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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os11g0492700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Esterase/lipase/thioesterase domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.86 (0.0265) R2 : 0.00127
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0426 (0.0559) R2dN8 : 0.00164 R2N8 : 0.00127
σ : 0.5
deviance : 114.72
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
101.63 0.474 2.93 0.136 0.153 10.2 -0.0157 20.6 0.0516 3.86 1016 1566 -- --
112.92 0.495 2.84 0.0173 0.153 0.23 -0.0622 -- 0.0678 4.18 1010 2491 -- --
101.29 0.469 2.94 0.139 0.154 10.4 -- 21.1 0.0453 3.05 1016 1554 -- --
111.88 0.493 2.85 0.0312 0.158 0.606 -- -- 0.0575 4.73 1013 1646 -- --
102.32 0.471 2.93 0.163 -- 11.6 -- 23.4 0.0617 -- 1016 1549 -- --
113.49 0.499 2.86 -0.00359 0.152 -- 0.00191 -- 0.0388 4.71 -- -- -- --
113.49 0.499 2.86 -0.0036 0.152 -- -- -- 0.0388 4.71 -- -- -- --
113.26 0.496 2.85 0.0339 -- 0.579 -- -- 0.0603 -- 1013 1663 -- --
111.89 0.493 2.85 -- 0.164 0.584 -- -- 0.0525 4.47 1013 1657 -- --
114.72 0.5 2.86 0.00217 -- -- -- -- 0.0428 -- -- -- -- --
113.49 0.498 2.86 -- 0.152 -- -- -- 0.0392 4.71 -- -- -- --
113.29 0.496 2.86 -- -- 0.572 -- -- 0.0553 -- 1013 1674 -- --
114.72 0.5 2.86 -- -- -- -- -- 0.0426 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 99.80 atmosphere 1015 1440 < th dose independent rect. 2 10
3 99.83 atmosphere 1015 1440 < th dose independent rect. 5 6
8 99.85 atmosphere 1015 1440 < th dose independent rect. 8 3
11 99.88 atmosphere 1015 1440 < th dose independent rect. 11 1
13 99.89 atmosphere 1015 1440 > th dose independent rect. 3 9
14 99.89 atmosphere 1015 1440 > th dose dependent rect. 3 8
21 99.96 atmosphere 1015 1440 > th dose independent rect. 10 1
38 99.96 atmosphere 1015 1440 > th dose dependent rect. 10 1
61 100.05 atmosphere 1010 270 > th dose independent rect. 5 1
82 100.21 atmosphere 1010 270 > th dose dependent rect. 5 1
96 100.60 atmosphere 1010 90 > th dose dependent rect. 8 1
126 101.13 atmosphere 1015 1440 > th dose dependent sin 3 NA
291 102.53 atmosphere 1015 1440 > th dose independent sin 3 NA
412 103.14 atmosphere 1015 1440 < th dose independent sin 3 NA
557 105.09 temperature 20 270 < th dose dependent rect. 6 1
632 106.83 atmosphere 1010 90 > th dose independent rect. 8 1
633 106.83 atmosphere 1010 10 > th dose independent rect. 9 1
698 106.88 atmosphere 1010 720 > th dose dependent rect. 23 4
711 106.92 atmosphere 1015 1440 > th dose dependent no NA NA
749 106.92 atmosphere 1015 1440 > th dose dependent rect. 16 23
754 106.93 atmosphere 1015 1440 > th dose dependent rect. 19 20
783 107.14 atmosphere 1010 720 > th dose dependent rect. 1 1
784 107.16 atmosphere 1015 1440 < th dose independent rect. 13 1
897 108.00 radiation 10 1440 > th dose independent rect. 5 1
909 108.00 radiation 10 1440 > th dose dependent rect. 5 1
922 108.03 radiation 30 270 > th dose dependent rect. 7 1
951 108.18 wind 5 10 > th dose independent rect. 9 1
979 108.23 radiation 20 90 < th dose independent rect. 9 1