Os11g0471200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0471200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 100.78 | 0.472 | 2.89 | -0.00439 | 0.032 | -0.809 | -0.299 | 3.17 | 0.0771 | 6.76 | 50.53 | 8 | -- | -- |
| 104.26 | 0.479 | 2.88 | -0.00696 | 0.0309 | -0.294 | 0.424 | -- | 0.0703 | 22.7 | 52 | 7 | -- | -- |
| 100.52 | 0.467 | 2.89 | -0.0181 | 0.0431 | -0.786 | -- | 3.07 | 0.0786 | 5.82 | 50.47 | 6 | -- | -- |
| 104.52 | 0.476 | 2.88 | -0.0333 | 0.0432 | -0.355 | -- | -- | 0.0732 | 2.67 | 51 | 7 | -- | -- |
| 100.61 | 0.467 | 2.89 | -0.00189 | -- | -0.774 | -- | 3.04 | 0.0803 | -- | 50.49 | 6 | -- | -- |
| 105.53 | 0.482 | 2.89 | -0.00866 | 0.00346 | -- | 0.469 | -- | 0.0565 | 21.7 | -- | -- | -- | -- |
| 106.31 | 0.483 | 2.89 | -0.0277 | 0.0299 | -- | -- | -- | 0.0548 | 3.87 | -- | -- | -- | -- |
| 104.74 | 0.477 | 2.88 | -0.0256 | -- | -0.348 | -- | -- | 0.0708 | -- | 51.21 | 7 | -- | -- |
| 104.51 | 0.476 | 2.88 | -- | 0.0672 | -0.379 | -- | -- | 0.0735 | 2.93 | 51.52 | 7 | -- | -- |
| 106.36 | 0.482 | 2.89 | -0.0264 | -- | -- | -- | -- | 0.0556 | -- | -- | -- | -- | -- |
| 106.33 | 0.482 | 2.89 | -- | 0.0294 | -- | -- | -- | 0.0579 | 3.89 | -- | -- | -- | -- |
| 104.75 | 0.477 | 2.88 | -- | -- | -0.348 | -- | -- | 0.0735 | -- | 51.45 | 7 | -- | -- |
| 106.38 | 0.481 | 2.89 | -- | -- | -- | -- | -- | 0.0586 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 94.67 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 21 | 6 |
| 2 | 94.69 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 16 | 1 |
| 3 | 94.69 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 21 | 2 |
| 5 | 94.74 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 20 | 8 |
| 10 | 94.87 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 20 | 10 |
| 21 | 95.23 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 31 | 95.23 | humidity | 70.0 | 4320 | < th | dose dependent | rect. | 20 | 1 |
| 50 | 96.75 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 14 | 1 |
| 52 | 97.07 | humidity | 60.0 | 720 | > th | dose independent | rect. | 3 | 8 |
| 54 | 97.14 | humidity | 60.0 | 270 | < th | dose independent | rect. | 17 | 18 |
| 57 | 97.31 | radiation | 1.0 | 270 | < th | dose independent | rect. | 8 | 1 |
| 58 | 97.31 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 8 | 1 |
| 60 | 97.88 | humidity | 60.0 | 720 | > th | dose independent | rect. | 20 | 15 |
| 61 | 97.96 | atmosphere | 1010.0 | 10 | > th | dose dependent | rect. | 12 | 1 |
| 100 | 97.97 | humidity | 60.0 | 720 | < th | dose independent | rect. | 9 | 2 |
| 102 | 98.07 | humidity | 50.0 | 10 | > th | dose independent | sin | 7 | NA |
| 159 | 98.29 | humidity | 60.0 | 270 | < th | dose independent | sin | 10 | NA |
| 172 | 98.35 | humidity | 50.0 | 4320 | < th | dose independent | rect. | 16 | 1 |
| 208 | 98.46 | wind | 9.0 | 4320 | > th | dose independent | rect. | 14 | 1 |
| 211 | 98.53 | atmosphere | 1010.0 | 30 | > th | dose dependent | sin | 23 | NA |
| 325 | 98.62 | humidity | 60.0 | 270 | > th | dose independent | sin | 10 | NA |
| 337 | 98.64 | humidity | 90.0 | 10 | > th | dose independent | rect. | 13 | 1 |
| 346 | 98.64 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 13 | 1 |
| 489 | 98.77 | wind | 1.0 | 90 | < th | dose dependent | rect. | 12 | 1 |
| 538 | 99.03 | humidity | 60.0 | 270 | < th | dose dependent | sin | 9 | NA |
| 540 | 99.04 | humidity | 70.0 | 4320 | < th | dose dependent | rect. | 19 | 14 |
| 655 | 99.18 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 5 | 2 |
| 656 | 99.18 | humidity | 60.0 | 270 | < th | dose dependent | rect. | 17 | 19 |
| 664 | 99.32 | humidity | 60.0 | 270 | < th | dose dependent | rect. | 18 | 17 |
| 670 | 99.41 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 24 | 7 |
| 685 | 99.51 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 6 | 1 |
| 707 | 99.54 | humidity | 70.0 | 4320 | < th | dose dependent | rect. | 8 | 1 |
| 717 | 99.59 | wind | 9.0 | 4320 | < th | dose independent | rect. | 14 | 1 |
| 721 | 99.63 | wind | 9.0 | 1440 | < th | dose independent | rect. | 23 | 1 |
| 722 | 99.63 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 725 | 99.63 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 23 | 1 |
| 729 | 99.63 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 739 | 99.63 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 740 | 99.63 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 23 | 1 |
| 760 | 99.63 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 24 | 23 |
| 763 | 99.63 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 23 | 1 |
| 783 | 99.68 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 6 | 1 |
| 785 | 99.69 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 4 | 3 |
| 788 | 99.74 | temperature | 25.0 | 30 | > th | dose independent | rect. | 22 | 1 |
| 795 | 99.79 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 22 | 1 |
| 796 | 99.79 | radiation | 10.0 | 720 | > th | dose dependent | rect. | 6 | 1 |
| 809 | 99.80 | humidity | 90.0 | 30 | < th | dose independent | rect. | 22 | 1 |
| 814 | 99.81 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 22 | 1 |
| 824 | 99.84 | radiation | 20.0 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 880 | 99.84 | radiation | 20.0 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 934 | 99.88 | wind | 1.0 | 90 | < th | dose independent | rect. | 12 | 1 |
| 935 | 99.88 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 22 | 1 |
| 946 | 99.91 | humidity | 60.0 | 4320 | > th | dose independent | rect. | 18 | 16 |
| 949 | 99.92 | wind | 9.0 | 30 | < th | dose independent | rect. | 23 | 23 |
| 953 | 99.93 | wind | 3.0 | 30 | < th | dose independent | rect. | 22 | 1 |
| 957 | 99.94 | humidity | 60.0 | 4320 | > th | dose independent | rect. | 18 | 1 |
| 958 | 99.94 | humidity | 80.0 | 30 | > th | dose independent | rect. | 22 | 1 |
| 961 | 99.96 | humidity | 60.0 | 720 | < th | dose dependent | rect. | 9 | 2 |
| 972 | 99.97 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 22 | 1 |
| 974 | 99.97 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 22 | 1 |
| 984 | 100.01 | wind | 1.0 | 30 | > th | dose independent | rect. | 22 | 1 |
| 998 | 100.02 | wind | 7.0 | 30 | < th | dose dependent | rect. | 22 | 1 |