Os11g0514800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os11g0514800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 82.15 | 0.426 | 16.3 | 27.3 | 0.202 | 1970 | 0.0585 | 4090 | 0.399 | 21.2 | 3 | 1 | 11 | 1 |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 117.11 | 0.507 | 3.1 | -0.156 | 0.17 | -- | 0.308 | -- | 0.371 | 21.1 | -- | -- | -- | -- |
| 117.4 | 0.507 | 3.1 | -0.165 | 0.173 | -- | -- | -- | 0.371 | 20.5 | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 119.08 | 0.51 | 3.1 | -0.166 | -- | -- | -- | -- | 0.369 | -- | -- | -- | -- | -- |
| 118.12 | 0.508 | 3.1 | -- | 0.174 | -- | -- | -- | 0.389 | 20.4 | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 119.81 | 0.511 | 3.09 | -- | -- | -- | -- | -- | 0.388 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 82.15 | temperature | 20.0 | 10 | < th | dose independent | rect. | 11 | 1 |
| 7 | 82.15 | humidity | 90.0 | 90 | > th | dose independent | rect. | 10 | 1 |
| 9 | 82.15 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 10 | 1 |
| 24 | 82.15 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 11 | 1 |
| 30 | 82.15 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 10 | 1 |
| 32 | 82.15 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 10 | 1 |
| 125 | 100.96 | temperature | 15.0 | 720 | < th | dose dependent | rect. | 24 | 1 |
| 126 | 101.01 | temperature | 15.0 | 720 | < th | dose independent | rect. | 1 | 1 |
| 239 | 105.72 | temperature | 15.0 | 720 | < th | dose independent | sin | 6 | NA |
| 259 | 106.05 | temperature | 15.0 | 720 | < th | dose dependent | sin | 4 | NA |
| 292 | 106.52 | temperature | 15.0 | 720 | > th | dose independent | sin | 6 | NA |
| 449 | 108.18 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 15 | 1 |
| 450 | 108.18 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 15 | 1 |
| 511 | 108.72 | radiation | 40.0 | 1440 | > th | dose independent | rect. | 13 | 2 |
| 588 | 109.00 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 15 | 4 |
| 596 | 109.07 | temperature | 15.0 | 720 | < th | dose dependent | sin | 15 | NA |
| 666 | 109.43 | radiation | 30.0 | 1440 | > th | dose dependent | rect. | 13 | 2 |
| 681 | 109.61 | radiation | 30.0 | 1440 | > th | dose dependent | rect. | 13 | 4 |
| 751 | 110.00 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 13 | 2 |
| 823 | 110.19 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 13 | 14 |
| 824 | 110.20 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 13 | 8 |
| 827 | 110.20 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 13 | 18 |
| 831 | 110.21 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 13 | 6 |
| 840 | 110.22 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 13 | 4 |
| 898 | 110.50 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 17 | 11 |
| 927 | 110.58 | temperature | 15.0 | 720 | > th | dose independent | no | NA | NA |
| 945 | 110.66 | temperature | 30.0 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 960 | 110.67 | temperature | 15.0 | 720 | < th | dose independent | no | NA | NA |
| 970 | 110.72 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 15 | 1 |
| 993 | 110.84 | humidity | 80.0 | 10 | > th | dose independent | rect. | 11 | 1 |