Os11g0475600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Hexose transporter.
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Os11g0475600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Hexose transporter.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 192.78 | 0.652 | 2.94 | 0.322 | 0.103 | 2.26 | 0.912 | 4.84 | 0.062 | 1.47 | 25.5 | 93 | 12.9 | 3.9 |
| 209.36 | 0.674 | 2.94 | 0.433 | 0.149 | 1.95 | 0.492 | -- | 0.0785 | 1.22 | 25.41 | 90 | 12.5 | 4.27 |
| 195.6 | 0.651 | 2.94 | 0.303 | 0.109 | 2.28 | -- | 4.55 | 0.0801 | 3.83 | 25.49 | 96 | 12.8 | 3.97 |
| 208.58 | 0.673 | 2.91 | 0.465 | 0.166 | 1.81 | -- | -- | 0.113 | 4.61 | 25.54 | 104 | 12.3 | 4.68 |
| 196.36 | 0.653 | 2.94 | 0.318 | -- | 2.22 | -- | 4.06 | 0.057 | -- | 25.45 | 98 | 12.7 | 4.08 |
| 236.87 | 0.722 | 2.94 | 0.363 | 0.00741 | -- | 0.795 | -- | 0.0234 | 21.4 | -- | -- | -- | -- |
| 239.12 | 0.724 | 2.94 | 0.336 | 0.0292 | -- | -- | -- | 0.0232 | 16.3 | -- | -- | -- | -- |
| 209.66 | 0.674 | 2.93 | 0.443 | -- | 1.67 | -- | -- | 0.0897 | -- | 25.43 | 117 | 12.1 | 4.73 |
| 213.21 | 0.68 | 2.94 | -- | 0.18 | 1.79 | -- | -- | 0.056 | 3.82 | 25.6 | 108 | 12 | 4.87 |
| 239.17 | 0.723 | 2.94 | 0.334 | -- | -- | -- | -- | 0.0224 | -- | -- | -- | -- | -- |
| 242.09 | 0.728 | 2.95 | -- | 0.0229 | -- | -- | -- | -0.0142 | 16.6 | -- | -- | -- | -- |
| 214.47 | 0.682 | 2.94 | -- | -- | 1.69 | -- | -- | 0.0452 | -- | 25.47 | 117 | 12.1 | 4.65 |
| 242.12 | 0.726 | 2.95 | -- | -- | -- | -- | -- | -0.0147 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 197.33 | temperature | 25.0 | 90 | < th | dose independent | rect. | 13 | 4 |
| 2 | 197.39 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 13 | 4 |
| 10 | 201.06 | temperature | 25.0 | 10 | < th | dose independent | rect. | 13 | 4 |
| 25 | 202.69 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 13 | 4 |
| 63 | 207.98 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 1 | 1 |
| 65 | 208.03 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 24 | 2 |
| 78 | 208.75 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 13 | 17 |
| 87 | 209.26 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 12 | 18 |
| 110 | 210.02 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 3 | 3 |
| 115 | 210.18 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 10 | 9 |
| 119 | 210.32 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 13 | 5 |
| 122 | 210.43 | atmosphere | 1005.0 | 90 | > th | dose dependent | rect. | 13 | 6 |
| 134 | 210.58 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 20 | 3 |
| 175 | 211.37 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 20 | 3 |
| 181 | 211.46 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 4 | 2 |
| 191 | 211.69 | temperature | 25.0 | 90 | < th | dose independent | rect. | 12 | 19 |
| 192 | 211.70 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 21 | 1 |
| 216 | 212.24 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 18 | 11 |
| 218 | 212.26 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 23 | 8 |
| 223 | 212.38 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 21 | 1 |
| 229 | 212.41 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 20 | 8 |
| 230 | 212.41 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 20 | 8 |
| 231 | 212.47 | wind | 9.0 | 4320 | < th | dose independent | rect. | 19 | 9 |
| 238 | 212.54 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 248 | 212.68 | temperature | 25.0 | 720 | < th | dose dependent | sin | 22 | NA |
| 259 | 212.80 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 20 | 9 |
| 261 | 212.82 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 17 | 1 |
| 265 | 212.84 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 18 | 11 |
| 277 | 212.95 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 20 | 2 |
| 290 | 213.04 | temperature | 25.0 | 10 | < th | dose independent | rect. | 13 | 17 |
| 293 | 213.10 | wind | 7.0 | 4320 | > th | dose independent | rect. | 20 | 8 |
| 298 | 213.11 | temperature | 20.0 | 1440 | > th | dose independent | sin | 13 | NA |
| 301 | 213.12 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 3 | 4 |
| 308 | 213.16 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 3 | 4 |
| 320 | 213.23 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 10 | 19 |
| 333 | 213.27 | wind | 9.0 | 4320 | < th | dose independent | rect. | 19 | 4 |
| 339 | 213.29 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 17 | 2 |
| 344 | 213.30 | wind | 7.0 | 10 | > th | dose independent | rect. | 13 | 2 |
| 346 | 213.30 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 17 | 2 |
| 371 | 213.35 | wind | 7.0 | 1440 | < th | dose independent | rect. | 8 | 1 |
| 391 | 213.39 | wind | 7.0 | 4320 | < th | dose independent | rect. | 20 | 2 |
| 395 | 213.40 | wind | 7.0 | 90 | > th | dose independent | rect. | 12 | 2 |
| 400 | 213.40 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 5 | 1 |
| 409 | 213.45 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 17 | 4 |
| 424 | 213.52 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 17 | 2 |
| 462 | 213.62 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 13 | 10 |
| 486 | 213.69 | wind | 7.0 | 4320 | > th | dose independent | rect. | 20 | 2 |
| 498 | 213.75 | temperature | 20.0 | 1440 | < th | dose independent | sin | 12 | NA |
| 513 | 213.81 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 11 | 18 |
| 542 | 213.90 | wind | 7.0 | 1440 | > th | dose independent | rect. | 8 | 1 |
| 608 | 214.08 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 13 | 10 |
| 621 | 214.12 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 24 | 22 |
| 624 | 214.13 | radiation | 20.0 | 1440 | > th | dose independent | rect. | 6 | 1 |
| 706 | 214.28 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 6 | 23 |
| 708 | 214.30 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 24 | 22 |
| 715 | 214.32 | atmosphere | 1005.0 | 270 | > th | dose dependent | rect. | 13 | 1 |
| 717 | 214.33 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 23 | 9 |
| 730 | 214.39 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 20 | 23 |
| 731 | 214.39 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 23 | 2 |
| 796 | 214.50 | temperature | 20.0 | 1440 | > th | dose independent | no | NA | NA |
| 929 | 214.71 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 10 | 11 |
| 945 | 214.75 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 10 | 9 |