Os11g0475500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os11g0475500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 96.21 | 0.461 | 11.9 | -1.21 | 1.04 | 2.62 | -2.21 | 3.33 | -0.305 | 15.7 | 9.897 | 288 | 5.85 | 19.1 |
| 101.35 | 0.469 | 12 | -1.47 | 0.827 | 3.09 | -1.39 | -- | -0.449 | 14.7 | 8.751 | 331 | 5.38 | 19.3 |
| 104.28 | 0.476 | 12 | -1.35 | 0.941 | 2.76 | -- | 2.18 | -0.405 | 15 | 6.639 | 318 | 5.35 | 19.8 |
| 99.46 | 0.464 | 12 | -1.52 | 0.865 | 2.98 | -- | -- | -0.359 | 13.8 | 2.73 | 391 | 4.82 | 19.5 |
| 124.43 | 0.52 | 12 | -1.38 | -- | 3.48 | -- | 1.07 | -0.285 | -- | -0.6077 | 354 | 5.18 | 18.2 |
| 165.06 | 0.602 | 12 | -1.13 | 2.72 | -- | -0.0154 | -- | -0.188 | 16.7 | -- | -- | -- | -- |
| 165.06 | 0.602 | 12 | -1.13 | 2.72 | -- | -- | -- | -0.188 | 16.7 | -- | -- | -- | -- |
| 119.98 | 0.51 | 12 | -1.54 | -- | 3.47 | -- | -- | -0.419 | -- | 2.406 | 380 | 4.43 | 19 |
| 155.15 | 0.58 | 12 | -- | 1.04 | 2.54 | -- | -- | -0.181 | 15.2 | 1.682 | 344 | 5.23 | 19.3 |
| 558.49 | 1.1 | 12 | -1.23 | -- | -- | -- | -- | -0.259 | -- | -- | -- | -- | -- |
| 198.48 | 0.659 | 12 | -- | 2.74 | -- | -- | -- | -0.0624 | 16.7 | -- | -- | -- | -- |
| 174.05 | 0.614 | 11.9 | -- | -- | 3.26 | -- | -- | -0.146 | -- | -7.258 | 413 | 4.93 | 17.4 |
| 598.38 | 1.14 | 11.9 | -- | -- | -- | -- | -- | -0.122 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 96.93 | temperature | 10 | 270 | > th | dose dependent | rect. | 6 | 19 |
| 2 | 97.55 | temperature | 10 | 270 | > th | dose dependent | rect. | 5 | 21 |
| 4 | 99.93 | temperature | 30 | 90 | < th | dose dependent | rect. | 1 | 22 |
| 7 | 100.25 | temperature | 10 | 270 | > th | dose dependent | rect. | 20 | 13 |
| 12 | 101.28 | temperature | 30 | 270 | < th | dose dependent | rect. | 23 | 21 |
| 41 | 107.55 | temperature | 15 | 270 | > th | dose dependent | rect. | 19 | 7 |
| 56 | 108.84 | temperature | 20 | 270 | > th | dose independent | rect. | 5 | 21 |
| 62 | 109.28 | temperature | 15 | 270 | > th | dose dependent | rect. | 18 | 21 |
| 68 | 109.57 | temperature | 20 | 270 | > th | dose independent | rect. | 20 | 15 |
| 105 | 111.02 | radiation | 10 | 43200 | < th | dose dependent | rect. | 22 | 5 |
| 111 | 111.13 | temperature | 20 | 270 | > th | dose independent | rect. | 19 | 7 |
| 144 | 112.73 | temperature | 20 | 270 | > th | dose independent | rect. | 20 | 17 |
| 182 | 113.96 | temperature | 20 | 270 | > th | dose independent | rect. | 19 | 20 |
| 183 | 113.98 | temperature | 30 | 270 | < th | dose dependent | sin | 9 | NA |
| 191 | 114.19 | temperature | 30 | 90 | < th | dose dependent | rect. | 15 | 16 |
| 198 | 114.39 | temperature | 20 | 10 | > th | dose independent | rect. | 23 | 16 |
| 209 | 114.67 | temperature | 30 | 270 | < th | dose dependent | rect. | 11 | 19 |
| 213 | 114.74 | temperature | 30 | 270 | < th | dose dependent | rect. | 13 | 17 |
| 225 | 114.89 | temperature | 30 | 90 | < th | dose dependent | sin | 7 | NA |
| 240 | 115.30 | temperature | 15 | 10 | > th | dose dependent | rect. | 7 | 20 |
| 242 | 115.33 | temperature | 30 | 270 | < th | dose dependent | rect. | 10 | 21 |
| 250 | 115.52 | temperature | 10 | 270 | > th | dose dependent | sin | 10 | NA |
| 273 | 115.93 | radiation | 10 | 43200 | < th | dose dependent | rect. | 24 | 3 |
| 296 | 116.50 | temperature | 20 | 30 | > th | dose dependent | rect. | 23 | 5 |
| 316 | 116.87 | temperature | 30 | 270 | < th | dose dependent | rect. | 23 | 10 |
| 361 | 117.60 | temperature | 30 | 90 | < th | dose dependent | rect. | 13 | 22 |
| 379 | 117.87 | temperature | 30 | 90 | < th | dose dependent | rect. | 15 | 20 |
| 384 | 117.90 | temperature | 30 | 10 | < th | dose dependent | rect. | 17 | 15 |
| 397 | 118.09 | temperature | 30 | 10 | < th | dose dependent | rect. | 15 | 17 |
| 414 | 118.36 | temperature | 20 | 10 | > th | dose independent | rect. | 23 | 18 |
| 436 | 118.55 | temperature | 20 | 30 | > th | dose dependent | rect. | 23 | 3 |
| 470 | 119.00 | temperature | 20 | 10 | > th | dose independent | rect. | 23 | 5 |
| 499 | 119.40 | temperature | 20 | 10 | > th | dose independent | rect. | 21 | 7 |
| 570 | 120.21 | temperature | 20 | 10 | > th | dose independent | rect. | 21 | 20 |
| 575 | 120.26 | temperature | 15 | 10 | > th | dose dependent | rect. | 23 | 16 |
| 625 | 120.73 | temperature | 30 | 10 | < th | dose dependent | rect. | 12 | 20 |
| 682 | 121.33 | temperature | 15 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 688 | 121.37 | temperature | 25 | 270 | < th | dose independent | rect. | 24 | 21 |
| 711 | 121.64 | temperature | 30 | 10 | < th | dose dependent | rect. | 12 | 22 |
| 762 | 122.18 | temperature | 15 | 10 | > th | dose dependent | rect. | 23 | 18 |
| 781 | 122.29 | temperature | 20 | 30 | > th | dose independent | rect. | 23 | 3 |
| 816 | 122.57 | temperature | 30 | 90 | < th | dose dependent | no | NA | NA |
| 835 | 122.73 | atmosphere | 995 | 270 | > th | dose dependent | rect. | 15 | 15 |
| 909 | 123.28 | temperature | 30 | 30 | < th | dose dependent | rect. | 17 | 23 |