 | -- | -- | -- | -- | 0.443 | -- | -- | -- | -- | -- |
| 59.97 | 0.362 | 11.4 | -- | 1.34 | -- | -- | -- | 0.339 | 4.9 | -- | -- | -- | -- |
| 132.98 | 0.537 | 11.4 | -- | -- | 0.722 | -- | -- | 0.169 | -- | 17.29 | 35856 | -- | -- |
| 155.22 | 0.582 | 11.4 | -- | -- | -- | -- | -- | 0.368 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 39.12 | wind | 9.0 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 2 | 39.63 | wind | 9.0 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 3 | 39.63 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 7 | 40.36 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 22 | 2 |
| 8 | 40.36 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 22 | 2 |
| 9 | 40.41 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 5 | 1 |
| 10 | 40.41 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 5 | 1 |
| 13 | 40.42 | temperature | 10.0 | 4320 | > th | dose dependent | rect. | 5 | 1 |
| 21 | 40.47 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 22 | 2 |
| 23 | 40.47 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 22 | 2 |
| 39 | 40.57 | radiation | 1.0 | 720 | > th | dose independent | rect. | 10 | 20 |
| 69 | 40.70 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 89 | 40.73 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 101 | 40.77 | atmosphere | 1010.0 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 102 | 40.77 | radiation | 20.0 | 720 | < th | dose dependent | rect. | 16 | 1 |
| 112 | 40.79 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 22 | 1 |
| 124 | 40.81 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 2 | 3 |
| 148 | 40.84 | temperature | 20.0 | 14400 | < th | dose dependent | rect. | 4 | 9 |
| 191 | 40.90 | radiation | 20.0 | 4320 | > th | dose independent | rect. | 16 | 15 |
| 199 | 40.91 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 13 | 9 |
| 205 | 40.92 | wind | 9.0 | 43200 | > th | dose independent | rect. | 15 | 4 |
| 223 | 40.94 | wind | 1.0 | 14400 | > th | dose independent | rect. | 10 | 2 |
| 268 | 40.98 | wind | 1.0 | 14400 | < th | dose independent | rect. | 10 | 2 |
| 291 | 41.00 | temperature | 20.0 | 14400 | < th | dose dependent | sin | 3 | NA |
| 301 | 41.01 | atmosphere | 1010.0 | 4320 | < th | dose independent | rect. | 8 | 1 |
| 339 | 41.03 | temperature | 10.0 | 4320 | > th | dose dependent | sin | 9 | NA |
| 340 | 41.03 | temperature | 30.0 | 4320 | < th | dose dependent | sin | 9 | NA |
| 359 | 41.04 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 10 | 2 |
| 410 | 41.07 | temperature | 30.0 | 43200 | > th | dose independent | rect. | 14 | 1 |
| 413 | 41.07 | radiation | 1.0 | 720 | > th | dose independent | rect. | 10 | 9 |
| 439 | 41.08 | temperature | 25.0 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 451 | 41.09 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 14 | 1 |
| 452 | 41.09 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 456 | 41.09 | temperature | 20.0 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 612 | 41.15 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 17 | 6 |
| 625 | 41.16 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 4 | 1 |
| 627 | 41.16 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 4 | 1 |
| 651 | 41.17 | temperature | 25.0 | 43200 | < th | dose independent | sin | 14 | NA |
| 672 | 41.18 | temperature | 25.0 | 43200 | > th | dose independent | sin | 14 | NA |
| 683 | 41.18 | radiation | 30.0 | 1440 | < th | dose independent | rect. | 16 | 16 |
| 710 | 41.19 | radiation | 20.0 | 720 | < th | dose independent | rect. | 15 | 2 |
| 727 | 41.19 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 15 | 3 |
| 941 | 41.23 | temperature | 30.0 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 978 | 41.24 | temperature | 20.0 | 43200 | > th | dose dependent | sin | 13 | NA |
| 983 | 41.24 | temperature | 20.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |