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Os11g0471700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description :


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.25 (0.0224) R2 : 0.771
β1 : -0.742 (0.082) R2dD : 0.0427 R2D : 0.0409
β2 : 2.07 (0.0548) R2dC : 0.715 R2C : 0.724
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.201 (0.0478) R2dN8 : 0.0119 R2N8 : 0.00545
σ : 0.421
deviance : 80.81
__
_____
C
peak time of C : 14.5
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
71.43 0.397 6.26 -0.676 1.65 -0.524 0.961 0.788 -0.192 15.3 8.497 11 -- --
73.84 0.4 6.26 -0.711 1.65 -0.516 0.301 -- -0.198 15.3 8.34 11 -- --
73.27 0.399 6.25 -0.681 1.68 -0.499 -- 0.362 -0.187 15.2 8.333 11 -- --
74.08 0.401 6.26 -0.71 1.67 -0.498 -- -- -0.199 15.2 8.332 11 -- --
97.88 0.461 6.23 -0.617 -- -1.66 -- 0.0929 -0.101 -- 4.82 272 -- --
80.74 0.421 6.25 -0.746 2.07 -- 0.148 -- -0.202 14.5 -- -- -- --
80.81 0.421 6.25 -0.742 2.07 -- -- -- -0.201 14.5 -- -- -- --
96.01 0.456 6.24 -0.689 -- -1.7 -- -- -0.212 -- 4.793 284 -- --
87.61 0.436 6.25 -- 1.69 -0.472 -- -- -0.167 15.2 8.28 12 -- --
332.55 0.852 6.26 -0.829 -- -- -- -- -0.252 -- -- -- -- --
95.32 0.457 6.23 -- 2.08 -- -- -- -0.118 14.5 -- -- -- --
111.22 0.491 6.25 -- -- -1.71 -- -- -0.176 -- 5.28 281 -- --
350.7 0.874 6.24 -- -- -- -- -- -0.16 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 62.38 radiation 30.0 270 < th dose independent rect. 15 14
2 62.50 wind 5.0 30 < th dose dependent rect. 2 7
4 62.72 precipitation 0.1 270 < th dose independent rect. 15 14
5 62.72 precipitation 0.1 270 < th dose dependent rect. 15 14
12 63.21 temperature 10.0 270 > th dose independent rect. 5 10
13 63.21 atmosphere 1015.0 270 < th dose independent rect. 5 10
14 63.21 temperature 10.0 270 > th dose independent rect. 15 14
15 63.25 precipitation 0.1 270 < th dose independent rect. 5 10
16 63.25 precipitation 0.1 270 < th dose dependent rect. 5 10
19 63.31 wind 9.0 270 < th dose independent rect. 5 10
22 63.41 radiation 40.0 270 < th dose dependent rect. 15 14
25 63.63 atmosphere 995.0 270 > th dose independent rect. 15 14
26 63.76 atmosphere 995.0 270 > th dose independent rect. 5 10
29 63.83 wind 9.0 270 < th dose independent rect. 15 14
32 63.93 precipitation 0.1 270 < th dose independent rect. 1 4
33 63.93 precipitation 0.1 270 < th dose dependent rect. 1 4
38 64.07 wind 1.0 270 > th dose independent rect. 5 10
39 64.10 humidity 50.0 270 > th dose independent rect. 5 10
41 64.18 wind 9.0 270 < th dose dependent rect. 1 4
44 64.34 wind 3.0 30 < th dose dependent rect. 2 10
46 64.40 wind 9.0 270 < th dose independent rect. 5 20
47 64.40 temperature 10.0 10 > th dose dependent rect. 22 4
54 64.48 precipitation 0.1 270 < th dose independent rect. 23 22
55 64.48 temperature 10.0 270 > th dose dependent rect. 1 5
56 64.48 precipitation 0.1 270 < th dose dependent rect. 23 22
67 64.62 precipitation 0.1 10 < th dose independent rect. 2 20
68 64.62 precipitation 0.1 10 < th dose dependent rect. 2 20
69 64.66 wind 7.0 270 < th dose independent rect. 1 4
74 64.70 radiation 1.0 270 < th dose independent rect. 1 4
77 64.71 radiation 10.0 270 < th dose dependent rect. 1 4
80 64.72 temperature 10.0 270 > th dose independent rect. 1 4
82 64.72 temperature 30.0 270 < th dose independent rect. 1 4
83 64.72 humidity 50.0 270 > th dose independent rect. 1 4
86 64.72 atmosphere 995.0 270 > th dose independent rect. 1 4
87 64.72 atmosphere 1010.0 270 < th dose independent rect. 1 4
92 64.72 temperature 10.0 270 > th dose independent rect. 5 20
99 64.76 wind 3.0 30 < th dose independent rect. 2 7
103 64.80 humidity 50.0 10 > th dose dependent rect. 22 4
111 64.91 temperature 10.0 270 > th dose dependent rect. 21 2
128 65.07 temperature 15.0 270 > th dose independent rect. 10 10
131 65.10 temperature 15.0 90 > th dose independent rect. 2 19
137 65.12 humidity 50.0 270 > th dose independent rect. 20 14
139 65.12 atmosphere 995.0 10 > th dose independent rect. 2 20
140 65.12 humidity 50.0 270 > th dose dependent rect. 1 4
144 65.14 atmosphere 1015.0 270 < th dose independent rect. 10 10
145 65.14 wind 9.0 270 < th dose independent rect. 20 14
146 65.14 temperature 10.0 270 > th dose independent rect. 20 14
147 65.14 atmosphere 995.0 270 > th dose independent rect. 20 14
151 65.22 humidity 50.0 270 > th dose dependent rect. 21 2
152 65.23 temperature 15.0 10 > th dose independent rect. 22 4
194 65.36 wind 7.0 90 < th dose independent rect. 21 5
195 65.36 precipitation 0.1 270 < th dose independent rect. 10 10
196 65.36 precipitation 0.1 270 < th dose dependent rect. 10 10
199 65.38 wind 7.0 10 < th dose independent rect. 22 4
202 65.38 temperature 30.0 10 < th dose independent rect. 22 4
203 65.38 humidity 50.0 10 > th dose independent rect. 22 4
206 65.38 atmosphere 995.0 10 > th dose independent rect. 22 4
207 65.38 radiation 1.0 10 < th dose independent rect. 22 4
212 65.38 precipitation 0.1 10 < th dose independent rect. 2 6
213 65.38 wind 1.0 270 > th dose independent rect. 20 14
214 65.38 temperature 10.0 10 > th dose independent rect. 2 20
216 65.38 atmosphere 1015.0 10 < th dose independent rect. 2 20
220 65.38 radiation 1.0 10 < th dose dependent rect. 22 4
225 65.38 precipitation 0.1 10 < th dose dependent rect. 2 6
230 65.40 atmosphere 995.0 270 > th dose independent rect. 10 10
253 65.44 temperature 10.0 10 > th dose dependent rect. 2 6
260 65.47 wind 1.0 270 > th dose independent rect. 10 10
264 65.48 wind 1.0 270 > th dose independent rect. 21 2
266 65.49 precipitation 0.1 270 < th dose independent rect. 5 20
267 65.49 precipitation 0.1 270 < th dose dependent rect. 5 20
270 65.52 humidity 80.0 90 > th dose independent rect. 21 5
273 65.53 wind 1.0 30 > th dose independent rect. 22 17
302 65.56 precipitation 0.1 10 < th dose independent rect. 22 4
308 65.56 precipitation 0.1 10 < th dose dependent rect. 22 4
312 65.58 wind 7.0 270 < th dose independent rect. 21 2
313 65.58 radiation 40.0 14400 < th dose dependent rect. 23 4
316 65.59 wind 9.0 10 < th dose independent rect. 2 20
320 65.60 radiation 10.0 10 < th dose independent rect. 2 20
324 65.63 temperature 15.0 270 > th dose independent rect. 21 2
326 65.63 wind 9.0 90 < th dose dependent rect. 2 19
334 65.67 temperature 10.0 1440 > th dose independent rect. 23 4
337 65.67 temperature 30.0 1440 < th dose independent rect. 23 4
341 65.67 humidity 50.0 1440 > th dose independent rect. 23 4
351 65.67 atmosphere 995.0 1440 > th dose independent rect. 23 4
352 65.67 radiation 1.0 1440 < th dose independent rect. 23 4
372 65.67 temperature 10.0 1440 > th dose independent rect. 3 20
375 65.67 radiation 1.0 1440 < th dose dependent rect. 23 4
425 65.71 temperature 30.0 270 < th dose independent rect. 21 2
426 65.71 humidity 50.0 270 > th dose independent rect. 21 2
429 65.71 atmosphere 995.0 270 > th dose independent rect. 21 2
430 65.71 radiation 1.0 270 < th dose independent rect. 21 2
436 65.71 temperature 10.0 270 > th dose independent rect. 23 22
437 65.71 radiation 1.0 270 < th dose dependent rect. 21 2
452 65.74 wind 9.0 10 < th dose dependent rect. 22 4
464 65.77 wind 3.0 30 < th dose dependent rect. 2 17
472 65.80 temperature 25.0 270 < th dose independent rect. 2 1
473 65.80 precipitation 0.1 270 < th dose independent rect. 21 2
477 65.80 precipitation 0.1 270 < th dose dependent rect. 21 2
478 65.80 temperature 10.0 10 > th dose dependent rect. 8 18
497 65.88 wind 9.0 270 < th dose dependent rect. 21 2
501 65.89 wind 3.0 30 < th dose dependent rect. 2 19
514 65.98 wind 9.0 270 < th dose independent rect. 10 10
520 65.98 humidity 50.0 270 > th dose dependent rect. 19 6
526 65.99 temperature 10.0 270 > th dose dependent rect. 19 6
529 66.01 humidity 50.0 270 > th dose independent rect. 15 14
530 66.01 atmosphere 995.0 270 > th dose independent rect. 24 21
543 66.05 wind 7.0 270 < th dose independent rect. 19 6
554 66.11 humidity 50.0 10 > th dose dependent rect. 2 7
562 66.14 radiation 40.0 10 < th dose independent rect. 2 6
569 66.15 radiation 10.0 270 < th dose dependent rect. 24 19
571 66.16 wind 1.0 270 > th dose independent rect. 6 18
577 66.19 precipitation 0.1 270 < th dose independent rect. 20 14
578 66.19 precipitation 0.1 270 < th dose dependent rect. 20 14
579 66.20 wind 9.0 10 < th dose independent rect. 8 18
592 66.24 temperature 10.0 10 > th dose independent rect. 2 6
594 66.24 temperature 30.0 10 < th dose independent rect. 2 6
595 66.24 humidity 50.0 10 > th dose independent rect. 2 6
597 66.24 atmosphere 995.0 10 > th dose independent rect. 2 6
598 66.24 atmosphere 1015.0 10 < th dose independent rect. 2 6
599 66.24 temperature 10.0 10 > th dose independent rect. 8 18
602 66.24 radiation 10.0 10 < th dose dependent rect. 2 20
631 66.35 temperature 10.0 270 > th dose independent rect. 19 6
632 66.35 temperature 30.0 270 < th dose independent rect. 19 6
633 66.35 humidity 50.0 270 > th dose independent rect. 19 6
634 66.35 atmosphere 995.0 270 > th dose independent rect. 19 6
635 66.35 radiation 1.0 270 < th dose independent rect. 19 6
644 66.35 atmosphere 1015.0 270 < th dose dependent rect. 2 3
646 66.35 radiation 1.0 270 < th dose dependent rect. 19 6
684 66.39 precipitation 0.1 10 < th dose independent rect. 8 18
685 66.39 precipitation 0.1 10 < th dose dependent rect. 8 18
730 66.46 wind 1.0 270 > th dose independent rect. 5 20
775 66.54 atmosphere 1015.0 10 < th dose independent rect. 22 4
777 66.54 temperature 30.0 270 < th dose independent rect. 20 14
803 66.59 radiation 10.0 270 < th dose independent rect. 24 19
818 66.61 radiation 40.0 30 < th dose dependent rect. 2 7
837 66.65 atmosphere 1015.0 270 < th dose independent rect. 24 21
845 66.67 wind 9.0 1440 < th dose independent rect. 3 6
846 66.67 temperature 10.0 1440 > th dose independent rect. 3 6
850 66.67 humidity 50.0 1440 > th dose independent rect. 3 6
852 66.67 atmosphere 995.0 1440 > th dose independent rect. 3 6
855 66.67 temperature 10.0 1440 > th dose independent rect. 9 18
903 66.71 wind 9.0 270 < th dose independent rect. 23 22
922 66.73 radiation 10.0 270 < th dose dependent rect. 1 12
946 66.75 radiation 1.0 270 < th dose dependent rect. 5 20
986 66.83 radiation 10.0 10 < th dose independent rect. 2 5