Os11g0488900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Zinc finger, MYND-type domain containing protein.
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Os11g0488900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Zinc finger, MYND-type domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 212.97 | 0.686 | 2.96 | 0.165 | 0.0598 | 0.433 | 0.0749 | -1.76 | -0.109 | 4.82 | 90.08 | 1335 | -- | -- |
| 217.5 | 0.687 | 2.94 | -0.013 | 0.0962 | 0.43 | 0.0742 | -- | -0.135 | 2.81 | 91 | 1235 | -- | -- |
| 212.98 | 0.68 | 2.96 | 0.164 | 0.0607 | 0.435 | -- | -1.76 | -0.109 | 4.18 | 90.08 | 1335 | -- | -- |
| 217.51 | 0.687 | 2.95 | -0.0231 | 0.0863 | 0.424 | -- | -- | -0.134 | 2.69 | 90.65 | 1235 | -- | -- |
| 213.17 | 0.68 | 2.96 | 0.169 | -- | 0.422 | -- | -1.77 | -0.11 | -- | 90.07 | 1335 | -- | -- |
| 220.39 | 0.696 | 2.96 | 0.0419 | 0.039 | -- | 0.125 | -- | -0.203 | 5.18 | -- | -- | -- | -- |
| 220.42 | 0.695 | 2.96 | 0.0416 | 0.0408 | -- | -- | -- | -0.204 | 4.13 | -- | -- | -- | -- |
| 217.9 | 0.688 | 2.95 | -0.0144 | -- | 0.399 | -- | -- | -0.136 | -- | 90.58 | 1256 | -- | -- |
| 217.52 | 0.687 | 2.95 | -- | 0.0851 | 0.419 | -- | -- | -0.132 | 2.69 | 90.66 | 1235 | -- | -- |
| 220.51 | 0.694 | 2.96 | 0.0433 | -- | -- | -- | -- | -0.203 | -- | -- | -- | -- | -- |
| 220.47 | 0.695 | 2.96 | -- | 0.0416 | -- | -- | -- | -0.209 | 4.11 | -- | -- | -- | -- |
| 217.91 | 0.688 | 2.95 | -- | -- | 0.393 | -- | -- | -0.136 | -- | 90.48 | 1258 | -- | -- |
| 220.56 | 0.693 | 2.96 | -- | -- | -- | -- | -- | -0.208 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 205.91 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 7 | 1 |
| 3 | 208.43 | atmosphere | 1005.0 | 270 | < th | dose independent | rect. | 6 | 1 |
| 4 | 208.58 | atmosphere | 1005.0 | 10 | < th | dose independent | rect. | 7 | 3 |
| 8 | 208.85 | atmosphere | 1005.0 | 90 | < th | dose independent | rect. | 6 | 4 |
| 14 | 209.19 | radiation | 1.0 | 10 | > th | dose independent | rect. | 17 | 1 |
| 27 | 209.46 | wind | 1.0 | 10 | < th | dose dependent | rect. | 1 | 1 |
| 29 | 209.66 | temperature | 25.0 | 30 | > th | dose independent | rect. | 7 | 1 |
| 35 | 210.27 | wind | 1.0 | 90 | < th | dose independent | rect. | 6 | 1 |
| 39 | 210.78 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 17 | 1 |
| 67 | 210.78 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 17 | 1 |
| 95 | 210.82 | humidity | 90.0 | 10 | > th | dose independent | rect. | 17 | 1 |
| 106 | 210.82 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 17 | 1 |
| 135 | 211.35 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 11 | 7 |
| 137 | 211.37 | temperature | 15.0 | 270 | > th | dose independent | rect. | 19 | 10 |
| 139 | 211.54 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 14 | 2 |
| 142 | 211.75 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 15 | 1 |
| 144 | 211.78 | wind | 1.0 | 10 | < th | dose independent | rect. | 1 | 1 |
| 145 | 211.81 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 15 | 1 |
| 149 | 212.01 | temperature | 25.0 | 10 | > th | dose independent | rect. | 17 | 1 |
| 176 | 212.08 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 12 | 1 |
| 179 | 212.21 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 18 | 3 |
| 182 | 212.23 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 12 | 4 |
| 186 | 212.32 | temperature | 15.0 | 90 | > th | dose independent | rect. | 10 | 14 |
| 187 | 212.32 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 21 | 20 |
| 192 | 212.41 | temperature | 15.0 | 10 | > th | dose independent | rect. | 20 | 11 |
| 198 | 212.45 | temperature | 15.0 | 720 | > th | dose independent | rect. | 13 | 9 |
| 209 | 212.46 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 4 | 20 |
| 214 | 212.48 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 23 | 18 |
| 226 | 212.61 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 20 | 16 |
| 227 | 212.62 | temperature | 15.0 | 720 | > th | dose independent | rect. | 10 | 12 |
| 230 | 212.63 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 6 | 12 |
| 233 | 212.65 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 15 | 1 |
| 234 | 212.65 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 15 | 1 |
| 240 | 212.69 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 4 | 18 |
| 255 | 212.80 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 4 | 14 |
| 260 | 212.82 | humidity | 90.0 | 1440 | > th | dose independent | sin | 0 | NA |
| 265 | 212.83 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 21 | 20 |
| 269 | 212.86 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 3 | 14 |
| 273 | 212.86 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 3 | 21 |
| 278 | 212.88 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 23 | 18 |
| 281 | 212.91 | radiation | 40.0 | 90 | > th | dose dependent | rect. | 8 | 1 |
| 299 | 212.91 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 21 | 20 |
| 301 | 212.92 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 12 | 5 |
| 302 | 212.92 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 3 | 14 |
| 306 | 212.93 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 12 | 5 |
| 309 | 212.93 | humidity | 80.0 | 1440 | > th | dose dependent | sin | 2 | NA |
| 331 | 213.00 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 3 | 19 |
| 339 | 213.01 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 23 | 23 |
| 355 | 213.06 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 23 | 18 |
| 372 | 213.09 | humidity | 90.0 | 1440 | < th | dose independent | sin | 1 | NA |
| 373 | 213.09 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 15 | 1 |
| 376 | 213.09 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 14 | 3 |
| 380 | 213.09 | humidity | 50.0 | 1440 | > th | dose dependent | sin | 7 | NA |
| 381 | 213.09 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 15 | 1 |
| 418 | 213.16 | wind | 1.0 | 90 | < th | dose dependent | rect. | 6 | 1 |
| 421 | 213.17 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 12 | 2 |
| 435 | 213.19 | humidity | 90.0 | 1440 | > th | dose independent | no | NA | NA |
| 459 | 213.23 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 7 | 23 |
| 461 | 213.23 | atmosphere | 1010.0 | 90 | < th | dose dependent | rect. | 7 | 3 |
| 487 | 213.28 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 13 | 23 |
| 537 | 213.37 | atmosphere | 1005.0 | 10 | < th | dose independent | rect. | 1 | 10 |
| 599 | 213.46 | temperature | 15.0 | 720 | > th | dose independent | rect. | 15 | 7 |
| 634 | 213.49 | atmosphere | 1010.0 | 270 | < th | dose dependent | rect. | 6 | 1 |
| 689 | 213.58 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 3 | 19 |
| 691 | 213.58 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 3 | 21 |
| 692 | 213.59 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 11 | 2 |
| 696 | 213.59 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 11 | 2 |
| 722 | 213.63 | wind | 9.0 | 10 | > th | dose independent | rect. | 15 | 1 |
| 732 | 213.63 | wind | 9.0 | 10 | > th | dose dependent | rect. | 15 | 1 |
| 773 | 213.67 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 20 | 15 |
| 775 | 213.68 | humidity | 80.0 | 1440 | > th | dose independent | sin | 7 | NA |
| 784 | 213.69 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 13 | 11 |
| 815 | 213.72 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 23 | 23 |
| 844 | 213.75 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 23 | 23 |
| 847 | 213.76 | temperature | 15.0 | 270 | > th | dose independent | rect. | 18 | 22 |
| 889 | 213.80 | temperature | 15.0 | 90 | > th | dose independent | rect. | 10 | 17 |
| 898 | 213.81 | wind | 1.0 | 270 | > th | dose independent | rect. | 7 | 23 |
| 933 | 213.85 | humidity | 90.0 | 1440 | < th | dose independent | no | NA | NA |
| 965 | 213.88 | temperature | 15.0 | 10 | > th | dose independent | rect. | 10 | 23 |
| 966 | 213.88 | humidity | 80.0 | 1440 | > th | dose dependent | no | NA | NA |
| 973 | 213.89 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 12 | 2 |
| 974 | 213.89 | temperature | 15.0 | 270 | > th | dose independent | rect. | 7 | 23 |
| 980 | 213.90 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 13 | 23 |
| 981 | 213.90 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 15 | 23 |