Os11g0482500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Zinc finger, FYVE/PHD-type domain containing protein.
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Os11g0482500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Zinc finger, FYVE/PHD-type domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 61.63 | 0.369 | 6.24 | 0.843 | 0.308 | -0.756 | 0.331 | 3.53 | 0.408 | 8.98 | 20.92 | 407 | -- | -- |
| 68.14 | 0.384 | 6.31 | 0.214 | 0.385 | -0.675 | -0.363 | -- | 0.225 | 6.79 | 14.37 | 826 | -- | -- |
| 61.85 | 0.366 | 6.24 | 0.815 | 0.332 | -0.766 | -- | 3.46 | 0.398 | 9.46 | 21.29 | 332 | -- | -- |
| 68.44 | 0.385 | 6.31 | 0.209 | 0.419 | -0.644 | -- | -- | 0.219 | 6.94 | 14.35 | 909 | -- | -- |
| 65.88 | 0.378 | 6.23 | 0.951 | -- | -0.97 | -- | 3.81 | 0.454 | -- | 21.68 | 496 | -- | -- |
| 74.1 | 0.404 | 6.33 | 0.0334 | 0.504 | -- | -0.156 | -- | 0.117 | 7.62 | -- | -- | -- | -- |
| 74.16 | 0.403 | 6.33 | 0.0299 | 0.503 | -- | -- | -- | 0.117 | 7.68 | -- | -- | -- | -- |
| 73.27 | 0.399 | 6.31 | 0.262 | -- | -0.941 | -- | -- | 0.267 | -- | 15.3 | 599 | -- | -- |
| 69.41 | 0.388 | 6.32 | -- | 0.432 | -0.551 | -- | -- | 0.185 | 7.04 | 13.78 | 908 | -- | -- |
| 87.8 | 0.438 | 6.34 | 0.0366 | -- | -- | -- | -- | 0.125 | -- | -- | -- | -- | -- |
| 74.18 | 0.403 | 6.33 | -- | 0.503 | -- | -- | -- | 0.114 | 7.68 | -- | -- | -- | -- |
| 74.9 | 0.403 | 6.32 | -- | -- | -0.82 | -- | -- | 0.226 | -- | 16 | 574 | -- | -- |
| 87.84 | 0.437 | 6.34 | -- | -- | -- | -- | -- | 0.121 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 58.18 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 8 |
| 5 | 58.22 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 3 |
| 6 | 58.23 | wind | 1 | 43200 | > th | dose independent | rect. | 2 | 1 |
| 7 | 58.23 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 14 | 58.72 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 2 |
| 17 | 58.72 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 7 |
| 24 | 58.75 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 35 | 59.25 | wind | 1 | 43200 | < th | dose dependent | rect. | 2 | 1 |
| 37 | 59.29 | temperature | 20 | 1440 | < th | dose independent | rect. | 4 | 2 |
| 38 | 59.33 | wind | 3 | 43200 | > th | dose independent | rect. | 12 | 2 |
| 40 | 59.45 | wind | 1 | 43200 | < th | dose independent | rect. | 2 | 1 |
| 41 | 59.45 | wind | 3 | 43200 | < th | dose independent | rect. | 11 | 3 |
| 42 | 59.48 | wind | 3 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 43 | 59.58 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 12 |
| 45 | 59.64 | radiation | 1 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 46 | 59.66 | temperature | 20 | 1440 | > th | dose independent | rect. | 4 | 2 |
| 51 | 59.83 | radiation | 1 | 14400 | < th | dose dependent | rect. | 24 | 6 |
| 61 | 59.86 | wind | 5 | 43200 | < th | dose dependent | rect. | 11 | 4 |
| 72 | 59.89 | wind | 1 | 43200 | > th | dose independent | rect. | 24 | 1 |
| 99 | 60.09 | temperature | 20 | 720 | > th | dose dependent | rect. | 20 | 17 |
| 123 | 60.24 | wind | 1 | 43200 | > th | dose dependent | rect. | 12 | 4 |
| 125 | 60.26 | wind | 3 | 43200 | > th | dose dependent | rect. | 15 | 1 |
| 135 | 60.36 | wind | 1 | 43200 | > th | dose independent | rect. | 23 | 3 |
| 142 | 60.39 | wind | 5 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 143 | 60.39 | wind | 1 | 43200 | > th | dose independent | rect. | 8 | 4 |
| 146 | 60.40 | temperature | 20 | 1440 | > th | dose dependent | rect. | 18 | 4 |
| 147 | 60.41 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 2 | 1 |
| 148 | 60.41 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 151 | 60.43 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 1 | 4 |
| 152 | 60.44 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 2 | 2 |
| 155 | 60.44 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 2 |
| 160 | 60.47 | wind | 5 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 186 | 60.58 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 10 | 3 |
| 187 | 60.58 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 10 | 3 |
| 242 | 60.68 | wind | 1 | 43200 | < th | dose independent | rect. | 23 | 3 |
| 246 | 60.69 | temperature | 20 | 1440 | > th | dose dependent | rect. | 16 | 14 |
| 257 | 60.74 | wind | 1 | 43200 | < th | dose independent | rect. | 24 | 1 |
| 269 | 60.76 | humidity | 90 | 14400 | > th | dose dependent | rect. | 24 | 1 |
| 288 | 60.78 | humidity | 90 | 14400 | > th | dose independent | rect. | 21 | 7 |
| 353 | 60.88 | atmosphere | 1010 | 14400 | > th | dose dependent | rect. | 11 | 1 |
| 364 | 60.90 | wind | 3 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 365 | 60.90 | humidity | 90 | 14400 | > th | dose dependent | rect. | 23 | 3 |
| 372 | 60.92 | temperature | 20 | 1440 | > th | dose dependent | sin | 13 | NA |
| 389 | 60.95 | temperature | 20 | 720 | > th | dose dependent | sin | 7 | NA |
| 407 | 60.98 | humidity | 90 | 14400 | > th | dose dependent | rect. | 21 | 6 |
| 412 | 60.99 | radiation | 1 | 43200 | < th | dose independent | rect. | 16 | 19 |
| 566 | 61.14 | radiation | 1 | 43200 | > th | dose independent | rect. | 16 | 19 |
| 577 | 61.15 | radiation | 1 | 43200 | < th | dose independent | rect. | 7 | 11 |
| 580 | 61.15 | atmosphere | 1010 | 14400 | > th | dose dependent | sin | 13 | NA |
| 592 | 61.15 | atmosphere | 1010 | 14400 | > th | dose dependent | rect. | 10 | 20 |
| 608 | 61.17 | humidity | 70 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 609 | 61.17 | radiation | 1 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 613 | 61.17 | radiation | 1 | 43200 | < th | dose independent | rect. | 7 | 23 |
| 628 | 61.18 | radiation | 1 | 43200 | < th | dose independent | sin | 13 | NA |
| 629 | 61.18 | humidity | 70 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 654 | 61.19 | humidity | 90 | 14400 | > th | dose independent | rect. | 21 | 4 |
| 673 | 61.19 | atmosphere | 1010 | 14400 | > th | dose dependent | rect. | 15 | 21 |
| 682 | 61.20 | atmosphere | 1010 | 14400 | > th | dose dependent | no | NA | NA |
| 700 | 61.20 | atmosphere | 1010 | 14400 | > th | dose dependent | rect. | 3 | 21 |
| 712 | 61.21 | radiation | 1 | 43200 | < th | dose independent | rect. | 5 | 13 |
| 730 | 61.21 | atmosphere | 1010 | 14400 | > th | dose dependent | rect. | 5 | 19 |
| 760 | 61.22 | wind | 3 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 761 | 61.22 | temperature | 20 | 4320 | < th | dose independent | rect. | 22 | 1 |
| 801 | 61.23 | radiation | 1 | 43200 | > th | dose independent | rect. | 5 | 6 |
| 840 | 61.24 | radiation | 1 | 43200 | < th | dose independent | rect. | 5 | 6 |
| 875 | 61.25 | radiation | 1 | 43200 | > th | dose independent | rect. | 7 | 11 |
| 928 | 61.26 | atmosphere | 1010 | 14400 | > th | dose dependent | sin | 23 | NA |
| 947 | 61.27 | radiation | 1 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 994 | 61.28 | atmosphere | 1010 | 14400 | > th | dose dependent | rect. | 5 | 14 |