Os11g0482200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os11g0482200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 542.69 | 1.09 | 3.99 | 0.981 | 1.57 | -2.25 | -1.79 | 0.687 | 0.709 | 4.27 | 68.84 | 1453 | -- | -- |
| 543.69 | 1.09 | 4 | 0.9 | 1.57 | -2.22 | -1.78 | -- | 0.691 | 4.27 | 68.77 | 1458 | -- | -- |
| 550.72 | 1.09 | 3.99 | 1 | 1.55 | -2.29 | -- | 0.683 | 0.719 | 4.01 | 68.65 | 1458 | -- | -- |
| 551.72 | 1.09 | 4 | 0.921 | 1.55 | -2.25 | -- | -- | 0.701 | 3.99 | 68.58 | 1458 | -- | -- |
| 615.85 | 1.16 | 3.98 | 1.18 | -- | -3.24 | -- | 1.03 | 1.01 | -- | 70 | 1807 | -- | -- |
| 745.01 | 1.28 | 4 | 0.415 | 1.48 | -- | -2.35 | -- | 0.694 | 4.32 | -- | -- | -- | -- |
| 759.24 | 1.29 | 4 | 0.435 | 1.47 | -- | -- | -- | 0.707 | 3.98 | -- | -- | -- | -- |
| 618.9 | 1.16 | 3.92 | 0.96 | -- | -3.13 | -- | -- | 1.09 | -- | 70.12 | 1801 | -- | -- |
| 573.45 | 1.12 | 4.02 | -- | 1.57 | -2.12 | -- | -- | 0.601 | 3.99 | 68.67 | 1458 | -- | -- |
| 876.49 | 1.38 | 4 | 0.495 | -- | -- | -- | -- | 0.746 | -- | -- | -- | -- | -- |
| 764.23 | 1.29 | 4.01 | -- | 1.47 | -- | -- | -- | 0.658 | 3.98 | -- | -- | -- | -- |
| 642.67 | 1.18 | 3.95 | -- | -- | -3.01 | -- | -- | 0.969 | -- | 70.53 | 1815 | -- | -- |
| 882.96 | 1.39 | 4.02 | -- | -- | -- | -- | -- | 0.691 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 541.61 | humidity | 70 | 1440 | < th | dose independent | rect. | 18 | 21 |
| 3 | 543.23 | humidity | 70 | 1440 | < th | dose independent | rect. | 10 | 5 |
| 5 | 546.27 | humidity | 70 | 1440 | < th | dose independent | rect. | 10 | 21 |
| 11 | 546.54 | humidity | 70 | 1440 | < th | dose independent | rect. | 10 | 10 |
| 43 | 549.55 | humidity | 70 | 1440 | < th | dose independent | sin | 23 | NA |
| 47 | 550.56 | humidity | 70 | 1440 | > th | dose independent | rect. | 18 | 21 |
| 66 | 551.47 | wind | 9 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 67 | 551.50 | humidity | 80 | 43200 | > th | dose dependent | rect. | 12 | 1 |
| 68 | 551.53 | humidity | 70 | 1440 | < th | dose independent | no | NA | NA |
| 69 | 551.53 | humidity | 70 | 1440 | < th | dose independent | rect. | 6 | 14 |
| 161 | 553.79 | temperature | 25 | 43200 | < th | dose dependent | rect. | 9 | 1 |
| 175 | 554.17 | humidity | 70 | 1440 | < th | dose independent | rect. | 6 | 10 |
| 195 | 554.90 | wind | 3 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 199 | 555.10 | radiation | 30 | 1440 | < th | dose dependent | rect. | 11 | 22 |
| 213 | 555.45 | radiation | 1 | 1440 | > th | dose dependent | rect. | 12 | 21 |
| 220 | 556.18 | wind | 3 | 43200 | > th | dose dependent | rect. | 24 | 9 |
| 223 | 556.22 | humidity | 70 | 1440 | > th | dose independent | rect. | 10 | 4 |
| 228 | 556.43 | temperature | 25 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 242 | 556.65 | wind | 3 | 43200 | > th | dose dependent | rect. | 3 | 6 |
| 261 | 557.73 | radiation | 20 | 1440 | > th | dose independent | rect. | 11 | 22 |
| 263 | 557.79 | radiation | 20 | 1440 | < th | dose independent | rect. | 11 | 22 |
| 265 | 557.89 | temperature | 25 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 269 | 557.97 | temperature | 10 | 14400 | > th | dose dependent | rect. | 11 | 2 |
| 279 | 558.31 | wind | 5 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 293 | 558.37 | wind | 9 | 43200 | < th | dose dependent | rect. | 1 | 4 |
| 317 | 558.94 | wind | 5 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 320 | 559.05 | wind | 1 | 43200 | > th | dose dependent | rect. | 1 | 4 |
| 367 | 559.87 | humidity | 70 | 1440 | > th | dose independent | rect. | 9 | 23 |
| 376 | 559.98 | temperature | 10 | 14400 | > th | dose dependent | rect. | 10 | 15 |
| 380 | 560.05 | temperature | 10 | 14400 | > th | dose dependent | rect. | 14 | 2 |
| 389 | 560.16 | humidity | 70 | 1440 | > th | dose independent | rect. | 9 | 14 |
| 390 | 560.16 | humidity | 70 | 1440 | > th | dose independent | rect. | 9 | 20 |
| 392 | 560.17 | wind | 9 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 393 | 560.17 | humidity | 70 | 1440 | > th | dose independent | rect. | 9 | 16 |
| 395 | 560.18 | humidity | 70 | 1440 | > th | dose independent | rect. | 9 | 11 |
| 396 | 560.18 | humidity | 70 | 1440 | > th | dose independent | rect. | 9 | 18 |
| 432 | 560.41 | radiation | 10 | 1440 | > th | dose dependent | rect. | 11 | 6 |
| 472 | 560.59 | temperature | 10 | 14400 | > th | dose dependent | sin | 20 | NA |
| 522 | 560.77 | temperature | 10 | 14400 | > th | dose dependent | rect. | 5 | 12 |
| 610 | 561.17 | humidity | 70 | 1440 | > th | dose independent | sin | 0 | NA |
| 656 | 561.28 | radiation | 1 | 1440 | > th | dose dependent | sin | 20 | NA |
| 676 | 561.33 | radiation | 10 | 1440 | > th | dose dependent | sin | 18 | NA |
| 750 | 561.46 | radiation | 20 | 1440 | < th | dose independent | rect. | 11 | 6 |
| 786 | 561.56 | temperature | 30 | 14400 | < th | dose dependent | rect. | 9 | 18 |
| 837 | 561.69 | temperature | 10 | 14400 | > th | dose dependent | no | NA | NA |
| 969 | 562.12 | radiation | 40 | 1440 | < th | dose dependent | sin | 21 | NA |