Os11g0487600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cytochrome P450 family protein.
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Os11g0487600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cytochrome P450 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 304.73 | 0.82 | 13.1 | 2.14 | 2.16 | -2.55 | -0.746 | -1.51 | -0.221 | 10.7 | 5.357 | 59 | 15.9 | -- |
| 308.01 | 0.817 | 13.1 | 2.11 | 2.19 | -2.54 | -0.298 | -- | -0.23 | 10.7 | 5.407 | 59 | 16 | -- |
| 306.49 | 0.815 | 13.1 | 2.11 | 2.18 | -2.54 | -- | -1.03 | -0.225 | 10.7 | 5.331 | 59 | 16 | -- |
| 308.37 | 0.818 | 13.1 | 2.09 | 2.2 | -2.53 | -- | -- | -0.231 | 10.7 | 5.399 | 59 | 16 | -- |
| 352.91 | 0.875 | 13.2 | 2 | -- | -3.34 | -- | -0.669 | -0.278 | -- | 28.81 | 72 | 10.4 | -- |
| 422.52 | 0.964 | 13.1 | 2.13 | 3.15 | -- | -0.112 | -- | -0.18 | 9.77 | -- | -- | -- | -- |
| 422.57 | 0.963 | 13.1 | 2.13 | 3.15 | -- | -- | -- | -0.18 | 9.76 | -- | -- | -- | -- |
| 347.96 | 0.869 | 13.1 | 2.15 | -- | -3.15 | -- | -- | -0.188 | -- | 8.34 | 4 | 9.96 | -- |
| 423.43 | 0.958 | 13.2 | -- | 2.15 | -2.61 | -- | -- | -0.464 | 10.6 | 4.364 | 59 | 16 | -- |
| 1014.13 | 1.49 | 13.2 | 2.1 | -- | -- | -- | -- | -0.177 | -- | -- | -- | -- | -- |
| 541.84 | 1.09 | 13.1 | -- | 3.15 | -- | -- | -- | -0.417 | 9.71 | -- | -- | -- | -- |
| 456.67 | 0.995 | 13.2 | -- | -- | -3.26 | -- | -- | -0.537 | -- | 22.38 | 59 | 10.4 | -- |
| 1130.09 | 1.57 | 13.2 | -- | -- | -- | -- | -- | -0.41 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 316.18 | radiation | 1 | 30 | > th | dose independent | sin | 22 | NA |
| 2 | 317.20 | radiation | 1 | 30 | < th | dose independent | sin | 22 | NA |
| 3 | 317.42 | radiation | 10 | 720 | < th | dose dependent | rect. | 11 | 8 |
| 4 | 317.95 | radiation | 10 | 720 | < th | dose dependent | rect. | 13 | 6 |
| 7 | 318.53 | radiation | 10 | 90 | < th | dose dependent | sin | 21 | NA |
| 15 | 322.47 | radiation | 10 | 720 | < th | dose dependent | rect. | 11 | 16 |
| 21 | 323.80 | radiation | 10 | 90 | < th | dose dependent | rect. | 9 | 10 |
| 27 | 324.75 | radiation | 1 | 90 | < th | dose independent | rect. | 8 | 11 |
| 80 | 331.01 | radiation | 1 | 90 | < th | dose dependent | rect. | 5 | 14 |
| 99 | 332.51 | radiation | 40 | 720 | < th | dose dependent | rect. | 14 | 5 |
| 102 | 332.72 | radiation | 10 | 720 | > th | dose independent | rect. | 11 | 20 |
| 112 | 333.24 | radiation | 1 | 30 | < th | dose independent | rect. | 5 | 15 |
| 118 | 333.99 | radiation | 10 | 720 | < th | dose independent | rect. | 14 | 5 |
| 121 | 334.13 | radiation | 10 | 720 | > th | dose independent | rect. | 11 | 5 |
| 184 | 337.15 | radiation | 10 | 720 | < th | dose independent | rect. | 14 | 13 |
| 195 | 337.66 | radiation | 10 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 204 | 338.13 | radiation | 1 | 90 | < th | dose independent | rect. | 17 | 2 |
| 221 | 338.50 | radiation | 1 | 10 | < th | dose dependent | rect. | 5 | 15 |
| 234 | 338.97 | radiation | 10 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 237 | 339.06 | radiation | 10 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 238 | 339.12 | radiation | 10 | 30 | < th | dose dependent | no | NA | NA |
| 239 | 339.12 | radiation | 10 | 30 | < th | dose dependent | rect. | 13 | 23 |
| 241 | 339.24 | radiation | 10 | 30 | < th | dose dependent | rect. | 15 | 23 |
| 259 | 339.52 | radiation | 20 | 1440 | < th | dose dependent | rect. | 11 | 2 |
| 277 | 339.73 | radiation | 10 | 1440 | > th | dose independent | rect. | 8 | 5 |
| 278 | 339.73 | radiation | 10 | 720 | < th | dose independent | rect. | 11 | 8 |
| 283 | 339.79 | radiation | 10 | 1440 | < th | dose dependent | rect. | 10 | 4 |
| 305 | 340.64 | radiation | 10 | 720 | < th | dose independent | rect. | 11 | 16 |
| 318 | 340.95 | radiation | 10 | 1440 | < th | dose dependent | rect. | 13 | 1 |
| 319 | 340.96 | radiation | 10 | 1440 | > th | dose independent | rect. | 8 | 8 |
| 329 | 341.12 | radiation | 10 | 90 | < th | dose dependent | rect. | 7 | 23 |
| 351 | 341.72 | radiation | 10 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 380 | 342.30 | radiation | 10 | 1440 | > th | dose independent | rect. | 17 | 23 |
| 402 | 342.70 | radiation | 10 | 1440 | > th | dose independent | sin | 0 | NA |
| 431 | 343.16 | radiation | 10 | 720 | < th | dose dependent | sin | 19 | NA |
| 440 | 343.34 | radiation | 10 | 1440 | > th | dose independent | rect. | 8 | 22 |
| 564 | 344.20 | radiation | 1 | 10 | < th | dose dependent | rect. | 15 | 5 |
| 579 | 344.37 | humidity | 80 | 720 | < th | dose independent | rect. | 12 | 3 |
| 647 | 345.31 | radiation | 10 | 1440 | > th | dose independent | rect. | 15 | 23 |
| 654 | 345.42 | radiation | 10 | 1440 | > th | dose independent | no | NA | NA |
| 775 | 345.96 | radiation | 20 | 4320 | < th | dose dependent | rect. | 22 | 7 |
| 950 | 347.91 | humidity | 50 | 10 | > th | dose dependent | rect. | 17 | 19 |
| 963 | 348.03 | radiation | 10 | 720 | < th | dose dependent | rect. | 23 | 20 |