Os11g0481600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0481600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 82 | 0.425 | 3.12 | -0.398 | 0.139 | 6.37 | -0.0562 | -51.2 | 0.00472 | 7.67 | 25.05 | 10 | 5.3 | 1.01 |
| 109.09 | 0.49 | 3.06 | 0.102 | 0.134 | 0.844 | -0.229 | -- | 0.00178 | 7.44 | 25.05 | 10 | 5.3 | 1.01 |
| 73.3 | 0.402 | 3.1 | -0.32 | 0.134 | 3.58 | -- | -30.4 | 0.00725 | 7.76 | 25.05 | 10 | 5.3 | 1.01 |
| 106.55 | 0.481 | 3.07 | 0.0993 | 0.119 | 1.26 | -- | -- | 0.00563 | 8.28 | 24.71 | 22 | 5.65 | 0.497 |
| 74.22 | 0.401 | 3.11 | -0.318 | -- | 3.65 | -- | -30.3 | 0.0105 | -- | 24.8 | 13 | 5.33 | 0.978 |
| 113.82 | 0.5 | 3.07 | 0.113 | 0.184 | -- | -0.157 | -- | -0.0142 | 7.14 | -- | -- | -- | -- |
| 113.88 | 0.5 | 3.07 | 0.11 | 0.184 | -- | -- | -- | -0.0138 | 7.21 | -- | -- | -- | -- |
| 106.97 | 0.482 | 3.07 | 0.0997 | -- | 1.34 | -- | -- | -0.00107 | -- | 24.73 | 23 | 5.63 | 1.03 |
| 106.77 | 0.481 | 3.07 | -- | 0.121 | 1.29 | -- | -- | -0.00353 | 7.92 | 24.73 | 22 | 5.64 | 0.544 |
| 115.67 | 0.503 | 3.07 | 0.113 | -- | -- | -- | -- | -0.0106 | -- | -- | -- | -- | -- |
| 114.2 | 0.5 | 3.07 | -- | 0.185 | -- | -- | -- | -0.026 | 7.17 | -- | -- | -- | -- |
| 106.05 | 0.48 | 3.07 | -- | -- | 1.54 | -- | -- | -0.00757 | -- | 24.7 | 29 | 5.5 | 1.05 |
| 116 | 0.503 | 3.07 | -- | -- | -- | -- | -- | -0.0232 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 88.04 | temperature | 25 | 10 | > th | dose independent | rect. | 5 | 1 |
| 3 | 101.13 | atmosphere | 1005 | 90 | < th | dose dependent | rect. | 5 | 1 |
| 11 | 102.34 | atmosphere | 1000 | 90 | < th | dose dependent | rect. | 10 | 1 |
| 12 | 102.34 | atmosphere | 1000 | 10 | < th | dose dependent | rect. | 10 | 2 |
| 24 | 102.92 | wind | 1 | 10 | < th | dose independent | rect. | 12 | 1 |
| 26 | 102.92 | wind | 1 | 10 | < th | dose dependent | rect. | 12 | 1 |
| 29 | 103.00 | atmosphere | 1000 | 90 | < th | dose independent | rect. | 10 | 1 |
| 56 | 104.87 | humidity | 90 | 10 | < th | dose independent | rect. | 5 | 1 |
| 57 | 105.15 | wind | 1 | 10 | < th | dose dependent | rect. | 1 | 1 |
| 59 | 105.25 | temperature | 20 | 30 | > th | dose dependent | rect. | 5 | 1 |
| 79 | 106.32 | temperature | 30 | 90 | > th | dose dependent | rect. | 10 | 1 |
| 98 | 106.72 | wind | 1 | 10 | < th | dose independent | rect. | 1 | 1 |
| 132 | 107.54 | radiation | 10 | 10 | > th | dose independent | rect. | 6 | 1 |
| 158 | 107.54 | radiation | 10 | 10 | > th | dose dependent | rect. | 6 | 1 |
| 188 | 107.74 | temperature | 30 | 270 | > th | dose dependent | rect. | 8 | 1 |
| 202 | 107.80 | temperature | 30 | 270 | > th | dose independent | rect. | 8 | 1 |
| 220 | 107.90 | temperature | 30 | 90 | > th | dose independent | rect. | 10 | 1 |
| 226 | 107.96 | atmosphere | 1005 | 10 | < th | dose independent | rect. | 5 | 1 |
| 358 | 108.72 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 8 | 5 |
| 505 | 109.54 | temperature | 30 | 90 | > th | dose dependent | sin | 9 | NA |
| 579 | 109.75 | temperature | 20 | 10 | < th | dose independent | rect. | 2 | 1 |
| 585 | 109.79 | radiation | 10 | 10 | < th | dose dependent | rect. | 5 | 2 |
| 592 | 109.86 | atmosphere | 1005 | 30 | > th | dose dependent | rect. | 1 | 1 |
| 599 | 109.89 | atmosphere | 1000 | 720 | > th | dose independent | rect. | 21 | 14 |
| 612 | 109.96 | atmosphere | 1000 | 720 | > th | dose independent | rect. | 23 | 10 |
| 614 | 109.96 | temperature | 25 | 720 | > th | dose dependent | rect. | 19 | 1 |
| 620 | 109.98 | wind | 1 | 90 | > th | dose independent | rect. | 4 | 2 |
| 624 | 110.00 | humidity | 80 | 14400 | < th | dose dependent | rect. | 6 | 3 |
| 634 | 110.03 | wind | 3 | 30 | < th | dose dependent | rect. | 6 | 1 |
| 658 | 110.10 | temperature | 20 | 10 | > th | dose independent | rect. | 4 | 3 |
| 691 | 110.16 | wind | 1 | 1440 | < th | dose dependent | rect. | 8 | 1 |
| 693 | 110.16 | atmosphere | 1005 | 30 | > th | dose dependent | rect. | 6 | 1 |
| 755 | 110.37 | humidity | 70 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 756 | 110.37 | humidity | 70 | 14400 | > th | dose independent | rect. | 4 | 5 |
| 758 | 110.37 | humidity | 70 | 14400 | > th | dose independent | rect. | 21 | 12 |
| 761 | 110.38 | humidity | 70 | 14400 | > th | dose independent | rect. | 6 | 3 |
| 792 | 110.44 | humidity | 80 | 30 | > th | dose dependent | rect. | 6 | 1 |
| 817 | 110.52 | atmosphere | 1000 | 720 | > th | dose independent | rect. | 5 | 6 |
| 822 | 110.53 | temperature | 30 | 270 | > th | dose independent | sin | 10 | NA |
| 836 | 110.56 | atmosphere | 1000 | 270 | > th | dose independent | rect. | 6 | 11 |
| 859 | 110.61 | wind | 3 | 10 | < th | dose dependent | rect. | 4 | 4 |
| 862 | 110.62 | atmosphere | 1000 | 720 | < th | dose independent | rect. | 24 | 12 |
| 875 | 110.65 | wind | 1 | 1440 | < th | dose independent | rect. | 8 | 1 |
| 886 | 110.67 | wind | 1 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 910 | 110.72 | wind | 1 | 1440 | > th | dose independent | rect. | 8 | 1 |
| 911 | 110.72 | humidity | 70 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 971 | 110.81 | wind | 1 | 14400 | < th | dose dependent | rect. | 5 | 4 |
| 982 | 110.83 | radiation | 10 | 10 | < th | dose independent | rect. | 4 | 3 |
| 995 | 110.85 | temperature | 30 | 30 | < th | dose dependent | rect. | 6 | 1 |
| 1000 | 110.86 | humidity | 90 | 10 | < th | dose independent | rect. | 3 | 18 |