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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os11g0516800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 4.06 (0.034) R2 : 0.375
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 1.18 (0.0716) R2dN8 : 0.484 R2N8 : 0.375
σ : 0.64
deviance : 188.12
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
167.02 0.607 4.07 -0.501 0.239 0.405 -0.901 -2.76 1.04 7.51 41.18 4522 -- --
176.85 0.619 4.06 -0.148 0.26 0.411 -0.939 -- 1.12 7.69 46.95 4639 -- --
169.27 0.606 4.07 -0.523 0.241 0.412 -- -2.81 1.04 7.46 41.23 4522 -- --
179.35 0.624 4.06 -0.153 0.263 0.453 -- -- 1.14 7.78 46.95 4522 -- --
172.25 0.611 4.08 -0.529 -- 0.428 -- -2.84 1.04 -- 41.14 4505 -- --
180.26 0.629 4.06 -0.207 0.251 -- -0.963 -- 1.15 8.29 -- -- -- --
183.14 0.634 4.06 -0.236 0.253 -- -- -- 1.15 8.29 -- -- -- --
182.5 0.629 4.06 -0.157 -- 0.496 -- -- 1.14 -- 46.95 4518 -- --
179.25 0.624 4.06 -- 0.248 0.635 -- -- 1.12 7.9 49.32 5951 -- --
186.68 0.638 4.06 -0.234 -- -- -- -- 1.16 -- -- -- -- --
184.6 0.636 4.05 -- 0.252 -- -- -- 1.18 8.35 -- -- -- --
180.45 0.626 4.03 -- -- 0.59 -- -- 1.22 -- 59.99 5818 -- --
188.12 0.64 4.06 -- -- -- -- -- 1.18 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 165.61 atmosphere 1005 90 > th dose dependent rect. 9 2
2 166.05 radiation 10 43200 < th dose dependent rect. 15 1
3 166.33 humidity 80 4320 < th dose independent rect. 5 1
5 166.64 radiation 30 14400 > th dose independent rect. 15 18
6 166.78 radiation 40 14400 > th dose independent rect. 9 1
7 166.80 radiation 20 14400 > th dose independent rect. 16 16
8 166.88 humidity 80 4320 < th dose dependent rect. 17 13
9 166.91 atmosphere 1000 720 > th dose dependent rect. 23 3
13 167.01 humidity 90 4320 < th dose dependent rect. 4 1
16 167.09 radiation 40 4320 > th dose independent rect. 14 20
24 167.36 atmosphere 1010 30 < th dose independent rect. 11 23
26 167.39 atmosphere 1005 270 > th dose dependent rect. 22 13
28 167.43 wind 1 14400 < th dose independent rect. 18 1
31 167.50 wind 1 14400 > th dose independent rect. 16 3
32 167.51 radiation 40 4320 > th dose independent sin 11 NA
33 167.52 radiation 40 4320 > th dose independent rect. 7 3
50 167.54 atmosphere 1005 270 > th dose dependent rect. 6 5
72 167.59 wind 1 14400 > th dose independent rect. 18 1
74 167.67 radiation 20 14400 > th dose independent rect. 16 1
75 167.67 humidity 80 4320 < th dose independent rect. 18 13
76 167.68 humidity 90 4320 < th dose dependent rect. 19 1
101 167.84 humidity 50 4320 > th dose dependent rect. 19 1
125 168.06 radiation 10 43200 > th dose independent rect. 13 3
126 168.06 atmosphere 995 270 > th dose dependent rect. 22 13
130 168.09 humidity 80 4320 > th dose independent rect. 5 1
145 168.19 humidity 80 4320 < th dose independent sin 12 NA
146 168.19 humidity 80 4320 > th dose independent rect. 16 15
150 168.22 radiation 10 43200 > th dose independent rect. 14 1
174 168.35 radiation 40 4320 > th dose dependent rect. 9 1
181 168.38 atmosphere 1005 270 > th dose dependent rect. 6 7
199 168.47 radiation 10 43200 > th dose independent rect. 13 18
208 168.49 wind 1 14400 < th dose dependent rect. 18 1
212 168.56 humidity 70 4320 > th dose independent rect. 17 3
215 168.56 atmosphere 1005 10 > th dose dependent rect. 9 4
217 168.58 wind 9 1440 < th dose independent rect. 4 6
276 168.63 atmosphere 1005 90 > th dose dependent rect. 9 6
280 168.64 wind 1 14400 > th dose independent rect. 13 6
300 168.65 atmosphere 1005 10 > th dose dependent rect. 9 7
317 168.71 radiation 40 14400 > th dose independent rect. 11 1
318 168.71 radiation 40 4320 < th dose independent rect. 6 5
338 168.72 radiation 40 4320 < th dose independent rect. 19 16
353 168.74 humidity 70 4320 > th dose independent rect. 16 11
419 168.80 radiation 20 90 > th dose independent rect. 10 1
438 168.82 radiation 40 4320 > th dose dependent sin 10 NA
444 168.84 humidity 80 4320 > th dose independent sin 12 NA
496 168.94 humidity 80 4320 < th dose dependent sin 12 NA
499 168.95 atmosphere 1005 270 > th dose dependent sin 6 NA
522 168.97 temperature 15 1440 > th dose independent rect. 11 1
523 168.98 humidity 90 1440 < th dose independent rect. 11 1
577 169.03 radiation 20 14400 > th dose independent sin 12 NA
612 169.09 atmosphere 1005 720 > th dose dependent sin 10 NA
615 169.10 radiation 40 4320 < th dose independent sin 9 NA
623 169.11 humidity 50 10 > th dose independent rect. 11 23
645 169.17 wind 1 14400 < th dose independent rect. 13 6
648 169.18 wind 1 14400 < th dose independent rect. 16 3
651 169.18 atmosphere 1005 720 > th dose dependent rect. 1 1
714 169.25 humidity 70 4320 < th dose independent rect. 16 4
721 169.26 humidity 60 4320 < th dose independent rect. 11 1
795 169.29 radiation 1 90 > th dose dependent rect. 10 1
831 169.33 atmosphere 1005 90 > th dose independent rect. 9 2
844 169.33 radiation 30 10 < th dose dependent rect. 10 1
891 169.37 atmosphere 1015 720 < th dose dependent rect. 20 11
920 169.40 radiation 40 4320 > th dose independent no NA NA