Os11g0488500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : 2OG-Fe(II) oxygenase domain containing protein.
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Os11g0488500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : 2OG-Fe(II) oxygenase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 53.14 | 0.343 | 8.48 | -0.217 | 0.72 | -0.678 | -0.359 | -0.0536 | -0.562 | 16.3 | 26.2 | 80 | -- | -- |
| 53.09 | 0.339 | 8.48 | -0.226 | 0.719 | -0.673 | -0.346 | -- | -0.566 | 16.3 | 26.3 | 63 | -- | -- |
| 53.4 | 0.34 | 8.48 | -0.229 | 0.727 | -0.644 | -- | 0.118 | -0.571 | 16.4 | 26.29 | 65 | -- | -- |
| 53.41 | 0.34 | 8.48 | -0.228 | 0.72 | -0.675 | -- | -- | -0.566 | 16.4 | 26.2 | 63 | -- | -- |
| 73.38 | 0.399 | 8.49 | -0.414 | -- | -1.18 | -- | 0.233 | -0.673 | -- | 29.33 | 84 | -- | -- |
| 59.67 | 0.362 | 8.44 | -0.0594 | 0.865 | -- | -0.323 | -- | -0.417 | 16 | -- | -- | -- | -- |
| 59.97 | 0.363 | 8.44 | -0.0635 | 0.863 | -- | -- | -- | -0.419 | 16 | -- | -- | -- | -- |
| 73.44 | 0.399 | 8.5 | -0.403 | -- | -1.19 | -- | -- | -0.673 | -- | 29.2 | 84 | -- | -- |
| 54.64 | 0.344 | 8.47 | -- | 0.741 | -0.583 | -- | -- | -0.524 | 16.3 | 26.2 | 57 | -- | -- |
| 100.66 | 0.469 | 8.44 | -0.0987 | -- | -- | -- | -- | -0.442 | -- | -- | -- | -- | -- |
| 60.08 | 0.363 | 8.44 | -- | 0.865 | -- | -- | -- | -0.412 | 16 | -- | -- | -- | -- |
| 76.86 | 0.408 | 8.48 | -- | -- | -1.07 | -- | -- | -0.613 | -- | 29.26 | 56 | -- | -- |
| 100.91 | 0.469 | 8.44 | -- | -- | -- | -- | -- | -0.431 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 41.04 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 23 | 7 |
| 2 | 41.43 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 1 | 4 |
| 10 | 43.33 | temperature | 20.0 | 90 | < th | dose independent | rect. | 1 | 5 |
| 15 | 43.75 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 3 |
| 32 | 44.54 | temperature | 20.0 | 10 | < th | dose independent | rect. | 24 | 8 |
| 34 | 44.58 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 19 | 14 |
| 35 | 44.61 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 3 | 5 |
| 69 | 45.34 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 19 | 14 |
| 116 | 45.96 | temperature | 20.0 | 90 | > th | dose dependent | sin | 8 | NA |
| 149 | 46.28 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 6 | 21 |
| 198 | 46.67 | wind | 9.0 | 90 | < th | dose dependent | rect. | 6 | 21 |
| 228 | 46.90 | temperature | 20.0 | 270 | > th | dose independent | rect. | 19 | 15 |
| 242 | 47.01 | atmosphere | 1000.0 | 30 | > th | dose dependent | rect. | 3 | 3 |
| 249 | 47.08 | wind | 1.0 | 270 | > th | dose independent | rect. | 1 | 4 |
| 279 | 47.34 | temperature | 30.0 | 90 | < th | dose dependent | sin | 8 | NA |
| 283 | 47.37 | temperature | 30.0 | 10 | < th | dose dependent | sin | 7 | NA |
| 309 | 47.51 | wind | 5.0 | 90 | < th | dose independent | rect. | 3 | 3 |
| 405 | 48.12 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 17 | 8 |
| 414 | 48.17 | wind | 5.0 | 270 | < th | dose independent | rect. | 1 | 4 |
| 419 | 48.19 | wind | 9.0 | 90 | < th | dose independent | rect. | 6 | 21 |
| 448 | 48.41 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 3 | 3 |
| 449 | 48.41 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 3 | 3 |
| 475 | 48.52 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 6 | 21 |
| 476 | 48.52 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 6 | 21 |
| 500 | 48.62 | temperature | 10.0 | 90 | > th | dose independent | rect. | 3 | 3 |
| 503 | 48.62 | humidity | 50.0 | 90 | > th | dose independent | rect. | 3 | 3 |
| 506 | 48.62 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 3 | 3 |
| 507 | 48.62 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 3 | 3 |
| 509 | 48.62 | radiation | 20.0 | 90 | < th | dose independent | rect. | 3 | 3 |
| 513 | 48.62 | temperature | 10.0 | 90 | > th | dose independent | rect. | 6 | 21 |
| 528 | 48.69 | temperature | 20.0 | 10 | > th | dose independent | rect. | 6 | 22 |
| 529 | 48.69 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 1 | 10 |
| 543 | 48.75 | temperature | 20.0 | 10 | > th | dose independent | rect. | 20 | 18 |
| 551 | 48.77 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 16 | 16 |
| 559 | 48.82 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 1 | 20 |
| 561 | 48.83 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 1 | 5 |
| 562 | 48.83 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 19 | 8 |
| 565 | 48.84 | temperature | 15.0 | 90 | > th | dose independent | rect. | 15 | 15 |
| 569 | 48.85 | wind | 9.0 | 90 | < th | dose dependent | rect. | 3 | 3 |
| 571 | 48.86 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 3 | 3 |
| 575 | 48.87 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 15 | 15 |
| 584 | 48.91 | wind | 1.0 | 270 | > th | dose independent | rect. | 13 | 16 |
| 588 | 48.93 | wind | 9.0 | 1440 | < th | dose independent | rect. | 4 | 3 |
| 589 | 48.93 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 3 |
| 592 | 48.93 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 4 | 3 |
| 596 | 48.93 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 4 | 3 |
| 601 | 48.93 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 4 | 3 |
| 602 | 48.93 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 4 | 3 |
| 603 | 48.93 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 4 | 3 |
| 609 | 48.93 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 7 | 21 |
| 617 | 48.95 | wind | 1.0 | 270 | > th | dose independent | rect. | 1 | 16 |
| 620 | 48.95 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 20 | 8 |
| 621 | 48.95 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 3 | 17 |
| 655 | 49.02 | temperature | 20.0 | 10 | > th | dose independent | sin | 5 | NA |
| 687 | 49.14 | wind | 9.0 | 90 | < th | dose independent | rect. | 6 | 9 |
| 690 | 49.15 | temperature | 20.0 | 10 | < th | dose independent | sin | 6 | NA |
| 719 | 49.21 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 4 |
| 725 | 49.21 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 4 |
| 732 | 49.25 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 4 |
| 735 | 49.25 | humidity | 50.0 | 270 | > th | dose independent | rect. | 1 | 4 |
| 738 | 49.25 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 4 |
| 739 | 49.25 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 1 | 4 |
| 741 | 49.25 | radiation | 20.0 | 270 | < th | dose independent | rect. | 1 | 4 |
| 749 | 49.26 | temperature | 20.0 | 90 | < th | dose independent | rect. | 1 | 13 |
| 750 | 49.26 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 1 | 4 |
| 765 | 49.29 | radiation | 1.0 | 270 | < th | dose independent | rect. | 1 | 10 |
| 773 | 49.31 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 15 | 15 |
| 775 | 49.32 | radiation | 1.0 | 270 | < th | dose independent | rect. | 1 | 4 |
| 787 | 49.35 | temperature | 25.0 | 90 | > th | dose independent | sin | 8 | NA |
| 793 | 49.36 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 1 | 17 |
| 797 | 49.37 | radiation | 1.0 | 270 | < th | dose dependent | sin | 6 | NA |
| 806 | 49.39 | wind | 1.0 | 10 | > th | dose independent | rect. | 2 | 4 |
| 808 | 49.39 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 6 | 9 |
| 811 | 49.39 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 6 | 9 |
| 816 | 49.40 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 14 | 18 |
| 819 | 49.41 | temperature | 20.0 | 90 | > th | dose independent | sin | 6 | NA |
| 845 | 49.48 | temperature | 15.0 | 90 | > th | dose independent | rect. | 6 | 9 |
| 851 | 49.50 | wind | 7.0 | 270 | < th | dose independent | rect. | 17 | 8 |
| 853 | 49.50 | radiation | 40.0 | 90 | < th | dose independent | rect. | 15 | 15 |
| 870 | 49.53 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 6 | 9 |
| 882 | 49.54 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 3 | 3 |
| 897 | 49.58 | temperature | 15.0 | 10 | > th | dose independent | rect. | 16 | 14 |
| 919 | 49.62 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 16 |
| 932 | 49.65 | temperature | 20.0 | 90 | < th | dose independent | sin | 6 | NA |
| 954 | 49.68 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 6 | 9 |
| 963 | 49.69 | wind | 9.0 | 90 | < th | dose independent | rect. | 15 | 15 |