Os11g0512000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : No apical meristem (NAM) protein domain containing protein.
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Os11g0512000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : No apical meristem (NAM) protein domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 133.19 | 0.542 | 2.99 | -0.128 | 0.144 | 5.27 | -0.0646 | 16.9 | 0.0316 | 6.75 | 9.6 | 30 | -- | -- |
| 135.01 | 0.541 | 2.97 | -0.255 | 0.0845 | 1.54 | -0.118 | -- | 0.0208 | 3.26 | 9.652 | 31 | -- | -- |
| 133.09 | 0.537 | 3 | -0.128 | 0.124 | 5.07 | -- | 16 | 0.02 | 7.05 | 9.9 | 29 | -- | -- |
| 134.2 | 0.54 | 2.96 | -0.239 | 0.147 | 1.46 | -- | -- | 0.0454 | 5.44 | 9.927 | 29 | -- | -- |
| 134.07 | 0.539 | 3 | -0.136 | -- | 5.27 | -- | 16.9 | 0.0332 | -- | 10 | 30 | -- | -- |
| 137.68 | 0.55 | 2.97 | -0.268 | 0.124 | -- | 0.0194 | -- | 0.0184 | 7.26 | -- | -- | -- | -- |
| 137.68 | 0.549 | 2.97 | -0.267 | 0.124 | -- | -- | -- | 0.0184 | 7.26 | -- | -- | -- | -- |
| 134.99 | 0.541 | 2.97 | -0.227 | -- | 1.35 | -- | -- | 0.0355 | -- | 9.653 | 29 | -- | -- |
| 135.26 | 0.542 | 2.96 | -- | 0.149 | 1.45 | -- | -- | 0.0644 | 6.54 | 9.717 | 29 | -- | -- |
| 138.49 | 0.55 | 2.98 | -0.265 | -- | -- | -- | -- | 0.0205 | -- | -- | -- | -- | -- |
| 139.56 | 0.553 | 2.97 | -- | 0.121 | -- | -- | -- | 0.0481 | 7.41 | -- | -- | -- | -- |
| 136.34 | 0.544 | 2.97 | -- | -- | 1.44 | -- | -- | 0.0615 | -- | 9.606 | 30 | -- | -- |
| 140.34 | 0.553 | 2.97 | -- | -- | -- | -- | -- | 0.0499 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 124.73 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 24 | 1 |
| 4 | 125.26 | humidity | 60.0 | 1440 | > th | dose independent | rect. | 7 | 2 |
| 5 | 125.36 | wind | 1.0 | 10 | < th | dose independent | rect. | 9 | 3 |
| 7 | 125.48 | wind | 9.0 | 4320 | < th | dose independent | rect. | 1 | 1 |
| 8 | 125.50 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 24 | 1 |
| 11 | 125.54 | wind | 3.0 | 30 | < th | dose independent | rect. | 24 | 1 |
| 13 | 125.56 | wind | 1.0 | 10 | < th | dose dependent | rect. | 6 | 4 |
| 15 | 125.58 | radiation | 40.0 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 17 | 125.65 | wind | 1.0 | 30 | > th | dose independent | rect. | 24 | 1 |
| 18 | 125.65 | humidity | 80.0 | 30 | > th | dose independent | rect. | 24 | 1 |
| 22 | 125.69 | temperature | 10.0 | 30 | > th | dose independent | rect. | 24 | 1 |
| 23 | 125.69 | temperature | 30.0 | 30 | < th | dose independent | rect. | 24 | 1 |
| 24 | 125.69 | humidity | 50.0 | 30 | > th | dose independent | rect. | 24 | 1 |
| 28 | 125.69 | radiation | 1.0 | 30 | < th | dose independent | rect. | 24 | 1 |
| 33 | 125.69 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 24 | 1 |
| 34 | 125.69 | temperature | 10.0 | 30 | > th | dose independent | rect. | 1 | 23 |
| 35 | 125.69 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 24 | 1 |
| 40 | 125.69 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 24 | 1 |
| 41 | 125.70 | wind | 9.0 | 30 | < th | dose independent | rect. | 1 | 23 |
| 43 | 125.74 | wind | 9.0 | 30 | < th | dose dependent | rect. | 24 | 1 |
| 44 | 125.74 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 24 | 1 |
| 45 | 125.75 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 24 | 1 |
| 49 | 125.79 | humidity | 60.0 | 1440 | > th | dose independent | rect. | 3 | 6 |
| 54 | 125.89 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 1 | 1 |
| 57 | 125.89 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 1 | 1 |
| 61 | 125.89 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 1 | 1 |
| 71 | 125.89 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 1 | 1 |
| 72 | 125.89 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 1 | 1 |
| 92 | 125.89 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 2 | 23 |
| 95 | 125.89 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 101 | 125.90 | humidity | 60.0 | 1440 | < th | dose independent | rect. | 8 | 1 |
| 114 | 125.95 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 24 | 1 |
| 116 | 126.00 | humidity | 60.0 | 1440 | < th | dose dependent | rect. | 8 | 1 |
| 129 | 126.02 | temperature | 25.0 | 30 | > th | dose independent | rect. | 24 | 1 |
| 130 | 126.04 | humidity | 90.0 | 30 | < th | dose independent | rect. | 24 | 1 |
| 131 | 126.05 | humidity | 60.0 | 1440 | > th | dose independent | rect. | 24 | 9 |
| 135 | 126.15 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 24 | 1 |
| 138 | 126.21 | humidity | 60.0 | 1440 | > th | dose independent | rect. | 20 | 13 |
| 154 | 126.24 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 24 | 1 |
| 171 | 126.38 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 24 | 1 |
| 175 | 126.47 | wind | 1.0 | 30 | > th | dose dependent | rect. | 24 | 1 |
| 182 | 126.67 | wind | 1.0 | 10 | < th | dose dependent | rect. | 9 | 3 |
| 184 | 126.69 | wind | 1.0 | 10 | < th | dose independent | rect. | 6 | 4 |
| 188 | 126.77 | radiation | 40.0 | 30 | > th | dose dependent | sin | 12 | NA |
| 197 | 126.83 | humidity | 60.0 | 270 | < th | dose independent | rect. | 8 | 1 |
| 223 | 126.83 | humidity | 60.0 | 270 | < th | dose dependent | rect. | 8 | 1 |
| 250 | 126.88 | humidity | 60.0 | 90 | < th | dose dependent | rect. | 18 | 16 |
| 252 | 126.90 | humidity | 60.0 | 90 | < th | dose independent | rect. | 18 | 15 |
| 254 | 126.92 | humidity | 60.0 | 30 | < th | dose independent | rect. | 17 | 17 |
| 287 | 126.99 | humidity | 60.0 | 30 | < th | dose independent | rect. | 9 | 1 |
| 350 | 127.00 | humidity | 60.0 | 10 | < th | dose dependent | rect. | 9 | 1 |
| 454 | 127.07 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 24 | 1 |
| 471 | 127.21 | radiation | 40.0 | 30 | > th | dose dependent | rect. | 9 | 1 |
| 669 | 127.67 | wind | 1.0 | 10 | < th | dose dependent | sin | 22 | NA |
| 766 | 128.37 | wind | 1.0 | 10 | < th | dose independent | sin | 21 | NA |
| 784 | 128.41 | radiation | 40.0 | 90 | > th | dose independent | rect. | 8 | 1 |
| 843 | 128.57 | wind | 1.0 | 10 | > th | dose independent | sin | 22 | NA |
| 939 | 128.89 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 1 | 23 |
| 984 | 129.25 | radiation | 40.0 | 10 | > th | dose independent | rect. | 9 | 1 |