Os11g0490600 - FiT-DB

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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os11g0490600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.

log2(Expression) ~ Norm(μ, σ²)

μ = α + β₁D + β₂C + β₃E + β₄D*C + β₅D*E + γ₁N8

par.		value	(S.E.)
α	:	3.16	(0.0301)	R²	:	0.00026
β₁	:	--	(--)	R²_dD	:	--	R²_D	:	--
β₂	:	--	(--)	R²_dC	:	--	R²_C	:	--
β₃	:	--	(--)	R²_dE	:	--	R²_E	:	--
β₄	:	--	(--)	R²_dD*C	:	--	R²_D*C	:	--
β₅	:	--	(--)	R²_dD*E	:	--	R²_D*E	:	--
γ₁	:	0.0218	(0.0634)	R²_dN8	:	0.000335	R²_N8	:	0.00026
σ	:	0.567
deviance	:	147.51
__

_____

C
peak time of C	:	--
E
wheather	:	--
threshold	:	--
memory length	:	--
response mode	:	--
dose dependency	:	--
G
type of G	:	--
peak or start time of G	:	--
open length of G	:	--

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance	σ	α	β₁	β₂	β₃	β₄	β₅	γ₁	peak time of C	threshold	memory length	peak or start time of G	open length of G
128.93	0.533	3.19	-0.626	0.293	-0.268	-0.992	-1.14	-0.0327	10	21.52	841	--	--
131.29	0.534	3.17	-0.334	0.283	-0.248	-0.678	--	-0.05	10.5	29.8	1093	--	--
131.03	0.533	3.19	-0.671	0.323	-0.264	--	-1.22	-0.0266	10.2	21.5	2107	--	--
132.36	0.536	3.18	-0.369	0.293	-0.281	--	--	-0.0677	10.4	30.9	3067	--	--
137.41	0.546	3.2	-0.694	--	-0.259	--	-1.23	-0.042	--	21.6	2166	--	--
133.81	0.542	3.16	-0.41	0.34	--	-0.618	--	-0.0249	10.2	--	--	--	--
135.32	0.545	3.16	-0.434	0.343	--	--	--	-0.0263	10.1	--	--	--	--
138.39	0.548	3.15	-0.328	--	-0.285	--	--	0.0845	--	24.2	843	--	--
135.5	0.542	3.17	--	0.329	-0.34	--	--	-0.0524	9.99	30.8	2997	--	--
142.43	0.558	3.17	-0.439	--	--	--	--	-0.0269	--	--	--	--	--
140.29	0.554	3.15	--	0.345	--	--	--	0.022	10.2	--	--	--	--
141.02	0.553	3.14	--	--	-0.349	--	--	0.14	--	24.1	854	--	--
147.51	0.567	3.16	--	--	--	--	--	0.0218	--	--	--	--	--

Results of the grid search

Summarized heatmap of deviance

Histogram

Local optima within top1000 grid-points

rank	deviance	wheather	threshold	memory length	response mode	dose dependency	type of G	peak or start time of G	open length of G
1	126.32	humidity	80.0	10	< th	dose independent	rect.	5	5
7	127.14	temperature	20.0	270	> th	dose independent	rect.	7	1
10	127.26	wind	3.0	10	< th	dose dependent	rect.	8	2
13	127.43	atmosphere	1010.0	270	< th	dose independent	rect.	7	1
14	127.47	radiation	40.0	30	> th	dose independent	rect.	9	1
37	127.62	temperature	30.0	720	< th	dose dependent	rect.	22	11
40	127.63	atmosphere	1015.0	270	< th	dose dependent	rect.	7	1
44	127.68	temperature	10.0	720	> th	dose dependent	rect.	19	17
45	127.73	radiation	40.0	30	> th	dose dependent	rect.	14	20
46	127.74	temperature	30.0	270	< th	dose dependent	rect.	7	1
47	127.75	radiation	30.0	30	> th	dose dependent	rect.	9	1
48	127.75	radiation	30.0	30	> th	dose dependent	rect.	7	3
64	127.76	radiation	1.0	1440	> th	dose independent	rect.	14	1
85	127.78	temperature	30.0	270	< th	dose dependent	rect.	5	4
86	127.79	humidity	90.0	14400	< th	dose dependent	rect.	24	1
88	127.82	wind	3.0	10	< th	dose independent	rect.	8	2
89	127.82	atmosphere	1000.0	720	> th	dose independent	rect.	1	8
114	127.86	radiation	40.0	30	> th	dose independent	sin	11	NA
115	127.87	temperature	20.0	90	> th	dose independent	rect.	7	4
124	127.97	radiation	1.0	4320	< th	dose dependent	rect.	14	2
148	127.99	atmosphere	1015.0	270	< th	dose dependent	rect.	6	3
150	128.00	atmosphere	1000.0	720	> th	dose independent	rect.	21	16
151	128.01	atmosphere	1000.0	90	< th	dose independent	rect.	5	5
153	128.02	atmosphere	1000.0	10	< th	dose independent	rect.	4	7
162	128.05	atmosphere	1000.0	90	< th	dose independent	rect.	7	3
165	128.06	atmosphere	1000.0	10	< th	dose independent	rect.	8	2
170	128.07	atmosphere	1000.0	90	< th	dose independent	rect.	8	1
183	128.08	atmosphere	1000.0	270	< th	dose independent	rect.	5	3
205	128.10	atmosphere	1000.0	270	< th	dose independent	rect.	6	1
224	128.13	radiation	30.0	270	< th	dose independent	rect.	7	1
237	128.16	temperature	25.0	270	< th	dose independent	rect.	7	1
240	128.17	radiation	1.0	1440	< th	dose independent	rect.	14	1
251	128.20	temperature	20.0	10	> th	dose dependent	rect.	8	1
253	128.20	temperature	20.0	720	> th	dose dependent	rect.	2	4
254	128.20	temperature	10.0	720	> th	dose dependent	rect.	1	5
258	128.22	temperature	20.0	720	> th	dose dependent	rect.	3	1
283	128.27	atmosphere	1000.0	10	< th	dose independent	rect.	24	11
292	128.29	radiation	1.0	270	> th	dose independent	rect.	7	1
294	128.29	humidity	80.0	10	< th	dose independent	rect.	20	14
305	128.32	radiation	30.0	30	> th	dose dependent	sin	11	NA
309	128.34	temperature	25.0	10	> th	dose independent	rect.	8	1
310	128.34	humidity	70.0	90	> th	dose independent	rect.	7	3
315	128.35	atmosphere	1000.0	90	< th	dose dependent	rect.	9	1
321	128.36	temperature	10.0	720	> th	dose dependent	sin	8	NA
353	128.41	wind	1.0	43200	< th	dose dependent	rect.	18	3
356	128.41	atmosphere	1000.0	720	< th	dose dependent	rect.	22	7
359	128.42	radiation	40.0	270	< th	dose dependent	rect.	7	1
366	128.44	temperature	20.0	90	> th	dose independent	rect.	7	16
380	128.47	temperature	30.0	720	< th	dose dependent	sin	8	NA
381	128.47	atmosphere	1015.0	30	< th	dose dependent	rect.	8	1
384	128.48	humidity	70.0	270	> th	dose independent	rect.	7	1
393	128.49	atmosphere	1015.0	10	< th	dose dependent	rect.	7	5
415	128.53	atmosphere	1000.0	90	< th	dose dependent	rect.	5	5
426	128.55	atmosphere	1000.0	270	< th	dose dependent	rect.	5	3
444	128.57	radiation	1.0	14400	< th	dose dependent	rect.	6	11
455	128.59	temperature	25.0	1440	> th	dose independent	rect.	6	3
461	128.59	atmosphere	1000.0	30	< th	dose dependent	rect.	4	7
475	128.61	temperature	30.0	90	< th	dose independent	rect.	7	4
478	128.61	radiation	40.0	30	< th	dose dependent	rect.	8	1
529	128.64	wind	9.0	4320	> th	dose dependent	rect.	18	14
537	128.65	radiation	40.0	30	< th	dose independent	rect.	8	1
539	128.65	humidity	60.0	30	> th	dose dependent	rect.	8	1
544	128.66	temperature	25.0	1440	< th	dose independent	rect.	6	3
567	128.67	atmosphere	1000.0	270	< th	dose independent	sin	6	NA
568	128.67	humidity	70.0	30	> th	dose independent	rect.	8	1
586	128.69	atmosphere	1000.0	270	> th	dose independent	sin	5	NA
587	128.69	precipitation	0.1	270	< th	dose independent	rect.	7	1
589	128.69	humidity	50.0	270	> th	dose dependent	rect.	7	1
590	128.69	precipitation	0.1	270	< th	dose dependent	rect.	7	1
593	128.70	wind	7.0	90	< th	dose independent	rect.	7	4
608	128.71	humidity	80.0	10	< th	dose independent	sin	7	NA
611	128.71	atmosphere	1000.0	720	< th	dose independent	rect.	22	9
612	128.71	temperature	30.0	90	< th	dose independent	rect.	7	16
618	128.72	temperature	30.0	1440	< th	dose dependent	rect.	7	1
620	128.72	temperature	30.0	1440	< th	dose dependent	rect.	6	3
630	128.73	temperature	10.0	1440	> th	dose dependent	rect.	7	1
632	128.73	temperature	15.0	1440	> th	dose dependent	rect.	6	3
642	128.74	wind	9.0	4320	> th	dose dependent	rect.	18	3
654	128.75	atmosphere	1000.0	720	< th	dose independent	rect.	22	7
678	128.76	wind	9.0	270	< th	dose independent	rect.	7	1
679	128.76	temperature	10.0	270	> th	dose independent	rect.	7	1
681	128.76	temperature	10.0	1440	> th	dose independent	rect.	9	1
685	128.76	humidity	50.0	270	> th	dose independent	rect.	7	1
687	128.76	atmosphere	995.0	270	> th	dose independent	rect.	7	1
688	128.76	atmosphere	995.0	1440	> th	dose independent	rect.	9	1
692	128.76	atmosphere	1015.0	1440	< th	dose independent	rect.	9	1
695	128.76	atmosphere	1010.0	270	< th	dose independent	rect.	6	3
696	128.76	radiation	1.0	90	> th	dose independent	rect.	7	4
697	128.76	temperature	10.0	270	> th	dose independent	rect.	8	23
698	128.76	temperature	10.0	1440	> th	dose independent	rect.	10	23
705	128.77	wind	1.0	30	> th	dose independent	rect.	8	1
706	128.77	wind	7.0	30	< th	dose independent	rect.	8	1
708	128.77	temperature	10.0	30	> th	dose independent	rect.	8	1
710	128.77	temperature	30.0	30	< th	dose independent	rect.	8	1
711	128.77	humidity	50.0	30	> th	dose independent	rect.	8	1
713	128.77	atmosphere	995.0	30	> th	dose independent	rect.	8	1
714	128.77	atmosphere	1010.0	30	< th	dose independent	rect.	8	1
716	128.77	radiation	1.0	30	> th	dose independent	rect.	8	1
717	128.77	precipitation	0.1	30	< th	dose independent	rect.	8	1
718	128.77	temperature	10.0	30	> th	dose independent	rect.	9	23
719	128.77	precipitation	0.1	30	< th	dose dependent	rect.	8	1
733	128.78	radiation	1.0	14400	< th	dose dependent	rect.	6	1
738	128.78	wind	9.0	10	< th	dose dependent	rect.	7	5
746	128.79	radiation	1.0	30	> th	dose dependent	rect.	7	3
747	128.79	wind	9.0	90	< th	dose dependent	rect.	7	4
752	128.80	temperature	25.0	1440	> th	dose independent	rect.	7	1
754	128.80	radiation	1.0	4320	> th	dose independent	rect.	11	5
756	128.80	temperature	25.0	1440	> th	dose dependent	rect.	7	1
765	128.81	temperature	10.0	4320	> th	dose dependent	rect.	19	4
766	128.81	temperature	30.0	4320	< th	dose dependent	rect.	19	4
778	128.82	radiation	1.0	4320	< th	dose independent	rect.	8	8
780	128.82	temperature	10.0	4320	> th	dose dependent	rect.	21	1
781	128.82	temperature	30.0	4320	< th	dose dependent	rect.	21	1
787	128.82	humidity	70.0	14400	> th	dose dependent	rect.	24	8
816	128.85	humidity	50.0	90	> th	dose independent	rect.	7	4
849	128.88	radiation	1.0	4320	> th	dose independent	rect.	9	7
862	128.88	humidity	50.0	14400	> th	dose dependent	rect.	24	7
880	128.90	humidity	90.0	30	< th	dose independent	rect.	8	1
893	128.90	temperature	20.0	720	> th	dose dependent	rect.	21	12
921	128.92	precipitation	0.1	90	< th	dose independent	rect.	7	4
922	128.92	radiation	1.0	4320	< th	dose independent	rect.	11	5
931	128.92	precipitation	0.1	90	< th	dose dependent	rect.	7	4
957	128.93	atmosphere	995.0	30	> th	dose dependent	rect.	8	1
990	128.94	atmosphere	995.0	90	> th	dose independent	rect.	7	4
995	128.94	temperature	10.0	90	> th	dose independent	rect.	11	20