Os11g0483000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cytochrome P450 family protein.
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Os11g0483000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cytochrome P450 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 441.13 | 0.987 | 8.16 | -0.875 | 0.715 | -1.46 | -1.73 | -7.59 | 0.812 | 0.85 | 19.85 | 89 | -- | -- |
| 481.3 | 1.02 | 8 | 0.549 | 0.632 | -1.78 | 0.149 | -- | 1.2 | 1.48 | 21.39 | 13 | -- | -- |
| 450.16 | 0.988 | 8.13 | -0.556 | 0.771 | -1.49 | -- | -5.97 | 0.884 | 0.682 | 19.98 | 108 | -- | -- |
| 479.96 | 1.02 | 8 | 0.511 | 0.677 | -1.83 | -- | -- | 1.19 | 0.77 | 21.31 | 79 | -- | -- |
| 471.74 | 1.02 | 8.06 | -0.207 | -- | -2.2 | -- | -5.03 | 1.07 | -- | 19.98 | 108 | -- | -- |
| 534.92 | 1.08 | 8.06 | 0.137 | 1.32 | -- | 0.79 | -- | 0.894 | 2.11 | -- | -- | -- | -- |
| 537.22 | 1.09 | 8.06 | 0.114 | 1.31 | -- | -- | -- | 0.89 | 2.01 | -- | -- | -- | -- |
| 496.48 | 1.04 | 7.95 | 0.649 | -- | -2.45 | -- | -- | 1.32 | -- | 21.1 | 18 | -- | -- |
| 486.39 | 1.03 | 8.02 | -- | 0.717 | -1.7 | -- | -- | 1.11 | 0.836 | 21.95 | 80 | -- | -- |
| 641.06 | 1.18 | 8.05 | 0.169 | -- | -- | -- | -- | 0.921 | -- | -- | -- | -- | -- |
| 537.56 | 1.08 | 8.07 | -- | 1.32 | -- | -- | -- | 0.877 | 2.02 | -- | -- | -- | -- |
| 506.6 | 1.05 | 7.98 | -- | -- | -2.33 | -- | -- | 1.23 | -- | 21.28 | 11 | -- | -- |
| 641.81 | 1.18 | 8.06 | -- | -- | -- | -- | -- | 0.902 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 436.99 | temperature | 20 | 10 | > th | dose dependent | rect. | 8 | 21 |
| 2 | 438.80 | temperature | 20 | 90 | > th | dose dependent | rect. | 7 | 22 |
| 5 | 439.15 | temperature | 20 | 90 | > th | dose dependent | rect. | 5 | 23 |
| 6 | 439.48 | temperature | 20 | 10 | > th | dose dependent | rect. | 6 | 23 |
| 10 | 440.12 | temperature | 20 | 10 | > th | dose dependent | rect. | 8 | 23 |
| 12 | 440.27 | temperature | 30 | 90 | < th | dose dependent | rect. | 11 | 23 |
| 17 | 440.42 | temperature | 20 | 30 | > th | dose dependent | rect. | 23 | 23 |
| 20 | 440.94 | temperature | 20 | 90 | > th | dose dependent | rect. | 13 | 23 |
| 23 | 441.18 | temperature | 20 | 90 | > th | dose dependent | no | NA | NA |
| 24 | 441.37 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 27 | 441.67 | temperature | 20 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 28 | 441.67 | temperature | 20 | 30 | > th | dose dependent | rect. | 21 | 23 |
| 31 | 441.86 | temperature | 20 | 30 | > th | dose dependent | rect. | 3 | 23 |
| 33 | 442.03 | temperature | 20 | 90 | > th | dose dependent | rect. | 15 | 23 |
| 41 | 442.27 | temperature | 30 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 48 | 442.87 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 57 | 443.74 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 61 | 443.85 | temperature | 30 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 73 | 444.24 | temperature | 30 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 86 | 444.80 | temperature | 30 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 91 | 444.96 | temperature | 20 | 90 | > th | dose dependent | rect. | 1 | 23 |
| 92 | 444.99 | temperature | 20 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 112 | 446.23 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 118 | 446.65 | temperature | 30 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 120 | 446.67 | temperature | 30 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 129 | 447.18 | temperature | 30 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 145 | 448.03 | temperature | 30 | 90 | < th | dose dependent | rect. | 15 | 20 |
| 154 | 448.56 | temperature | 20 | 10 | > th | dose dependent | rect. | 11 | 23 |
| 280 | 452.46 | temperature | 30 | 10 | < th | dose dependent | rect. | 5 | 23 |
| 378 | 454.81 | temperature | 20 | 720 | > th | dose dependent | rect. | 23 | 21 |
| 466 | 455.94 | temperature | 20 | 10 | > th | dose dependent | sin | 15 | NA |
| 642 | 458.53 | temperature | 20 | 90 | > th | dose dependent | rect. | 11 | 17 |
| 651 | 458.64 | temperature | 20 | 720 | > th | dose dependent | sin | 21 | NA |
| 800 | 460.42 | wind | 3 | 720 | > th | dose dependent | rect. | 11 | 2 |
| 883 | 461.61 | wind | 9 | 720 | > th | dose dependent | rect. | 20 | 20 |
| 927 | 462.03 | wind | 9 | 720 | > th | dose dependent | rect. | 1 | 16 |
| 932 | 462.05 | wind | 9 | 720 | > th | dose dependent | rect. | 9 | 8 |
| 969 | 462.40 | wind | 7 | 270 | > th | dose dependent | sin | 15 | NA |