Os11g0501000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0501000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 24.23 | 0.229 | -645 | 3960 | 0.0173 | -190000 | 0.0788 | 1160000 | 0.109 | 9.99 | 995 | 10 | -- | -- |
| 24.04 | 0.23 | 2.89 | -0.0073 | 0.0182 | 1.17 | 0.071 | -- | 0.108 | 10.4 | 995 | 10 | -- | -- |
| 24.25 | 0.229 | -645 | 3960 | 0.0203 | -190000 | -- | 1160000 | 0.109 | 12.3 | 995 | 10 | -- | -- |
| 23.99 | 0.228 | 2.89 | -0.00302 | 0.018 | 1.25 | -- | -- | 0.108 | 12.6 | 994.8 | 11 | -- | -- |
| 24.27 | 0.229 | -645 | 3960 | -- | -190000 | -- | 1160000 | 0.108 | -- | 995 | 10 | -- | -- |
| 25.54 | 0.237 | 2.89 | 0.00268 | 0.0276 | -- | 0.0557 | -- | 0.105 | 13.5 | -- | -- | -- | -- |
| 25.55 | 0.237 | 2.89 | 0.00463 | 0.0284 | -- | -- | -- | 0.105 | 14.2 | -- | -- | -- | -- |
| 24.01 | 0.228 | 2.89 | -0.00399 | -- | 1.25 | -- | -- | 0.108 | -- | 994.8 | 11 | -- | -- |
| 23.99 | 0.228 | 2.89 | -- | 0.018 | 1.25 | -- | -- | 0.108 | 12.7 | 994.8 | 11 | -- | -- |
| 25.59 | 0.236 | 2.89 | 0.00343 | -- | -- | -- | -- | 0.105 | -- | -- | -- | -- | -- |
| 25.55 | 0.236 | 2.89 | -- | 0.0283 | -- | -- | -- | 0.105 | 14.2 | -- | -- | -- | -- |
| 24.01 | 0.228 | 2.89 | -- | -- | 1.25 | -- | -- | 0.108 | -- | 994.8 | 12 | -- | -- |
| 25.59 | 0.236 | 2.89 | -- | -- | -- | -- | -- | 0.104 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 23.96 | atmosphere | 995.0 | 90 | > th | dose independent | sin | 7 | NA |
| 2 | 23.96 | atmosphere | 995.0 | 10 | > th | dose independent | sin | 5 | NA |
| 9 | 24.00 | atmosphere | 995.0 | 90 | < th | dose independent | sin | 6 | NA |
| 10 | 24.00 | atmosphere | 995.0 | 90 | < th | dose dependent | sin | 6 | NA |
| 12 | 24.01 | atmosphere | 995.0 | 10 | < th | dose independent | sin | 5 | NA |
| 14 | 24.01 | atmosphere | 995.0 | 10 | < th | dose independent | rect. | 18 | 22 |
| 18 | 24.01 | atmosphere | 995.0 | 10 | < th | dose dependent | sin | 4 | NA |
| 21 | 24.01 | atmosphere | 995.0 | 10 | < th | dose dependent | rect. | 18 | 23 |
| 24 | 24.02 | atmosphere | 995.0 | 90 | < th | dose independent | rect. | 14 | 1 |
| 25 | 24.02 | atmosphere | 995.0 | 10 | < th | dose independent | rect. | 15 | 1 |
| 154 | 24.02 | atmosphere | 995.0 | 90 | < th | dose dependent | rect. | 14 | 1 |
| 155 | 24.02 | atmosphere | 995.0 | 10 | < th | dose dependent | rect. | 15 | 1 |
| 364 | 24.13 | temperature | 30.0 | 10 | > th | dose dependent | rect. | 16 | 1 |
| 371 | 24.17 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 21 | 23 |
| 372 | 24.17 | temperature | 30.0 | 10 | > th | dose dependent | rect. | 15 | 3 |
| 388 | 24.18 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 392 | 24.19 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 395 | 24.19 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 399 | 24.19 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 405 | 24.19 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 406 | 24.19 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 427 | 24.19 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 22 | 23 |
| 431 | 24.19 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 432 | 24.19 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 489 | 24.21 | temperature | 20.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 499 | 24.22 | wind | 1.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 500 | 24.22 | wind | 5.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 503 | 24.22 | temperature | 10.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 505 | 24.22 | temperature | 30.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 506 | 24.22 | humidity | 50.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 509 | 24.22 | humidity | 90.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 510 | 24.22 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 512 | 24.22 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 514 | 24.22 | radiation | 1.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 519 | 24.22 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 20 | 1 |
| 520 | 24.22 | temperature | 10.0 | 30 | > th | dose independent | rect. | 21 | 23 |
| 521 | 24.22 | wind | 9.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 523 | 24.22 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 525 | 24.22 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 4 | 1 |
| 527 | 24.22 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 534 | 24.22 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 546 | 24.23 | wind | 1.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 549 | 24.23 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 558 | 24.24 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 588 | 24.27 | atmosphere | 995.0 | 10 | < th | dose dependent | no | NA | NA |
| 590 | 24.27 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 807 | 24.29 | humidity | 90.0 | 10 | < th | dose independent | rect. | 4 | 1 |
| 810 | 24.29 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 816 | 24.32 | temperature | 30.0 | 10 | > th | dose dependent | sin | 12 | NA |
| 817 | 24.32 | atmosphere | 995.0 | 10 | < th | dose dependent | sin | 18 | NA |
| 820 | 24.32 | atmosphere | 1000.0 | 10 | > th | dose dependent | rect. | 4 | 1 |
| 828 | 24.33 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 4 | 1 |
| 832 | 24.34 | wind | 1.0 | 10 | > th | dose independent | rect. | 4 | 1 |
| 833 | 24.34 | wind | 3.0 | 10 | < th | dose independent | rect. | 4 | 1 |
| 837 | 24.34 | temperature | 10.0 | 10 | > th | dose independent | rect. | 4 | 1 |
| 840 | 24.34 | temperature | 30.0 | 10 | < th | dose independent | rect. | 4 | 1 |
| 841 | 24.34 | humidity | 50.0 | 10 | > th | dose independent | rect. | 4 | 1 |
| 845 | 24.34 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 4 | 1 |
| 848 | 24.34 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 4 | 1 |
| 850 | 24.34 | radiation | 1.0 | 10 | < th | dose independent | rect. | 4 | 1 |
| 855 | 24.34 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 4 | 1 |
| 856 | 24.34 | temperature | 10.0 | 10 | > th | dose independent | rect. | 5 | 23 |
| 859 | 24.34 | wind | 7.0 | 10 | < th | dose dependent | rect. | 4 | 1 |
| 863 | 24.34 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 4 | 1 |
| 868 | 24.34 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 4 | 1 |
| 872 | 24.35 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 4 | 1 |
| 882 | 24.37 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 17 | 23 |
| 885 | 24.37 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 4 | 1 |
| 944 | 24.38 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 4 | 1 |
| 969 | 24.40 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 5 | 23 |
| 971 | 24.40 | wind | 1.0 | 30 | > th | dose dependent | rect. | 4 | 1 |
| 977 | 24.41 | temperature | 25.0 | 10 | > th | dose independent | rect. | 4 | 1 |
| 988 | 24.42 | wind | 7.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 991 | 24.42 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 994 | 24.42 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 998 | 24.42 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 5 | 1 |