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Os11g0474100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 13 (0.0251) R2 : 0.788
β1 : -1.38 (0.0919) R2dD : 0.11 R2D : 0.11
β2 : 1.34 (0.0813) R2dC : 0.199 R2C : 0.445
β3 : -2.04 (0.12) R2dE : 0.212 R2E : 0.465
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.275 (0.0535) R2dN8 : 0.0166 R2N8 : 0.00363
σ : 0.468
deviance : 101.11
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_____
C
peak time of C : 17.3
E
wheather : wind
threshold : 3.661
memory length : 126
response mode : < th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 3.73
open length of G : 3.15

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = < th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
98.59 0.467 13 -1.44 1.32 -1.86 0.552 -1.09 -0.267 17.4 4.369 126 3.68 3.3
99.11 0.464 13 -1.39 1.34 -1.96 0.893 -- -0.265 17.4 3.934 126 3.73 3.15
98.99 0.463 13 -1.43 1.33 -1.9 -- -1.47 -0.284 17.3 4.219 128 3.63 3.28
101.11 0.468 13 -1.38 1.34 -2.04 -- -- -0.275 17.3 3.661 126 3.73 3.15
143.73 0.558 12.9 -1.43 -- -2.37 -- -0.883 -0.234 -- 8.256 117 3.3 4.04
159.66 0.592 13 -1.47 2.17 -- 1.34 -- -0.308 17.6 -- -- -- --
164.08 0.6 13 -1.47 2.18 -- -- -- -0.302 17.6 -- -- -- --
145 0.561 13 -1.33 -- -2.55 -- -- -0.243 -- 7.193 134 3.17 4.05
151.23 0.573 13 -- 1.31 -2.1 -- -- -0.156 17.3 3.679 129 3.62 3.25
411.06 0.947 13 -1.54 -- -- -- -- -0.355 -- -- -- -- --
221.33 0.696 13 -- 2.2 -- -- -- -0.138 17.5 -- -- -- --
193.35 0.648 12.9 -- -- -2.53 -- -- -0.118 -- 6.471 150 2.98 3.97
474.02 1.02 12.9 -- -- -- -- -- -0.183 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 102.56 wind 5.0 90 < th dose dependent rect. 4 3
5 104.46 wind 3.0 90 < th dose independent rect. 4 3
6 104.57 wind 7.0 270 < th dose dependent rect. 2 4
8 104.81 atmosphere 1015.0 90 < th dose independent rect. 7 21
10 105.26 temperature 10.0 90 > th dose dependent rect. 4 3
11 105.27 humidity 50.0 90 > th dose dependent rect. 4 3
14 105.59 temperature 20.0 90 > th dose independent rect. 7 21
15 105.68 atmosphere 1010.0 90 < th dose independent rect. 4 3
17 105.96 precipitation 0.1 90 < th dose independent rect. 4 3
18 105.96 precipitation 0.1 90 < th dose dependent rect. 4 3
19 105.97 precipitation 0.1 270 < th dose independent rect. 2 4
20 105.97 precipitation 0.1 270 < th dose dependent rect. 2 4
21 106.07 wind 9.0 90 < th dose independent rect. 7 21
23 106.14 wind 7.0 90 < th dose independent rect. 4 3
25 106.16 temperature 10.0 90 > th dose independent rect. 4 3
27 106.16 temperature 30.0 90 < th dose independent rect. 4 3
28 106.16 humidity 50.0 90 > th dose independent rect. 4 3
30 106.16 atmosphere 995.0 90 > th dose independent rect. 4 3
32 106.16 radiation 40.0 90 < th dose independent rect. 4 3
33 106.16 temperature 10.0 90 > th dose independent rect. 7 21
41 106.84 wind 3.0 270 < th dose independent rect. 2 4
43 107.06 temperature 10.0 90 > th dose dependent rect. 21 7
49 107.32 radiation 40.0 90 < th dose dependent rect. 4 3
51 107.47 atmosphere 1015.0 90 < th dose dependent rect. 4 3
56 107.92 temperature 10.0 270 > th dose independent rect. 2 4
58 107.92 temperature 30.0 270 < th dose independent rect. 2 4
59 107.92 humidity 50.0 270 > th dose independent rect. 2 4
62 107.92 atmosphere 995.0 270 > th dose independent rect. 2 4
63 107.92 atmosphere 1015.0 270 < th dose independent rect. 2 4
64 107.92 radiation 20.0 270 < th dose independent rect. 2 4
68 107.94 humidity 50.0 270 > th dose dependent rect. 2 4
70 108.00 precipitation 0.1 90 < th dose independent rect. 7 21
71 108.00 precipitation 0.1 90 < th dose dependent rect. 7 21
76 108.18 temperature 20.0 270 > th dose independent rect. 6 19
77 108.36 radiation 40.0 270 < th dose dependent rect. 2 4
90 108.89 temperature 10.0 270 > th dose dependent rect. 2 4
97 109.42 temperature 10.0 90 > th dose dependent rect. 7 21
100 109.74 temperature 10.0 270 > th dose dependent rect. 19 7
104 109.83 atmosphere 995.0 90 > th dose independent rect. 7 21
117 110.35 wind 9.0 270 < th dose independent rect. 5 22
118 110.41 temperature 15.0 270 > th dose dependent rect. 21 4
134 110.50 temperature 10.0 270 > th dose independent rect. 5 22
178 111.44 temperature 20.0 90 > th dose independent rect. 21 7
207 112.30 temperature 20.0 270 > th dose independent rect. 21 4
276 113.33 atmosphere 1015.0 270 < th dose dependent rect. 2 4
296 113.47 temperature 10.0 10 > th dose dependent rect. 5 2
317 113.66 wind 1.0 270 > th dose independent rect. 6 20
322 113.74 radiation 1.0 90 > th dose independent rect. 5 1
384 114.18 radiation 1.0 10 > th dose independent rect. 5 2
444 114.54 atmosphere 1015.0 90 < th dose independent rect. 21 7
449 114.62 humidity 50.0 10 > th dose dependent rect. 5 2
471 114.96 wind 9.0 10 < th dose independent rect. 7 22
472 114.98 precipitation 0.1 10 < th dose independent rect. 5 2
473 114.98 precipitation 0.1 10 < th dose dependent rect. 5 2
479 115.02 temperature 10.0 10 > th dose independent rect. 5 2
481 115.02 temperature 30.0 10 < th dose independent rect. 5 2
482 115.02 humidity 50.0 10 > th dose independent rect. 5 2
485 115.02 atmosphere 995.0 10 > th dose independent rect. 5 2
486 115.02 atmosphere 1015.0 10 < th dose independent rect. 5 2
487 115.02 radiation 20.0 10 < th dose independent rect. 5 2
490 115.02 temperature 10.0 10 > th dose independent rect. 7 22
601 115.96 temperature 20.0 270 > th dose independent rect. 19 7
602 115.97 temperature 15.0 270 > th dose dependent rect. 23 1
653 116.30 humidity 50.0 90 > th dose independent rect. 7 21
654 116.30 radiation 1.0 10 < th dose dependent sin 11 NA
659 116.32 radiation 1.0 270 < th dose dependent rect. 2 9
666 116.39 temperature 15.0 270 > th dose independent rect. 6 9
688 116.49 radiation 30.0 270 < th dose independent rect. 15 15
692 116.53 wind 9.0 270 < th dose independent rect. 6 9
703 116.68 wind 3.0 90 < th dose dependent rect. 4 15
704 116.69 precipitation 0.1 270 < th dose independent rect. 6 9
706 116.69 precipitation 0.1 270 < th dose dependent rect. 6 9
708 116.70 atmosphere 1015.0 270 < th dose independent rect. 6 9
709 116.70 temperature 10.0 270 > th dose independent rect. 15 15
724 116.74 radiation 1.0 270 < th dose independent rect. 2 9
729 116.76 wind 7.0 90 < th dose independent rect. 21 7
744 116.87 atmosphere 995.0 270 > th dose independent rect. 6 9
758 117.04 atmosphere 995.0 90 > th dose dependent rect. 4 3
769 117.13 temperature 10.0 90 > th dose independent rect. 21 7
770 117.13 temperature 30.0 90 < th dose independent rect. 21 7
771 117.13 humidity 50.0 90 > th dose independent rect. 21 7
774 117.13 atmosphere 995.0 90 > th dose independent rect. 21 7
775 117.13 radiation 1.0 90 < th dose independent rect. 21 7
780 117.13 temperature 10.0 90 > th dose independent rect. 4 17
781 117.13 atmosphere 1015.0 90 < th dose independent rect. 4 17
783 117.13 radiation 1.0 90 < th dose dependent rect. 21 7
796 117.16 radiation 40.0 270 < th dose dependent rect. 15 15
817 117.27 wind 3.0 90 < th dose dependent rect. 4 11
818 117.28 radiation 1.0 270 < th dose dependent rect. 2 16
819 117.30 radiation 1.0 10 < th dose independent sin 11 NA
820 117.32 wind 9.0 270 < th dose independent rect. 15 15
821 117.33 atmosphere 995.0 10 > th dose independent rect. 7 22
822 117.34 atmosphere 1015.0 270 < th dose independent rect. 19 7
842 117.52 precipitation 0.1 270 < th dose independent rect. 15 15
844 117.52 precipitation 0.1 270 < th dose dependent rect. 15 15
851 117.56 precipitation 0.1 90 < th dose independent rect. 21 7
853 117.56 precipitation 0.1 90 < th dose dependent rect. 21 7
854 117.57 atmosphere 1015.0 270 < th dose independent rect. 21 4
910 117.96 radiation 1.0 10 > th dose independent sin 11 NA
911 117.96 wind 9.0 90 < th dose independent rect. 4 17
987 118.37 wind 9.0 1440 < th dose independent rect. 5 3
988 118.37 temperature 10.0 1440 > th dose independent rect. 5 3
991 118.37 temperature 30.0 1440 < th dose independent rect. 5 3
995 118.37 humidity 50.0 1440 > th dose independent rect. 5 3
1000 118.37 atmosphere 995.0 1440 > th dose independent rect. 5 3