Os11g0485500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0485500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 69.95 | 0.393 | 6.96 | -0.534 | 0.331 | 1.09 | -0.793 | -0.854 | -0.0253 | 21.4 | 24.5 | 2644 | -- | -- |
| 70.17 | 0.39 | 6.98 | -0.758 | 0.358 | 0.901 | -1 | -- | -0.0806 | 20.5 | 23.7 | 2391 | -- | -- |
| 72.21 | 0.396 | 6.96 | -0.553 | 0.334 | 1.09 | -- | -0.69 | -0.0382 | 21.5 | 24.4 | 2638 | -- | -- |
| 70.98 | 0.392 | 6.98 | -0.799 | 0.351 | 0.888 | -- | -- | -0.0813 | 20 | 23 | 1981 | -- | -- |
| 77.46 | 0.41 | 6.95 | -0.522 | -- | 1.09 | -- | -0.769 | -0.0391 | -- | 24.41 | 2849 | -- | -- |
| 101.77 | 0.473 | 7.06 | -1.18 | 0.315 | -- | -0.828 | -- | -0.438 | 19.9 | -- | -- | -- | -- |
| 103.69 | 0.477 | 7.06 | -1.16 | 0.321 | -- | -- | -- | -0.438 | 19.5 | -- | -- | -- | -- |
| 76.07 | 0.406 | 6.98 | -0.823 | -- | 0.866 | -- | -- | -0.126 | -- | 22.8 | 1477 | -- | -- |
| 77.02 | 0.409 | 6.96 | -- | 0.301 | 1.34 | -- | -- | 0.047 | 19.7 | 21 | 6085 | -- | -- |
| 109.19 | 0.488 | 7.06 | -1.16 | -- | -- | -- | -- | -0.444 | -- | -- | -- | -- | -- |
| 138.94 | 0.551 | 7.03 | -- | 0.332 | -- | -- | -- | -0.31 | 19.2 | -- | -- | -- | -- |
| 82.54 | 0.423 | 6.95 | -- | -- | 1.37 | -- | -- | 0.04 | -- | 21 | 5917 | -- | -- |
| 144.78 | 0.562 | 7.03 | -- | -- | -- | -- | -- | -0.315 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 68.20 | temperature | 20 | 1440 | > th | dose dependent | rect. | 21 | 9 |
| 61 | 69.17 | temperature | 20 | 1440 | > th | dose dependent | sin | 11 | NA |
| 118 | 69.89 | temperature | 30 | 1440 | < th | dose dependent | rect. | 20 | 11 |
| 122 | 69.90 | temperature | 20 | 1440 | > th | dose dependent | rect. | 5 | 1 |
| 181 | 70.11 | temperature | 25 | 4320 | < th | dose dependent | rect. | 2 | 1 |
| 188 | 70.13 | temperature | 30 | 1440 | < th | dose dependent | sin | 11 | NA |
| 244 | 70.25 | temperature | 20 | 720 | > th | dose dependent | rect. | 17 | 21 |
| 266 | 70.31 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 4 |
| 386 | 70.50 | temperature | 10 | 4320 | > th | dose dependent | rect. | 2 | 1 |
| 387 | 70.50 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 421 | 70.55 | temperature | 10 | 1440 | > th | dose dependent | rect. | 22 | 1 |
| 823 | 71.09 | temperature | 25 | 1440 | < th | dose independent | sin | 16 | NA |
| 824 | 71.09 | temperature | 25 | 1440 | < th | dose independent | rect. | 14 | 13 |
| 914 | 71.19 | temperature | 25 | 1440 | < th | dose independent | rect. | 10 | 17 |