Os11g0474400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os11g0474400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 73.79 | 0.404 | 7.85 | -1.82 | 1.01 | -1.5 | -0.39 | -0.433 | -0.129 | 15.3 | 25.7 | 42 | -- | -- |
| 74.15 | 0.401 | 7.85 | -1.85 | 1.02 | -1.45 | -0.352 | -- | -0.121 | 15.3 | 25.7 | 41 | -- | -- |
| 74.17 | 0.401 | 7.85 | -1.86 | 1.02 | -1.48 | -- | -0.199 | -0.133 | 15.3 | 25.69 | 43 | -- | -- |
| 74.23 | 0.401 | 7.86 | -1.88 | 1.01 | -1.46 | -- | -- | -0.138 | 15.3 | 25.7 | 41 | -- | -- |
| 111.98 | 0.493 | 7.9 | -2.11 | -- | -2.21 | -- | 0.0712 | -0.342 | -- | 28.35 | 49 | -- | -- |
| 105.85 | 0.482 | 7.79 | -1.54 | 1.33 | -- | -0.191 | -- | 0.169 | 15 | -- | -- | -- | -- |
| 105.97 | 0.482 | 7.79 | -1.55 | 1.33 | -- | -- | -- | 0.168 | 15 | -- | -- | -- | -- |
| 111.89 | 0.493 | 7.89 | -2.12 | -- | -2.2 | -- | -- | -0.317 | -- | 28.38 | 48 | -- | -- |
| 159.86 | 0.592 | 7.78 | -- | 1.2 | -0.741 | -- | -- | 0.202 | 15.2 | 25.7 | 41 | -- | -- |
| 207.49 | 0.673 | 7.79 | -1.6 | -- | -- | -- | -- | 0.134 | -- | -- | -- | -- | -- |
| 168.98 | 0.608 | 7.75 | -- | 1.36 | -- | -- | -- | 0.34 | 15 | -- | -- | -- | -- |
| 220.56 | 0.694 | 7.81 | -- | -- | -1.57 | -- | -- | 0.05 | -- | 29.4 | 10 | -- | -- |
| 275.26 | 0.774 | 7.75 | -- | -- | -- | -- | -- | 0.312 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 70.38 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 11 | 20 |
| 12 | 72.17 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 15 | 16 |
| 53 | 74.14 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 58 | 74.26 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 66 | 74.45 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 68 | 74.51 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 13 | 23 |
| 69 | 74.54 | temperature | 25.0 | 30 | < th | dose dependent | no | NA | NA |
| 72 | 74.56 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 15 | 23 |
| 73 | 74.58 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 75 | 74.67 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 80 | 74.70 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 109 | 75.35 | temperature | 20.0 | 270 | > th | dose independent | rect. | 6 | 19 |
| 113 | 75.50 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 153 | 76.29 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 6 | 19 |
| 158 | 76.35 | temperature | 20.0 | 10 | > th | dose independent | rect. | 7 | 21 |
| 226 | 77.22 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 18 | 8 |
| 254 | 77.75 | temperature | 20.0 | 10 | > th | dose independent | rect. | 9 | 19 |
| 300 | 78.15 | temperature | 20.0 | 10 | > th | dose independent | rect. | 9 | 17 |
| 328 | 78.47 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 7 | 21 |
| 336 | 78.61 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 3 |
| 337 | 78.61 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 3 |
| 369 | 78.97 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 3 |
| 384 | 79.14 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 3 |
| 398 | 79.28 | temperature | 25.0 | 10 | < th | dose dependent | sin | 18 | NA |
| 404 | 79.37 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 20 | 14 |
| 409 | 79.47 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 6 |
| 410 | 79.47 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 6 |
| 428 | 79.60 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 9 | 18 |
| 467 | 79.89 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 6 |
| 471 | 79.90 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 6 |
| 488 | 80.05 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 9 |
| 490 | 80.05 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 9 |
| 499 | 80.13 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 9 |
| 504 | 80.18 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 9 | 13 |
| 508 | 80.23 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 9 |
| 540 | 80.48 | temperature | 25.0 | 270 | < th | dose independent | rect. | 10 | 20 |
| 628 | 81.22 | wind | 9.0 | 14400 | < th | dose independent | rect. | 4 | 9 |
| 706 | 81.74 | temperature | 20.0 | 10 | > th | dose independent | rect. | 21 | 15 |
| 720 | 81.82 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 19 | 12 |
| 728 | 81.84 | temperature | 25.0 | 720 | < th | dose dependent | sin | 21 | NA |
| 765 | 82.04 | temperature | 20.0 | 10 | > th | dose independent | rect. | 21 | 17 |
| 796 | 82.19 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 6 | 19 |
| 824 | 82.32 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 825 | 82.32 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 1 |
| 842 | 82.45 | temperature | 20.0 | 90 | > th | dose independent | rect. | 21 | 16 |
| 843 | 82.45 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 861 | 82.59 | wind | 9.0 | 14400 | < th | dose independent | rect. | 5 | 7 |
| 863 | 82.60 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 864 | 82.60 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 886 | 82.71 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 4 | 9 |
| 910 | 82.78 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 11 | 12 |
| 917 | 82.82 | temperature | 20.0 | 10 | < th | dose independent | rect. | 9 | 22 |
| 982 | 83.08 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 1 | 12 |
| 993 | 83.13 | temperature | 30.0 | 90 | < th | dose dependent | sin | 9 | NA |