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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os11g0518600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.48 (0.0487) R2 : 0.605
β1 : 1.83 (0.199) R2dD : 0.127 R2D : 0.0576
β2 : -- (--) R2dC : -- R2C : --
β3 : 3.58 (0.182) R2dE : 0.381 R2E : 0.48
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : 9.04 (1) R2dD*E : 0.085 R2D*E : 0.0352
γ1 : 0.342 (0.107) R2dN8 : 0.0154 R2N8 : 0.0146
σ : 0.876
deviance : 353.94
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_____
C
peak time of C : --
E
wheather : temperature
threshold : 22.78
memory length : 12
response mode : > th
dose dependency : dose dependent
G
type of G : sin
peak or start time of G : 21.7
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = sin)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
329.5 0.853 3.46 1.78 0.939 3.21 2.07 6.06 0.444 12 25.06 12 23.8 --
340.69 0.86 3.51 1.3 0.947 3.65 2.77 -- 0.314 12.1 25.21 18 0.0106 --
339.72 0.858 3.43 2.18 0.801 2.89 -- 9.29 0.496 11.8 24.15 13 22.8 --
373.1 0.9 3.5 1.39 0.878 3.78 -- -- 0.323 11.8 25.23 18 23.8 --
353.94 0.876 3.48 1.83 -- 3.58 -- 9.04 0.342 -- 22.78 12 21.7 --
507.9 1.06 3.42 1.61 2 -- 3.41 -- 0.618 11.7 -- -- -- --
557.92 1.11 3.41 1.75 1.99 -- -- -- 0.631 11.5 -- -- -- --
401.02 0.933 3.56 1.25 -- 4.29 -- -- 0.172 -- 24.5 18 22.7 --
422.58 0.957 3.55 -- 0.76 4.02 -- -- 0.144 11.7 25.2 18 23.6 --
806.38 1.33 3.46 1.69 -- -- -- -- 0.609 -- -- -- -- --
638.19 1.18 3.46 -- 1.97 -- -- -- 0.437 11.5 -- -- -- --
442.69 0.98 3.6 -- -- 4.46 -- -- -0.00113 -- 24.43 20 22.7 --
881.81 1.39 3.5 -- -- -- -- -- 0.421 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 329.92 temperature 20 10 > th dose dependent rect. 7 7
2 330.73 temperature 25 10 > th dose dependent sin 6 NA
7 335.79 temperature 20 90 > th dose dependent rect. 6 9
9 338.25 temperature 15 270 > th dose dependent rect. 6 5
22 343.76 temperature 30 90 < th dose dependent rect. 3 14
38 348.00 temperature 25 90 > th dose dependent rect. 23 12
44 348.51 temperature 25 90 > th dose independent rect. 7 4
47 349.04 temperature 10 10 > th dose dependent sin 2 NA
60 351.03 radiation 30 90 < th dose dependent sin 5 NA
74 353.00 temperature 30 10 < th dose dependent sin 2 NA
95 356.72 radiation 1 90 > th dose dependent sin 6 NA
107 358.72 temperature 25 10 > th dose independent rect. 7 7
122 360.17 radiation 10 90 > th dose independent sin 4 NA
166 363.69 temperature 10 10 > th dose dependent rect. 8 16
174 364.54 temperature 10 10 > th dose dependent rect. 8 18
177 365.14 radiation 1 90 > th dose dependent rect. 7 4
183 365.77 radiation 20 90 > th dose independent rect. 7 4
244 367.72 radiation 20 90 > th dose independent sin 8 NA
256 368.24 temperature 10 90 > th dose dependent rect. 7 18
261 368.34 temperature 25 10 > th dose dependent rect. 23 15
289 369.75 radiation 10 90 < th dose independent sin 4 NA
305 370.46 radiation 20 90 < th dose independent sin 7 NA
348 372.52 temperature 25 10 > th dose independent rect. 7 5
381 373.97 radiation 10 90 > th dose independent rect. 7 8
392 374.51 temperature 25 90 < th dose independent rect. 3 14
414 375.71 radiation 30 90 < th dose dependent rect. 3 14
438 376.67 radiation 20 90 < th dose dependent rect. 3 12
454 377.21 radiation 20 270 < th dose dependent rect. 24 14
516 379.07 radiation 20 10 < th dose dependent sin 2 NA
592 380.88 temperature 25 90 > th dose independent sin 4 NA
614 381.66 radiation 10 90 < th dose independent rect. 3 12
675 383.25 radiation 40 10 < th dose dependent rect. 12 20
688 383.48 temperature 25 90 < th dose independent rect. 3 8
695 383.68 temperature 25 90 < th dose independent sin 4 NA
698 383.74 radiation 10 270 < th dose independent rect. 24 14
726 384.49 radiation 10 90 < th dose independent rect. 3 14
797 386.50 radiation 40 90 > th dose independent rect. 8 3
885 387.43 radiation 40 90 < th dose dependent rect. 11 23
891 387.61 radiation 40 90 < th dose dependent rect. 9 23
904 387.87 radiation 1 90 > th dose dependent rect. 15 23
979 389.17 radiation 40 90 < th dose dependent rect. 11 21