Os11g0481500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0481500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 206.84 | 0.676 | 9.68 | -0.807 | 1.62 | -1.77 | 0.632 | 2.49 | -0.135 | 21.5 | 19.4 | 706 | 0.872 | -- |
| 216.37 | 0.685 | 9.63 | -0.415 | 1.64 | -2.01 | -0.464 | -- | -0.052 | 21.7 | 19.46 | 637 | 0.347 | -- |
| 207.94 | 0.672 | 9.67 | -0.759 | 1.64 | -1.76 | -- | 2.18 | -0.0986 | 21.5 | 19.4 | 705 | 0.718 | -- |
| 215.94 | 0.684 | 9.63 | -0.455 | 1.63 | -2.14 | -- | -- | -0.0407 | 21.6 | 19.36 | 648 | 0.000228 | -- |
| 278.91 | 0.778 | 9.52 | -0.0958 | -- | -2.19 | -- | 1.35 | 0.25 | -- | 31.2 | 601 | 0.953 | -- |
| 280.72 | 0.785 | 9.58 | -0.0436 | 1.96 | -- | -0.971 | -- | 0.217 | 21.9 | -- | -- | -- | -- |
| 284.26 | 0.79 | 9.58 | -0.00469 | 1.97 | -- | -- | -- | 0.22 | 21.8 | -- | -- | -- | -- |
| 283.46 | 0.784 | 9.52 | -0.0341 | -- | -2.08 | -- | -- | 0.239 | -- | 32.72 | 589 | 1.03 | -- |
| 221.71 | 0.693 | 9.62 | -- | 1.64 | -1.98 | -- | -- | 0.0163 | 21.6 | 19.36 | 642 | 1.36e-06 | -- |
| 516.22 | 1.06 | 9.53 | 0.0148 | -- | -- | -- | -- | 0.218 | -- | -- | -- | -- | -- |
| 284.26 | 0.789 | 9.58 | -- | 1.97 | -- | -- | -- | 0.22 | 21.8 | -- | -- | -- | -- |
| 283.48 | 0.784 | 9.52 | -- | -- | -2.12 | -- | -- | 0.24 | -- | 33.09 | 490 | 0.184 | -- |
| 516.23 | 1.06 | 9.53 | -- | -- | -- | -- | -- | 0.216 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 206.59 | temperature | 20 | 720 | > th | dose independent | rect. | 22 | 11 |
| 4 | 208.27 | temperature | 20 | 720 | < th | dose independent | rect. | 23 | 10 |
| 23 | 209.74 | temperature | 20 | 720 | < th | dose independent | sin | 7 | NA |
| 41 | 211.27 | temperature | 20 | 720 | < th | dose independent | rect. | 5 | 2 |
| 47 | 211.58 | temperature | 20 | 720 | > th | dose independent | sin | 9 | NA |
| 52 | 211.92 | temperature | 25 | 720 | < th | dose dependent | rect. | 3 | 4 |
| 54 | 212.07 | temperature | 25 | 720 | < th | dose dependent | rect. | 1 | 7 |
| 64 | 212.40 | temperature | 20 | 720 | < th | dose dependent | rect. | 4 | 1 |
| 75 | 212.77 | temperature | 20 | 720 | > th | dose independent | rect. | 23 | 5 |
| 94 | 213.36 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 10 |
| 122 | 214.23 | temperature | 25 | 720 | < th | dose dependent | sin | 6 | NA |
| 129 | 214.36 | temperature | 30 | 270 | < th | dose dependent | rect. | 4 | 9 |
| 144 | 214.82 | temperature | 25 | 270 | < th | dose dependent | rect. | 7 | 2 |
| 173 | 215.50 | temperature | 20 | 720 | > th | dose independent | rect. | 16 | 17 |
| 174 | 215.52 | temperature | 20 | 720 | > th | dose independent | rect. | 23 | 18 |
| 431 | 220.93 | temperature | 20 | 720 | > th | dose independent | rect. | 5 | 4 |
| 443 | 221.07 | temperature | 15 | 720 | > th | dose dependent | rect. | 23 | 5 |
| 480 | 221.71 | temperature | 20 | 720 | < th | dose independent | rect. | 1 | 2 |
| 555 | 222.81 | temperature | 20 | 720 | > th | dose independent | rect. | 5 | 6 |
| 677 | 224.79 | temperature | 10 | 720 | > th | dose dependent | sin | 9 | NA |
| 773 | 226.03 | temperature | 15 | 720 | > th | dose dependent | rect. | 1 | 3 |
| 888 | 227.50 | temperature | 20 | 720 | > th | dose independent | rect. | 6 | 1 |
| 949 | 228.25 | temperature | 20 | 720 | > th | dose independent | no | NA | NA |
| 960 | 228.36 | temperature | 20 | 720 | < th | dose independent | no | NA | NA |
| 963 | 228.38 | temperature | 20 | 720 | < th | dose independent | rect. | 11 | 23 |
| 965 | 228.39 | temperature | 20 | 720 | > th | dose independent | rect. | 5 | 23 |