Os11g0517400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os11g0517400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 315.53 | 0.835 | 3.72 | 1.32 | 0.468 | -0.98 | 0.0421 | -3.27 | 2.23 | 5.19 | 84.97 | 5506 | -- | -- |
| 329.7 | 0.846 | 3.73 | 1.51 | 0.446 | -1.16 | 0.0504 | -- | 2.22 | 5.34 | 80 | 5401 | -- | -- |
| 315.53 | 0.827 | 3.72 | 1.32 | 0.47 | -0.976 | -- | -3.26 | 2.23 | 5.21 | 85 | 5510 | -- | -- |
| 329.54 | 0.845 | 3.73 | 1.51 | 0.439 | -1.21 | -- | -- | 2.22 | 5 | 80.01 | 5388 | -- | -- |
| 325.15 | 0.84 | 3.72 | 1.35 | -- | -1.06 | -- | -3.17 | 2.25 | -- | 85.57 | 5002 | -- | -- |
| 348.85 | 0.876 | 3.76 | 1.52 | 0.443 | -- | -0.183 | -- | 2.12 | 5.97 | -- | -- | -- | -- |
| 348.93 | 0.875 | 3.75 | 1.52 | 0.442 | -- | -- | -- | 2.12 | 5.91 | -- | -- | -- | -- |
| 337.85 | 0.856 | 3.73 | 1.53 | -- | -1.25 | -- | -- | 2.28 | -- | 82.42 | 5041 | -- | -- |
| 387.08 | 0.916 | 3.72 | -- | 0.458 | -1.29 | -- | -- | 2.24 | 5.13 | 94 | 5410 | -- | -- |
| 359.05 | 0.885 | 3.76 | 1.53 | -- | -- | -- | -- | 2.13 | -- | -- | -- | -- | -- |
| 409.83 | 0.947 | 3.79 | -- | 0.465 | -- | -- | -- | 1.95 | 5.75 | -- | -- | -- | -- |
| 395.92 | 0.927 | 3.73 | -- | -- | -1.38 | -- | -- | 2.27 | -- | 94 | 5014 | -- | -- |
| 421.07 | 0.958 | 3.8 | -- | -- | -- | -- | -- | 1.96 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 312.80 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 8 | 2 |
| 2 | 313.66 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 8 | 2 |
| 4 | 315.45 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 3 |
| 5 | 315.45 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 3 |
| 6 | 315.54 | humidity | 70.0 | 4320 | > th | dose dependent | rect. | 7 | 3 |
| 7 | 315.59 | humidity | 60.0 | 4320 | > th | dose dependent | rect. | 5 | 5 |
| 17 | 315.79 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 4 | 7 |
| 21 | 315.92 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 3 |
| 29 | 316.19 | humidity | 80.0 | 4320 | > th | dose independent | rect. | 4 | 7 |
| 32 | 316.26 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 24 | 18 |
| 33 | 316.26 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 24 | 18 |
| 37 | 316.32 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 24 | 18 |
| 44 | 316.38 | humidity | 90.0 | 4320 | < th | dose dependent | rect. | 4 | 6 |
| 49 | 316.44 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 24 | 18 |
| 62 | 316.63 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 3 | 16 |
| 64 | 316.63 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 3 | 16 |
| 66 | 316.65 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 3 |
| 121 | 317.15 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 10 | 1 |
| 132 | 317.32 | humidity | 90.0 | 4320 | < th | dose dependent | rect. | 9 | 1 |
| 198 | 318.03 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 5 |
| 201 | 318.03 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 5 |
| 203 | 318.04 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 1 | NA |
| 205 | 318.04 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 1 | NA |
| 214 | 318.09 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 1 | NA |
| 243 | 318.23 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 5 |
| 286 | 318.44 | wind | 3.0 | 14400 | < th | dose independent | rect. | 3 | 4 |
| 287 | 318.45 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 2 | NA |
| 289 | 318.46 | wind | 3.0 | 14400 | > th | dose independent | rect. | 4 | 2 |
| 298 | 318.54 | wind | 3.0 | 14400 | > th | dose independent | rect. | 3 | 4 |
| 369 | 318.96 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 3 | 5 |
| 428 | 319.19 | humidity | 80.0 | 4320 | > th | dose independent | rect. | 23 | 12 |
| 546 | 319.76 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 3 | 5 |
| 575 | 319.91 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 589 | 319.96 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 24 | 8 |
| 609 | 320.03 | wind | 7.0 | 14400 | < th | dose dependent | rect. | 5 | 1 |
| 625 | 320.09 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 8 |
| 655 | 320.22 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 6 |
| 659 | 320.23 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 13 |
| 670 | 320.27 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 729 | 320.49 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 8 | 9 |
| 731 | 320.51 | wind | 3.0 | 14400 | > th | dose independent | rect. | 24 | 8 |
| 785 | 320.72 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 21 |
| 796 | 320.78 | humidity | 90.0 | 4320 | < th | dose dependent | sin | 5 | NA |
| 894 | 321.11 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 19 | 16 |
| 897 | 321.12 | wind | 1.0 | 14400 | > th | dose independent | rect. | 4 | 9 |
| 964 | 321.31 | humidity | 50.0 | 4320 | > th | dose dependent | sin | 4 | NA |
| 967 | 321.32 | precipitation | 0.1 | 14400 | > th | dose dependent | no | NA | NA |
| 995 | 321.40 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 9 | 23 |